Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30946
         (625 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          24   1.0  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   1.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   4.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   4.2  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   7.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.8  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 248 TSRSPSLKEKQSFKLWW*YKISIYF 322
           TS++   ++K    +WW YK  +YF
Sbjct: 56  TSKAGIHRKKVLLSVWWDYKGIVYF 80


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 248 TSRSPSLKEKQSFKLWW*YKISIYF 322
           TS++   ++K    +WW YK  +YF
Sbjct: 178 TSKAGIHRKKVLLSVWWDYKGIVYF 202


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +2

Query: 521 CTVLVLFER--RYFAATVMLCINIAFFTFIIKP 613
           C ++  F     Y ++ V++CI++  +  +IKP
Sbjct: 111 CRIMAFFRMFGLYLSSFVLVCISMDRYYAVIKP 143


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 208 DLLQQWSHLRQSHQNR 161
           D+L+ W +L   H NR
Sbjct: 266 DVLRSWRNLMDEHSNR 281


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 248 TSRSPSLKEKQSFKLWW*YKISIYF 322
           TS++   ++K    +WW +K  +YF
Sbjct: 57  TSKAGIHRKKVLLLVWWDHKGIVYF 81


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 215 ELPALNMVLPDTSRSPSLKEKQSFKLW 295
           +LP   + LPD S    L  +Q F L+
Sbjct: 59  KLPVKAITLPDLSIPMQLGRRQPFSLF 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,597
Number of Sequences: 438
Number of extensions: 2785
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)