Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30942
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.9  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -2

Query: 363 FWISIAPRYSHFQNLIDGLYV*LFWIPWFLFRPHSALS 250
           FWI +AP  S+F+   +  Y  + +    +F  +SA++
Sbjct: 313 FWIIVAPAGSNFEIGFENYYN-ILYFSRIMFHINSAVN 349


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 715 ACFQLSQTLTFRYSHPW 665
           A +++ Q LT+R   PW
Sbjct: 202 AVYKIGQLLTYRAPRPW 218


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 715 ACFQLSQTLTFRYSHPW 665
           A +++ Q LT+R   PW
Sbjct: 202 AVYKIGQLLTYRAPRPW 218


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 70  PPPEPFNDGKTQSDHTDDEEKEDIVNIP 153
           PPP P  D  +     + + K+   N+P
Sbjct: 214 PPPPPEEDDDSNIPQNNPKNKQHNFNLP 241


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +1

Query: 82  PFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLRRHEIDKN 228
           PF  G  ++  +  + K+ +   P+     KS + +P P L  +E  +N
Sbjct: 195 PFAKGFRENGKSSAKRKQLVSEHPDSPNSKKSATPSPPPQLEVNERKEN 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,759
Number of Sequences: 336
Number of extensions: 2146
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)