Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30942
(733 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase D... 31 5.6
AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein. 31 5.6
CR628411-1|CAM12829.1| 520|Homo sapiens cyclin L2 protein. 30 7.4
BC071622-1|AAH71622.1| 298|Homo sapiens CCNL2 protein protein. 30 7.4
AL834432-1|CAD39092.1| 154|Homo sapiens hypothetical protein pr... 30 7.4
AL391244-4|CAI22660.2| 520|Homo sapiens cyclin L2 protein. 30 7.4
AF251294-1|AAG44594.1| 348|Homo sapiens hCLA-iso protein. 30 7.4
AF087903-1|AAP97201.1| 197|Homo sapiens Paneth cell enhanced ex... 30 7.4
X69962-1|CAA49586.1| 632|Homo sapiens protein ( H.sapiens FMR-1... 30 9.8
S65791-1|AAB28395.2| 632|Homo sapiens FMR1 protein. 30 9.8
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 30 9.8
L29074-1|AAB18833.1| 632|Homo sapiens fragile X mental retardat... 30 9.8
DQ368679-1|ABC86690.1| 1206|Homo sapiens RACK7 isoform k protein. 30 9.8
DQ368678-1|ABC86689.1| 1136|Homo sapiens RACK7 isoform j protein. 30 9.8
DQ368674-1|ABC86685.1| 1181|Homo sapiens RACK7 isoform f protein. 30 9.8
DQ368673-1|ABC86684.1| 1234|Homo sapiens RACK7 isoform e protein. 30 9.8
DQ368672-1|ABC86683.1| 1163|Homo sapiens RACK7 isoform d protein. 30 9.8
DQ368671-1|ABC86682.1| 1135|Homo sapiens RACK7 isoform c protein. 30 9.8
DQ368670-1|ABC86681.1| 1160|Homo sapiens RACK7 isoform b protein. 30 9.8
DQ368669-1|ABC86680.1| 1188|Homo sapiens RACK7 isoform a protein. 30 9.8
DQ082999-1|AAY85631.1| 1107|Homo sapiens transcriptional repress... 30 9.8
DQ082998-1|AAY85630.1| 1234|Homo sapiens transcriptional repress... 30 9.8
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 30 9.8
BC146802-1|AAI46803.1| 788|Homo sapiens ZMYND8 protein protein. 30 9.8
BC105053-1|AAI05054.1| 643|Homo sapiens praja 1 protein. 30 9.8
BC105051-1|AAI05052.1| 643|Homo sapiens praja 1 protein. 30 9.8
BC075803-1|AAH75803.1| 643|Homo sapiens praja 1 protein. 30 9.8
BC048323-1|AAH48323.1| 384|Homo sapiens PJA1 protein protein. 30 9.8
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 30 9.8
BC030721-1|AAH30721.2| 1094|Homo sapiens ZMYND8 protein protein. 30 9.8
AL390212-2|CAI20089.1| 1186|Homo sapiens protein kinase C bindin... 30 9.8
AL390212-1|CAI20088.1| 1115|Homo sapiens protein kinase C bindin... 30 9.8
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 30 9.8
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 30 9.8
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 30 9.8
AL157699-3|CAI41605.1| 455|Homo sapiens praja 1 protein. 30 9.8
AL157699-2|CAI41604.1| 643|Homo sapiens praja 1 protein. 30 9.8
AL157699-1|CAM24741.1| 588|Homo sapiens praja 1 protein. 30 9.8
AL049540-4|CAI23169.1| 1186|Homo sapiens protein kinase C bindin... 30 9.8
AL049540-3|CAI23168.1| 1115|Homo sapiens protein kinase C bindin... 30 9.8
AL031666-3|CAI21842.1| 1186|Homo sapiens protein kinase C bindin... 30 9.8
AL031666-2|CAI21840.1| 1115|Homo sapiens protein kinase C bindin... 30 9.8
AK021892-1|BAB13928.1| 361|Homo sapiens protein ( Homo sapiens ... 30 9.8
AF454056-1|AAL50790.1| 995|Homo sapiens se14-3r protein protein. 30 9.8
AF273045-1|AAG34905.1| 764|Homo sapiens CTCL tumor antigen se14... 30 9.8
AF264620-1|AAM53040.1| 455|Homo sapiens PRAJA1BETA protein. 30 9.8
AF262024-1|AAM53039.1| 643|Homo sapiens PJA1 protein. 30 9.8
AB209188-1|BAD92425.1| 527|Homo sapiens fragile X mental retard... 30 9.8
AB032951-1|BAA86439.1| 1205|Homo sapiens KIAA1125 protein protein. 30 9.8
>BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase DNA
binding protein 1 protein.
Length = 1709
Score = 30.7 bits (66), Expect = 5.6
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 82 PFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLR-RHEIDKNKKSDEVSGKS 258
P + + + +E E+I +P +R +K +S S R R SD +S
Sbjct: 1048 PEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGK 1107
Query: 259 RMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
R + + +PR N+K + R +SY+
Sbjct: 1108 RPKKRGRPRTIPRENIKGFSDAEIRRFIKSYK 1139
>AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein.
Length = 1709
Score = 30.7 bits (66), Expect = 5.6
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +1
Query: 82 PFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLR-RHEIDKNKKSDEVSGKS 258
P + + + +E E+I +P +R +K +S S R R SD +S
Sbjct: 1048 PEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISEGK 1107
Query: 259 RMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
R + + +PR N+K + R +SY+
Sbjct: 1108 RPKKRGRPRTIPRENIKGFSDAEIRRFIKSYK 1139
>CR628411-1|CAM12829.1| 520|Homo sapiens cyclin L2 protein.
Length = 520
Score = 30.3 bits (65), Expect = 7.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRN-PKELNVKPINQILKVR 336
+ YS+S SR+ SP R+ + + +SR R+ PR P+ K ++I R
Sbjct: 389 QSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKG-SEIRGSR 447
Query: 337 VARSYRNPKVSPKSSVRRRVHLREIRNSKKRA 432
++ + P+ KS R R R S++RA
Sbjct: 448 KSKDCKYPQKPHKS--RSRSSSRSRSRSRERA 477
>BC071622-1|AAH71622.1| 298|Homo sapiens CCNL2 protein protein.
Length = 298
Score = 30.3 bits (65), Expect = 7.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRN-PKELNVKPINQILKVR 336
+ YS+S SR+ SP R+ + + +SR R+ PR P+ K ++I R
Sbjct: 167 QSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKG-SEIRGSR 225
Query: 337 VARSYRNPKVSPKSSVRRRVHLREIRNSKKRA 432
++ + P+ KS R R R S++RA
Sbjct: 226 KSKDCKYPQKPHKS--RSRSSSRSRSRSRERA 255
>AL834432-1|CAD39092.1| 154|Homo sapiens hypothetical protein
protein.
Length = 154
Score = 30.3 bits (65), Expect = 7.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRN-PKELNVKPINQILKVR 336
+ YS+S SR+ SP R+ + + +SR R+ PR P+ K ++I R
Sbjct: 23 QSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKG-SEIRGSR 81
Query: 337 VARSYRNPKVSPKSSVRRRVHLREIRNSKKRA 432
++ + P+ KS R R R S++RA
Sbjct: 82 KSKDCKYPQKPHKS--RSRSSSRSRSRSRERA 111
>AL391244-4|CAI22660.2| 520|Homo sapiens cyclin L2 protein.
Length = 520
Score = 30.3 bits (65), Expect = 7.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRN-PKELNVKPINQILKVR 336
+ YS+S SR+ SP R+ + + +SR R+ PR P+ K ++I R
Sbjct: 389 QSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKG-SEIRGSR 447
Query: 337 VARSYRNPKVSPKSSVRRRVHLREIRNSKKRA 432
++ + P+ KS R R R S++RA
Sbjct: 448 KSKDCKYPQKPHKS--RSRSSSRSRSRSRERA 477
>AF251294-1|AAG44594.1| 348|Homo sapiens hCLA-iso protein.
Length = 348
Score = 30.3 bits (65), Expect = 7.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRN-PKELNVKPINQILKVR 336
+ YS+S SR+ SP R+ + + +SR R+ PR P+ K ++I R
Sbjct: 217 QSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKG-SEIRGSR 275
Query: 337 VARSYRNPKVSPKSSVRRRVHLREIRNSKKRA 432
++ + P+ KS R R R S++RA
Sbjct: 276 KSKDCKYPQKPHKS--RSRSSSRSRSRSRERA 305
>AF087903-1|AAP97201.1| 197|Homo sapiens Paneth cell enhanced
expression protein protein.
Length = 197
Score = 30.3 bits (65), Expect = 7.4
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRN-PKELNVKPINQILKVR 336
+ YS+S SR+ SP R+ + + +SR R+ PR P+ K ++I R
Sbjct: 66 QSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRSAPYKG-SEIRGSR 124
Query: 337 VARSYRNPKVSPKSSVRRRVHLREIRNSKKRA 432
++ + P+ KS R R R S++RA
Sbjct: 125 KSKDCKYPQKPHKS--RSRSSSRSRSRSRERA 154
>X69962-1|CAA49586.1| 632|Homo sapiens protein ( H.sapiens FMR-1
mRNA. ).
Length = 632
Score = 29.9 bits (64), Expect = 9.8
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Frame = +1
Query: 79 EPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLR---RHEIDKNKKSDEVS 249
E N +T+SDH D E D P E L R R + + +
Sbjct: 495 EASNASETESDHRD--ELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGGRGRGGGFKG 552
Query: 250 GKSRMRTK*KPRNPKELNVKPINQILKVRV----ARSYRNPKVSPKSSVRRRVHLREIRN 417
RT +PRNP+E + + L++RV RS + SS R+ + RN
Sbjct: 553 NDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKDRN 612
Query: 418 SKK 426
KK
Sbjct: 613 QKK 615
>S65791-1|AAB28395.2| 632|Homo sapiens FMR1 protein.
Length = 632
Score = 29.9 bits (64), Expect = 9.8
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Frame = +1
Query: 79 EPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLR---RHEIDKNKKSDEVS 249
E N +T+SDH D E D P E L R R + + +
Sbjct: 495 EASNASETESDHRD--ELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGGRGRGGGFKG 552
Query: 250 GKSRMRTK*KPRNPKELNVKPINQILKVRV----ARSYRNPKVSPKSSVRRRVHLREIRN 417
RT +PRNP+E + + L++RV RS + SS R+ + RN
Sbjct: 553 NDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKDRN 612
Query: 418 SKK 426
KK
Sbjct: 613 QKK 615
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSD-EVSGKSRMRTK*KPRNPKE 297
R + LSR+PSP RRH+ +K K D E S R R+ K + K+
Sbjct: 359 RSPKRKLSRSPSP--RRHKKEKKKDKDKERSRDERERSTSKKKKSKD 403
>L29074-1|AAB18833.1| 632|Homo sapiens fragile X mental retardation
syndrome protein protein.
Length = 632
Score = 29.9 bits (64), Expect = 9.8
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Frame = +1
Query: 79 EPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLR---RHEIDKNKKSDEVS 249
E N +T+SDH D E D P E L R R + + +
Sbjct: 495 EASNASETESDHRD--ELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGGRGRGGGFKG 552
Query: 250 GKSRMRTK*KPRNPKELNVKPINQILKVRV----ARSYRNPKVSPKSSVRRRVHLREIRN 417
RT +PRNP+E + + L++RV RS + SS R+ + RN
Sbjct: 553 NDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKDRN 612
Query: 418 SKK 426
KK
Sbjct: 613 QKK 615
>DQ368679-1|ABC86690.1| 1206|Homo sapiens RACK7 isoform k protein.
Length = 1206
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 506 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 562
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 563 VPLISPKRQIRSRFQL 578
>DQ368678-1|ABC86689.1| 1136|Homo sapiens RACK7 isoform j protein.
Length = 1136
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 481 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 537
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 538 VPLISPKRQIRSRFQL 553
>DQ368674-1|ABC86685.1| 1181|Homo sapiens RACK7 isoform f protein.
Length = 1181
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 481 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 537
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 538 VPLISPKRQIRSRFQL 553
>DQ368673-1|ABC86684.1| 1234|Homo sapiens RACK7 isoform e protein.
Length = 1234
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 506 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 562
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 563 VPLISPKRQIRSRFQL 578
>DQ368672-1|ABC86683.1| 1163|Homo sapiens RACK7 isoform d protein.
Length = 1163
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 481 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 537
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 538 VPLISPKRQIRSRFQL 553
>DQ368671-1|ABC86682.1| 1135|Homo sapiens RACK7 isoform c protein.
Length = 1135
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 481 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 537
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 538 VPLISPKRQIRSRFQL 553
>DQ368670-1|ABC86681.1| 1160|Homo sapiens RACK7 isoform b protein.
Length = 1160
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 506 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 562
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 563 VPLISPKRQIRSRFQL 578
>DQ368669-1|ABC86680.1| 1188|Homo sapiens RACK7 isoform a protein.
Length = 1188
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 506 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 562
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 563 VPLISPKRQIRSRFQL 578
>DQ082999-1|AAY85631.1| 1107|Homo sapiens transcriptional repressor
BSR/RACK7/PRKCBP1 isoform o protein.
Length = 1107
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 506 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 562
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 563 VPLISPKRQIRSRFQL 578
>DQ082998-1|AAY85630.1| 1234|Homo sapiens transcriptional repressor
BSR/RACK7/PRKCBP1 isoform m protein.
Length = 1234
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 506 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 562
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 563 VPLISPKRQIRSRFQL 578
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSD-EVSGKSRMRTK*KPRNPKE 297
R + LSR+PSP RRH+ +K K D E S R R+ K + K+
Sbjct: 207 RSPKRKLSRSPSP--RRHKKEKKKDKDKERSRDERERSTSKKKKSKD 251
>BC146802-1|AAI46803.1| 788|Homo sapiens ZMYND8 protein protein.
Length = 788
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 481 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 537
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 538 VPLISPKRQIRSRFQL 553
>BC105053-1|AAI05054.1| 643|Homo sapiens praja 1 protein.
Length = 643
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 444 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 485
>BC105051-1|AAI05052.1| 643|Homo sapiens praja 1 protein.
Length = 643
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 444 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 485
>BC075803-1|AAH75803.1| 643|Homo sapiens praja 1 protein.
Length = 643
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 444 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 485
>BC048323-1|AAH48323.1| 384|Homo sapiens PJA1 protein protein.
Length = 384
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 185 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 226
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSD-EVSGKSRMRTK*KPRNPKE 297
R + LSR+PSP RRH+ +K K D E S R R+ K + K+
Sbjct: 359 RSPKRKLSRSPSP--RRHKKEKKKDKDKERSRDERERSTSKKKKSKD 403
>BC030721-1|AAH30721.2| 1094|Homo sapiens ZMYND8 protein protein.
Length = 1094
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 412 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 468
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 469 VPLISPKRQIRSRFQL 484
>AL390212-2|CAI20089.1| 1186|Homo sapiens protein kinase C binding
protein 1 protein.
Length = 1186
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 486 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 542
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 543 VPLISPKRQIRSRFQL 558
>AL390212-1|CAI20088.1| 1115|Homo sapiens protein kinase C binding
protein 1 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 461 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 517
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 518 VPLISPKRQIRSRFQL 533
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSD-EVSGKSRMRTK*KPRNPKE 297
R + LSR+PSP RRH+ +K K D E S R R+ K + K+
Sbjct: 299 RSPKRKLSRSPSP--RRHKKEKKKDKDKERSRDERERSTSKKKKSKD 343
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSD-EVSGKSRMRTK*KPRNPKE 297
R + LSR+PSP RRH+ +K K D E S R R+ K + K+
Sbjct: 359 RSPKRKLSRSPSP--RRHKKEKKKDKDKERSRDERERSTSKKKKSKD 403
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 160 REYSKSLSRTPSPFLRRHEIDKNKKSD-EVSGKSRMRTK*KPRNPKE 297
R + LSR+PSP RRH+ +K K D E S R R+ K + K+
Sbjct: 359 RSPKRKLSRSPSP--RRHKKEKKKDKDKERSRDERERSTSKKKKSKD 403
>AL157699-3|CAI41605.1| 455|Homo sapiens praja 1 protein.
Length = 455
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 256 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 297
>AL157699-2|CAI41604.1| 643|Homo sapiens praja 1 protein.
Length = 643
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 444 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 485
>AL157699-1|CAM24741.1| 588|Homo sapiens praja 1 protein.
Length = 588
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 389 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 430
>AL049540-4|CAI23169.1| 1186|Homo sapiens protein kinase C binding
protein 1 protein.
Length = 1186
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 486 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 542
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 543 VPLISPKRQIRSRFQL 558
>AL049540-3|CAI23168.1| 1115|Homo sapiens protein kinase C binding
protein 1 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 461 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 517
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 518 VPLISPKRQIRSRFQL 533
>AL031666-3|CAI21842.1| 1186|Homo sapiens protein kinase C binding
protein 1 protein.
Length = 1186
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 486 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 542
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 543 VPLISPKRQIRSRFQL 558
>AL031666-2|CAI21840.1| 1115|Homo sapiens protein kinase C binding
protein 1 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 461 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 517
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 518 VPLISPKRQIRSRFQL 533
>AK021892-1|BAB13928.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ11830 fis, clone HEMBA1006559, moderately
similar to Mus musculus PRAJA1 (Praja1) mRNA. ).
Length = 361
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 162 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 203
>AF454056-1|AAL50790.1| 995|Homo sapiens se14-3r protein protein.
Length = 995
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 341 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 397
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 398 VPLISPKRQIRSRFQL 413
>AF273045-1|AAG34905.1| 764|Homo sapiens CTCL tumor antigen se14-3
protein.
Length = 764
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 110 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 166
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 167 VPLISPKRQIRSRFQL 182
>AF264620-1|AAM53040.1| 455|Homo sapiens PRAJA1BETA protein.
Length = 455
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 256 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 297
>AF262024-1|AAM53039.1| 643|Homo sapiens PJA1 protein.
Length = 643
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 142 VNIPNLREYSKSLSRTPSPFLRRHEIDKNKKSDEVSGKSRMR 267
V P+L+E SL P+L+ HE D + + D SG M+
Sbjct: 444 VREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQ 485
>AB209188-1|BAD92425.1| 527|Homo sapiens fragile X mental
retardation 1 variant protein.
Length = 527
Score = 29.9 bits (64), Expect = 9.8
Identities = 33/123 (26%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Frame = +1
Query: 79 EPFNDGKTQSDHTDDEEKEDIVNIPNLREYSKSLSRTPSPFLR---RHEIDKNKKSDEVS 249
E N +T+SDH D E D P E L R R + + +
Sbjct: 390 EASNASETESDHRD--ELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGGRGRGGGFKG 447
Query: 250 GKSRMRTK*KPRNPKELNVKPINQILKVRV----ARSYRNPKVSPKSSVRRRVHLREIRN 417
RT +PRNP+E + + L++RV RS + SS R+ + RN
Sbjct: 448 NDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKDRN 507
Query: 418 SKK 426
KK
Sbjct: 508 QKK 510
>AB032951-1|BAA86439.1| 1205|Homo sapiens KIAA1125 protein protein.
Length = 1205
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +1
Query: 175 SLSRTPSPFLRRHEIDKNKKSDEVSGKSRMRTK*KPRNPKELNVKPINQILKVRVARSYR 354
SLS +P PF + K+D+ S + R+ E+++K +++ ++ +S
Sbjct: 505 SLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQ---QQSTP 561
Query: 355 NPKVSPKSSVRRRVHL 402
P +SPK +R R L
Sbjct: 562 VPLISPKRQIRSRFQL 577
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,863,759
Number of Sequences: 237096
Number of extensions: 1287751
Number of successful extensions: 4334
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 4027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4323
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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