Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30941
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    47   1e-07
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    47   1e-07
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    46   3e-07
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.89 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   6.3  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   6.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.3  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.3  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 47.2 bits (107), Expect = 1e-07
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +1

Query: 1   PKVQQLVKEFFNGKEPSRGINPDE 72
           PKVQQL+ E+FNGKEP R INPDE
Sbjct: 172 PKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 47.2 bits (107), Expect = 1e-07
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +1

Query: 1   PKVQQLVKEFFNGKEPSRGINPDE 72
           PKVQQL+ E+FNGKEP R INPDE
Sbjct: 172 PKVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 46.4 bits (105), Expect = 3e-07
 Identities = 18/24 (75%), Positives = 23/24 (95%)
 Frame = +1

Query: 1   PKVQQLVKEFFNGKEPSRGINPDE 72
           PK+QQL+K+FF+GKE +RGINPDE
Sbjct: 171 PKIQQLIKDFFDGKELNRGINPDE 194


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = -2

Query: 506 IFRCQSVLVISDYNFFSVSCSL----IFSRYLQNTVGI--NFECDFN 384
           +F    + V++  +FFSV CS+    + +  L    G   +F+CD N
Sbjct: 334 VFTAMGLYVLNMEHFFSVKCSIQSESLLNDILFPVAGFISDFDCDIN 380


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 588 SKVMLTQSKTNFRIRKNLVLRLL 656
           S+ ML Q+K    IRKNLV + L
Sbjct: 388 SREMLQQNKILKVIRKNLVKKCL 410


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 207 NEFGHHSTDSFNTHGQRVDI 148
           +E G+H+ +S +  G+ VDI
Sbjct: 41  DEEGYHTPESLHYEGRAVDI 60


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -3

Query: 676  HLCLVVISNLSTKFFLILKLVFD*VSITFELVSRLHS 566
            H+C   I  +  K +    + F  VS + EL+ ++ +
Sbjct: 1014 HVCYATIQEVRAKIYFFYLVKFYKVSKSGELIHKIET 1050


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -3

Query: 676 HLCLVVISNLSTKFFLILKLVFD*VSITFELVSRLHS 566
           H+C   I  +  K +    + F  VS + EL+ ++ +
Sbjct: 295 HVCYATIQEVRAKIYFFYLVKFYKVSKSGELIHKIET 331


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 548 HHQQTSQHP*SFFHIFRCQSVLVISDY 468
           HHQQ   H      + RC  + + SD+
Sbjct: 317 HHQQNMSHEELSAMVNRCHPLSLSSDH 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,365
Number of Sequences: 336
Number of extensions: 3134
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)