Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30938
         (486 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Y3S2 Cluster: Zinc finger protein 330; n=35; Eumetazo...    92   7e-18
UniRef50_Q8WQH6 Cluster: NOA36-like protein; n=2; Bilateria|Rep:...    79   4e-14
UniRef50_Q5DEC5 Cluster: SJCHGC09128 protein; n=1; Schistosoma j...    67   2e-10
UniRef50_Q7QPD4 Cluster: GLP_89_8425_10077; n=1; Giardia lamblia...    33   2.6  
UniRef50_UPI00015A7B11 Cluster: UPI00015A7B11 related cluster; n...    33   4.5  
UniRef50_P18753 Cluster: Oocyte zinc finger protein XlCOF8.4; n=...    32   6.0  
UniRef50_Q244X4 Cluster: Putative uncharacterized protein; n=1; ...    32   7.9  
UniRef50_Q9P243 Cluster: Zinc finger protein 406; n=23; Amniota|...    32   7.9  

>UniRef50_Q9Y3S2 Cluster: Zinc finger protein 330; n=35;
           Eumetazoa|Rep: Zinc finger protein 330 - Homo sapiens
           (Human)
          Length = 320

 Score = 91.9 bits (218), Expect = 7e-18
 Identities = 39/69 (56%), Positives = 47/69 (68%)
 Frame = +1

Query: 1   ETYKCQSCNRIGQYSCLRCKTCFCEEHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMS 180
           ET+KC SCNR+GQ+SCLRCK CFC++H              PPCPKC + T  T DLSMS
Sbjct: 171 ETFKCVSCNRLGQHSCLRCKACFCDDHT-RSKVFKQEKGKQPPCPKCGHETQETKDLSMS 229

Query: 181 TRSHRYGRQ 207
           TRS ++GRQ
Sbjct: 230 TRSLKFGRQ 238


>UniRef50_Q8WQH6 Cluster: NOA36-like protein; n=2; Bilateria|Rep:
           NOA36-like protein - Brugia malayi (Filarial nematode
           worm)
          Length = 322

 Score = 79.4 bits (187), Expect = 4e-14
 Identities = 32/69 (46%), Positives = 38/69 (55%)
 Frame = +1

Query: 1   ETYKCQSCNRIGQYSCLRCKTCFCEEHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMS 180
           E +KC SCNR G Y+CLRCK C C +HV              PCPKC YP   T + S+S
Sbjct: 170 ENFKCMSCNRFGLYTCLRCKVCCCNDHVRRKGFKYDKDHKNLPCPKCGYPITETKEFSIS 229

Query: 181 TRSHRYGRQ 207
            R + Y RQ
Sbjct: 230 ARKYVYARQ 238


>UniRef50_Q5DEC5 Cluster: SJCHGC09128 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09128 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 130

 Score = 67.3 bits (157), Expect = 2e-10
 Identities = 28/69 (40%), Positives = 41/69 (59%)
 Frame = +1

Query: 1   ETYKCQSCNRIGQYSCLRCKTCFCEEHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMS 180
           E++KC SCN++G  +CLRCK  +C++H               PCPKC +    + +LS+S
Sbjct: 20  ESFKCASCNKMGTQTCLRCKVTYCDDHCKRKGVKYERGKPI-PCPKCGHKLTDSYNLSVS 78

Query: 181 TRSHRYGRQ 207
            RS+ YGRQ
Sbjct: 79  VRSYDYGRQ 87


>UniRef50_Q7QPD4 Cluster: GLP_89_8425_10077; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_89_8425_10077 - Giardia lamblia ATCC
           50803
          Length = 550

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 7   YKCQSCNRIGQYSCLRCKTCF-CEEHV 84
           Y C  CN  G + C +C++C+ C EH+
Sbjct: 80  YLCVICNSEGSFLCTQCRSCYCCREHL 106


>UniRef50_UPI00015A7B11 Cluster: UPI00015A7B11 related cluster; n=1;
           Danio rerio|Rep: UPI00015A7B11 UniRef100 entry - Danio
           rerio
          Length = 510

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 1   ETYKCQSCNRIGQYSCLRCKTCFCEEHV 84
           +T  C  C+     SCL+C T FCE H+
Sbjct: 79  KTIFCDVCSEYAVKSCLQCVTSFCETHL 106


>UniRef50_P18753 Cluster: Oocyte zinc finger protein XlCOF8.4; n=19;
           Xenopus|Rep: Oocyte zinc finger protein XlCOF8.4 -
           Xenopus laevis (African clawed frog)
          Length = 780

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 40  YSCLRCKTCFCEEHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMSTRSH 192
           +SC  C  CF   HV              PC +C    A ++D+++  R+H
Sbjct: 306 FSCSECGKCFSTPHVRARHQKTHTGEKPFPCSECGKCFARSSDVTVHRRTH 356


>UniRef50_Q244X4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 3713

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 13  CQSCNRIGQYSCLRCK 60
           CQ+CN++GQ  CL CK
Sbjct: 468 CQTCNKVGQDQCLTCK 483


>UniRef50_Q9P243 Cluster: Zinc finger protein 406; n=23;
           Amniota|Rep: Zinc finger protein 406 - Homo sapiens
           (Human)
          Length = 1243

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +1

Query: 40  YSCLRCKTCFCEEHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMSTRSH 192
           ++C  C   F  +H                CP+CSY +A+ A+L++  R H
Sbjct: 271 FTCEYCNKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKH 321


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,743,639
Number of Sequences: 1657284
Number of extensions: 3907059
Number of successful extensions: 13973
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13965
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)