Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30941
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 159 2e-39
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 159 2e-39
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 144 8e-35
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 144 8e-35
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 134 5e-32
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 131 5e-31
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 128 6e-30
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 128 6e-30
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 123 1e-28
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 103 1e-22
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 95 5e-20
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 54 1e-07
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 33 0.30
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 33 0.30
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 31 1.2
Z82264-8|CAB05153.1| 706|Caenorhabditis elegans Hypothetical pr... 28 8.6
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 159 bits (386), Expect = 2e-39
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +3
Query: 255 ASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSA 434
A+DNQ TVTIQV+EGERPMTKDNH LGKFDLTG+PPAPRG+PQIEVTFEID NGIL V+A
Sbjct: 459 AADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTA 518
Query: 435 EDKGTGNREKIVITNDQNRLTPEDMK 512
EDKGTGN+ KI ITNDQNRL+PED++
Sbjct: 519 EDKGTGNKNKITITNDQNRLSPEDIE 544
Score = 136 bits (330), Expect = 1e-32
Identities = 66/85 (77%), Positives = 70/85 (82%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQDTDAIVLLDVNPLTMGIET 180
PKVQQL+KEFFNGKEPSRGINPDE +SGE+DT IVLLDVNPLTMGIET
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGEEDTGEIVLLDVNPLTMGIET 433
Query: 181 VGGVMTKLIPRNTVIPTKKSQIFST 255
VGGVMTKLI RNTVIPTKKSQ+FST
Sbjct: 434 VGGVMTKLIGRNTVIPTKKSQVFST 458
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +2
Query: 509 ERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEAL 688
ERMI + E+RNELESYAY++KNQ++DKEKLG K+ +DDK +EEA+
Sbjct: 544 ERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAV 603
Query: 689 DAAIKWLEDN 718
+ AI WL N
Sbjct: 604 EEAISWLGSN 613
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 159 bits (386), Expect = 2e-39
Identities = 71/86 (82%), Positives = 80/86 (93%)
Frame = +3
Query: 255 ASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSA 434
A+DNQ TVTIQV+EGERPMTKDNH LGKFDLTG+PPAPRG+PQIEVTFEID NGIL V+A
Sbjct: 459 AADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTA 518
Query: 435 EDKGTGNREKIVITNDQNRLTPEDMK 512
EDKGTGN+ KI ITNDQNRL+PED++
Sbjct: 519 EDKGTGNKNKITITNDQNRLSPEDIE 544
Score = 136 bits (330), Expect = 1e-32
Identities = 66/85 (77%), Positives = 70/85 (82%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQDTDAIVLLDVNPLTMGIET 180
PKVQQL+KEFFNGKEPSRGINPDE +SGE+DT IVLLDVNPLTMGIET
Sbjct: 374 PKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGEEDTGEIVLLDVNPLTMGIET 433
Query: 181 VGGVMTKLIPRNTVIPTKKSQIFST 255
VGGVMTKLI RNTVIPTKKSQ+FST
Sbjct: 434 VGGVMTKLIGRNTVIPTKKSQVFST 458
Score = 74.5 bits (175), Expect = 8e-14
Identities = 31/51 (60%), Positives = 42/51 (82%)
Frame = +2
Query: 566 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN 718
+ E+RNELESYAY++KNQ++DKEKLG K+ +DDK +EEA++ AI WL N
Sbjct: 563 KAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSN 613
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 144 bits (348), Expect = 8e-35
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +3
Query: 255 ASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSA 434
A+D+Q V+I +YEGERPM DNH LG FD+TGIPPAPRG+PQIEVTFEID NGIL VSA
Sbjct: 87 AADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSA 146
Query: 435 EDKGTGNREKIVITNDQNRLTPEDMK 512
EDKGTGN+ K+ ITND NRL+PED++
Sbjct: 147 EDKGTGNKNKLTITNDHNRLSPEDIE 172
Score = 124 bits (298), Expect = 9e-29
Identities = 58/85 (68%), Positives = 67/85 (78%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQDTDAIVLLDVNPLTMGIET 180
PKVQQL+K++FNGKEPSRGINPDE + G ++T +VLLDVNPLT+GIET
Sbjct: 2 PKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGGVENTGDVVLLDVNPLTLGIET 61
Query: 181 VGGVMTKLIPRNTVIPTKKSQIFST 255
VGGVMTKLI RNTVIPTKKSQ+F T
Sbjct: 62 VGGVMTKLIGRNTVIPTKKSQVFPT 86
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +2
Query: 509 ERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEAL 688
ERMI +VESRNELE+YAY IK Q+ DKEKLG K+TD+DK +E A+
Sbjct: 172 ERMINDADKFAADDQAQKEKVESRNELEAYAYQIKTQIADKEKLGGKLTDEDKVSIESAV 231
Query: 689 DAAIKWLEDN 718
+ AI+WL N
Sbjct: 232 ERAIEWLGSN 241
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 144 bits (348), Expect = 8e-35
Identities = 63/86 (73%), Positives = 74/86 (86%)
Frame = +3
Query: 255 ASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSA 434
A+D+Q V+I +YEGERPM DNH LG FD+TGIPPAPRG+PQIEVTFEID NGIL VSA
Sbjct: 456 AADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSA 515
Query: 435 EDKGTGNREKIVITNDQNRLTPEDMK 512
EDKGTGN+ K+ ITND NRL+PED++
Sbjct: 516 EDKGTGNKNKLTITNDHNRLSPEDIE 541
Score = 126 bits (303), Expect = 2e-29
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQDTDAIVLLDVNPLTMGIET 180
PKVQQL+K++FNGKEPSRGINPDE + G ++T +VLLDVNPLT+GIET
Sbjct: 371 PKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGGVENTGDVVLLDVNPLTLGIET 430
Query: 181 VGGVMTKLIPRNTVIPTKKSQIFST 255
VGGVMTKLI RNTVIPTKKSQ+FST
Sbjct: 431 VGGVMTKLIGRNTVIPTKKSQVFST 455
Score = 74.9 bits (176), Expect = 6e-14
Identities = 35/70 (50%), Positives = 45/70 (64%)
Frame = +2
Query: 509 ERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEAL 688
ERMI +VESRNELE+YAY +K Q+ DKEKLG K+TD+DK +E A+
Sbjct: 541 ERMINDADKFAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESAV 600
Query: 689 DAAIKWLEDN 718
+ AI+WL N
Sbjct: 601 ERAIEWLGSN 610
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 134 bits (325), Expect = 5e-32
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +3
Query: 258 SDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAE 437
SDNQ V IQVYEGER MTKDN+LLGKF+L+GIPPAPRG+PQIEVTF+IDANGIL VSA
Sbjct: 433 SDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAT 492
Query: 438 DKGTGNREKIVITNDQNRLTPEDMK 512
DK TG + KI ITND+ RL+ +D++
Sbjct: 493 DKSTGKQNKITITNDKGRLSKDDIE 517
Score = 87.8 bits (208), Expect = 8e-18
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQD--TDAIVLLDVNPLTMGI 174
PKVQ+L+ + F+GKE ++ INPDE LSG++ ++LLDV PL++GI
Sbjct: 345 PKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGI 404
Query: 175 ETVGGVMTKLIPRNTVIPTKKSQIFST 255
ET GGVMT LI RNT IPTK +Q F+T
Sbjct: 405 ETAGGVMTALIKRNTTIPTKTAQTFTT 431
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +2
Query: 509 ERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEAL 688
ERM+ R+ ++N LESYA+++K ++D EKL K++ +DK K+E+
Sbjct: 517 ERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIED-EKLKDKISPEDKKKIEDKC 575
Query: 689 DAAIKWLEDN 718
D +KWL+ N
Sbjct: 576 DEILKWLDSN 585
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 131 bits (317), Expect = 5e-31
Identities = 60/85 (70%), Positives = 73/85 (85%)
Frame = +3
Query: 258 SDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAE 437
SDNQ V IQVYEGER MTKDN+LLGKF+L+GIPPAPRG+PQIEVTF+IDANGIL VSA
Sbjct: 433 SDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAT 492
Query: 438 DKGTGNREKIVITNDQNRLTPEDMK 512
DK TG ++I ITND++R + +D++
Sbjct: 493 DKSTGKAKQITITNDKDRFSKDDIE 517
Score = 87.8 bits (208), Expect = 8e-18
Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQD--TDAIVLLDVNPLTMGI 174
PKVQ+L+ + F+GKE ++ INPDE LSG++ ++LLDV PL++GI
Sbjct: 345 PKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGI 404
Query: 175 ETVGGVMTKLIPRNTVIPTKKSQIFST 255
ET GGVMT LI RNT IPTK +Q F+T
Sbjct: 405 ETAGGVMTALIKRNTTIPTKTAQTFTT 431
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +2
Query: 509 ERMIXXXXXXXXXXXXXXXRVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEAL 688
ERM+ R+ ++N LESYA+++K ++D EKL K++ +DK K+E+
Sbjct: 517 ERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIED-EKLKDKISPEDKKKIEDKC 575
Query: 689 DAAIKWLEDN 718
D +KWL+ N
Sbjct: 576 DEILKWLDSN 585
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 128 bits (308), Expect = 6e-30
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +3
Query: 258 SDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAE 437
+DNQ V+IQVYEGER MT+DNH LG F+L+GIPPAPRG+PQIEVTF+IDANGIL VSAE
Sbjct: 433 ADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAE 492
Query: 438 DKGTGNREKIVITNDQNRLTPEDM 509
DK TG +I I N++ RLT D+
Sbjct: 493 DKSTGKSNRITIQNEKGRLTQSDI 516
Score = 88.2 bits (209), Expect = 6e-18
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQDTDA--IVLLDVNPLTMGI 174
PK+Q+L+K+FFNGKE + INPDE LSG +D ++L+DV PL++GI
Sbjct: 345 PKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGI 404
Query: 175 ETVGGVMTKLIPRNTVIPTKKSQIFST 255
ET GGVMT LI RNT IPTK + F+T
Sbjct: 405 ETAGGVMTNLIDRNTRIPTKACKTFTT 431
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/51 (37%), Positives = 37/51 (72%)
Frame = +2
Query: 566 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN 718
RV++RN+LE+YA+ IK L ++ +K++ +D ++ +EA+D ++WL+ N
Sbjct: 536 RVQARNQLEAYAFQIKQAL---DEYSSKLSTEDASRAKEAVDETLRWLDSN 583
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 128 bits (308), Expect = 6e-30
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +3
Query: 258 SDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAE 437
+DNQ V+IQVYEGER MT+DNH LG F+L+GIPPAPRG+PQIEVTF+IDANGIL VSAE
Sbjct: 433 ADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFDIDANGILNVSAE 492
Query: 438 DKGTGNREKIVITNDQNRLTPEDM 509
DK TG +I I N++ RLT D+
Sbjct: 493 DKSTGKSNRITIQNEKGRLTQSDI 516
Score = 88.2 bits (209), Expect = 6e-18
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQDTDA--IVLLDVNPLTMGI 174
PK+Q+L+K+FFNGKE + INPDE LSG +D ++L+DV PL++GI
Sbjct: 345 PKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVKDETIKDVLLVDVAPLSLGI 404
Query: 175 ETVGGVMTKLIPRNTVIPTKKSQIFST 255
ET GGVMT LI RNT IPTK + F+T
Sbjct: 405 ETAGGVMTNLIDRNTRIPTKACKTFTT 431
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/51 (37%), Positives = 37/51 (72%)
Frame = +2
Query: 566 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN 718
RV++RN+LE+YA+ IK L ++ +K++ +D ++ +EA+D ++WL+ N
Sbjct: 536 RVQARNQLEAYAFQIKQAL---DEYSSKLSTEDASRAKEAVDETLRWLDSN 583
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 123 bits (297), Expect = 1e-28
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +3
Query: 258 SDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSAE 437
+DNQ V+IQVYEGER MT+DNH LG F+LTGIPPAPRG+PQ++VTF+IDANGIL VSA
Sbjct: 433 ADNQPGVSIQVYEGERAMTRDNHRLGTFELTGIPPAPRGVPQVDVTFDIDANGILNVSAA 492
Query: 438 DKGTGNREKIVITNDQNRLTPEDM 509
DK TG +I I N++ RL+ D+
Sbjct: 493 DKSTGRSNRITIRNEKGRLSQADI 516
Score = 86.2 bits (204), Expect = 2e-17
Identities = 45/87 (51%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQDTDA--IVLLDVNPLTMGI 174
PK+Q+L+KEFFNGK+ + INPDE LSG +D ++L+DV PL+ GI
Sbjct: 345 PKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLSGVKDDTIKDVLLVDVVPLSHGI 404
Query: 175 ETVGGVMTKLIPRNTVIPTKKSQIFST 255
ET GGVMT LI RNT IP K S+ F+T
Sbjct: 405 ETAGGVMTNLIDRNTRIPAKASKTFTT 431
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/51 (33%), Positives = 35/51 (68%)
Frame = +2
Query: 566 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN 718
R+ SRN+LE+YA+ +K L E+ G+ ++ +D + ++A++ ++W+E N
Sbjct: 536 RISSRNQLEAYAFQVKQAL---EEHGSLLSAEDAKRAKDAVEDTLRWMERN 583
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 103 bits (248), Expect = 1e-22
Identities = 46/73 (63%), Positives = 58/73 (79%)
Frame = +3
Query: 255 ASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSA 434
A+D Q V I+V++GER M N LLG+F L GIPPAPRG+PQ+EVTF+IDANGI+ VSA
Sbjct: 454 AADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSA 513
Query: 435 EDKGTGNREKIVI 473
D+GTG ++IVI
Sbjct: 514 RDRGTGKEQQIVI 526
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/91 (53%), Positives = 60/91 (65%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQDTDAIVLLDVNPLTMGIET 180
PKVQ V+E F GK PS+ +NPDE L+G D ++LLDV PL++GIET
Sbjct: 372 PKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAG--DVTDVLLLDVTPLSLGIET 428
Query: 181 VGGVMTKLIPRNTVIPTKKSQIFSTPVTTNT 273
+GG+MTKLI RNT IPTKKSQ+FST T
Sbjct: 429 LGGIMTKLITRNTTIPTKKSQVFSTAADGQT 459
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/91 (53%), Positives = 60/91 (65%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXXXLSGEQDTDAIVLLDVNPLTMGIET 180
PKVQ V+E F GK PS+ +NPDE L+G D ++LLDV PL++GIET
Sbjct: 372 PKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAG--DVTDVLLLDVTPLSLGIET 428
Query: 181 VGGVMTKLIPRNTVIPTKKSQIFSTPVTTNT 273
+GG+MTKLI RNT IPTKKSQ+FST T
Sbjct: 429 LGGIMTKLITRNTTIPTKKSQVFSTAADGQT 459
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 255 ASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGI 356
A+D Q V I+V++GER M N LLG+F L GI
Sbjct: 454 AADGQTQVQIKVFQGEREMATSNKLLGQFSLVGI 487
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/87 (35%), Positives = 44/87 (50%)
Frame = +3
Query: 255 ASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSA 434
+ D Q ++ + VYEGER + N LG+ L I P RG +++T E+D NGILQ +A
Sbjct: 427 SDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYNGILQATA 485
Query: 435 EDKGTGNREKIVITNDQNRLTPEDMKE 515
D T I D T ++ E
Sbjct: 486 LDLNTKKAITTTILYDCCTYTQPEIDE 512
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEP-SRGINPDEXXXXXXXXXXXXLSGEQDTDAIVLLDVNPLTMGIE 177
P ++ ++K+ F I+PDE LSG ++ + L+DV P+++G++
Sbjct: 341 PILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSGAEEVQDMRLIDVIPMSIGVQ 400
Query: 178 TVGGVMTKLIPRNTVIPTKKSQIF 249
M+ LI + TV P K + F
Sbjct: 401 CNRDYMSVLIKKGTVFPCTKRKTF 424
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/87 (35%), Positives = 44/87 (50%)
Frame = +3
Query: 255 ASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVTFEIDANGILQVSA 434
+ D Q ++ + VYEGER + N LG+ L I P RG +++T E+D NGILQ +A
Sbjct: 427 SDDFQTSINVPVYEGERVLCSHNRQLGEISLP-IQPKRRGESVVDITLEVDYNGILQATA 485
Query: 435 EDKGTGNREKIVITNDQNRLTPEDMKE 515
D T I D T ++ E
Sbjct: 486 LDLNTKKAITTTILYDCCTYTQPEIDE 512
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 PKVQQLVKEFFNGKEP-SRGINPDEXXXXXXXXXXXXLSGEQDTDAIVLLDVNPLTMGIE 177
P ++ ++K+ F I+PDE LSG ++ + L+DV P+++G++
Sbjct: 341 PILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSGAEEVQDMRLIDVIPMSIGVQ 400
Query: 178 TVGGVMTKLIPRNTVIPTKKSQIF 249
M+ LI + TV P K + F
Sbjct: 401 CNRDYMSVLIKKGTVFPCTKRKTF 424
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 34.3 bits (75), Expect = 0.099
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 566 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN 718
R NELES+ + L++ E + D++K K+E+++ WLED+
Sbjct: 693 RAAVENELESFNFECSQYLEETE-FTDYMADEEKTKLEDSVKRIRAWLEDD 742
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 566 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN 718
R E+ N LE Y + +L+D E+ T+++K + E + W ED+
Sbjct: 650 REEAMNRLEGLLYDLAVRLEDGEEYAEYATEEEKKAILEEVAVLKLWFEDD 700
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 566 RVESRNELESYAYSIKNQLQDKEKLGAKVTDDDKAKMEEALDAAIKWLEDN 718
R E+ N LE Y + +L+D E+ T+++K + E + W ED+
Sbjct: 666 REEAMNRLEGLLYDLAVRLEDGEEYAEYATEEEKKAILEEVAVLKLWFEDD 716
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +1
Query: 109 LSGEQDTDAIVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFST------PVTTN 270
LS D +A+ PLT E + V T + +T +PT S+ +T P TT
Sbjct: 349 LSKTGDDEALQNTFPLPLTTTTEVISDVPTTTVQTSTTVPTTPSKTTATTTTTPKPTTTE 408
Query: 271 TLSL-SKCTRVSDQ*PRT 321
T + S T V+ Q P T
Sbjct: 409 TATTSSSTTTVTTQKPTT 426
>Z82264-8|CAB05153.1| 706|Caenorhabditis elegans Hypothetical
protein C49C3.1 protein.
Length = 706
Score = 27.9 bits (59), Expect = 8.6
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -1
Query: 108 YTSLHSSTICDSLIRVNSTRWLLAI 34
Y ++ S+ICD + + +WL+A+
Sbjct: 447 YVNVFCSSICDQFVNLRKRKWLVAV 471
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,320,987
Number of Sequences: 27780
Number of extensions: 310192
Number of successful extensions: 1077
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -