Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30938
         (486 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122179-1|AAM52691.1|  315|Drosophila melanogaster LD37139p pro...   104   6e-23
AJ131564-1|CAB39165.1|  313|Drosophila melanogaster nucleolar pr...   104   6e-23
AE014297-4242|AAF56799.1|  315|Drosophila melanogaster CG10009-P...   104   6e-23
AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.    29   2.6  
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P...    29   2.6  

>AY122179-1|AAM52691.1|  315|Drosophila melanogaster LD37139p
           protein.
          Length = 315

 Score =  104 bits (250), Expect = 6e-23
 Identities = 43/69 (62%), Positives = 52/69 (75%)
 Frame = +1

Query: 1   ETYKCQSCNRIGQYSCLRCKTCFCEEHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMS 180
           E YKCQSCN++GQYSCLRCKTC+CE+HV              PCPKC+Y T++T DLSMS
Sbjct: 169 ENYKCQSCNKLGQYSCLRCKTCYCEDHVRRKGFKYDKNKPI-PCPKCNYDTSVTKDLSMS 227

Query: 181 TRSHRYGRQ 207
           TRSH++GRQ
Sbjct: 228 TRSHKFGRQ 236


>AJ131564-1|CAB39165.1|  313|Drosophila melanogaster nucleolar
           protein, putative protein.
          Length = 313

 Score =  104 bits (250), Expect = 6e-23
 Identities = 43/69 (62%), Positives = 52/69 (75%)
 Frame = +1

Query: 1   ETYKCQSCNRIGQYSCLRCKTCFCEEHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMS 180
           E YKCQSCN++GQYSCLRCKTC+CE+HV              PCPKC+Y T++T DLSMS
Sbjct: 169 ENYKCQSCNKLGQYSCLRCKTCYCEDHVRRKGFKYDKNKPI-PCPKCNYDTSVTKDLSMS 227

Query: 181 TRSHRYGRQ 207
           TRSH++GRQ
Sbjct: 228 TRSHKFGRQ 236


>AE014297-4242|AAF56799.1|  315|Drosophila melanogaster CG10009-PA
           protein.
          Length = 315

 Score =  104 bits (250), Expect = 6e-23
 Identities = 43/69 (62%), Positives = 52/69 (75%)
 Frame = +1

Query: 1   ETYKCQSCNRIGQYSCLRCKTCFCEEHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMS 180
           E YKCQSCN++GQYSCLRCKTC+CE+HV              PCPKC+Y T++T DLSMS
Sbjct: 169 ENYKCQSCNKLGQYSCLRCKTCYCEDHVRRKGFKYDKNKPI-PCPKCNYDTSVTKDLSMS 227

Query: 181 TRSHRYGRQ 207
           TRSH++GRQ
Sbjct: 228 TRSHKFGRQ 236


>AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.
          Length = 990

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
 Frame = +1

Query: 19  SCNRIGQYSCLRCKTCFCE-EHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMSTRSH 192
           S N I +YSC  C   FC+  ++              PCP+C      ++ L      H
Sbjct: 273 SHNNIRKYSCENCSKVFCDPSNLQRHIRAYHVGARCHPCPECGKTFGTSSGLKQHQHIH 331


>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
           protein.
          Length = 1108

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
 Frame = +1

Query: 19  SCNRIGQYSCLRCKTCFCE-EHVXXXXXXXXXXXXXPPCPKCSYPTALTADLSMSTRSH 192
           S N I +YSC  C   FC+  ++              PCP+C      ++ L      H
Sbjct: 391 SHNNIRKYSCENCSKVFCDPSNLQRHIRAYHVGARCHPCPECGKTFGTSSGLKQHQHIH 449


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,766,103
Number of Sequences: 53049
Number of extensions: 200778
Number of successful extensions: 892
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)