Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30944
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       25   0.62 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.8  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 490 VSARVPHGDAVHGEYTLLEAD-GSVRKVEYTAD 585
           V  R   G  V GEY ++  D GS+R V YTAD
Sbjct: 207 VEERTSDGFIV-GEYGVVSHDDGSLRGVRYTAD 238


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -3

Query: 460 GVSEVVFRVSIFFF---MVAGDKYFV 392
           GVS VV  ++IFFF   + AG+ YF+
Sbjct: 532 GVSFVVIVITIFFFTANVQAGELYFM 557


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = -3

Query: 460 GVSEVVFRVSIFFF---MVAGDKYFV 392
           GVS VV  ++IFFF   + AG+ YF+
Sbjct: 257 GVSFVVIVITIFFFTANVQAGELYFM 282


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = -2

Query: 524 CTASPCGTRAETCCRHCVRQPRSKRSRI*GEH 429
           C   PC    E+C    V   R+    I GEH
Sbjct: 10  CDNPPCDDEVESCIAVGVGSGRNSAPSICGEH 41


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 78   CGSGKRPAVATASTMLKAT 22
            CG GK P + T +  L+ T
Sbjct: 2672 CGCGKHPLLKTLNNELRGT 2690


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 521 CTANTPCWKL 550
           CTA+T CW++
Sbjct: 528 CTASTRCWEV 537


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,699
Number of Sequences: 336
Number of extensions: 1959
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)