Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30937
(599 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 167 1e-40
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 150 2e-35
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 150 2e-35
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 127 2e-28
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 117 2e-25
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 103 4e-21
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 102 7e-21
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 92 1e-17
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 92 1e-17
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 83 5e-15
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 83 6e-15
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 79 6e-14
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 74 3e-12
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 1e-11
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 70 5e-11
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 69 6e-11
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 68 2e-10
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 68 2e-10
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 67 3e-10
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 65 1e-09
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 63 4e-09
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 57 3e-07
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 54 3e-06
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 52 1e-05
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 51 2e-05
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 46 5e-04
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 46 0.001
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 0.002
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 44 0.002
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 44 0.004
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 43 0.005
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 40 0.045
UniRef50_Q4U8F9 Cluster: Phospholipase, putative; n=2; Theileria... 34 2.9
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 5.1
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 33 5.1
UniRef50_A5E1V3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome s... 33 6.8
UniRef50_Q5P3U7 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 167 bits (407), Expect = 1e-40
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEA
Sbjct: 10 LAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEA 69
Query: 181 RRKGRHCGFGKRRGTANARMPQKEL 255
RRKGRHCGFGKR+GTANARMP K L
Sbjct: 70 RRKGRHCGFGKRKGTANARMPTKLL 94
Score = 100 bits (239), Expect = 3e-20
Identities = 49/82 (59%), Positives = 57/82 (69%)
Frame = +3
Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQC*GPPQ*SEGGTQ 485
+KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ Q +
Sbjct: 112 SKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK 171
Query: 486 APRGTYCRKKEELLQTFAREDE 551
KK+EL+ A+EDE
Sbjct: 172 RREERIATKKQELIALHAKEDE 193
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 150 bits (364), Expect = 2e-35
Identities = 68/83 (81%), Positives = 75/83 (90%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT A
Sbjct: 2 LASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLA 61
Query: 181 RRKGRHCGFGKRRGTANARMPQK 249
RRKGRH G GKR+GTANARMP+K
Sbjct: 62 RRKGRHMGIGKRKGTANARMPEK 84
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = +3
Query: 186 KGSSLWLW*EKRYSQCAYATEGTWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 365
KG + + K + + TW +KKIDRH+YHSLY+K KGNV
Sbjct: 64 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 123
Query: 366 FKNKRVLMEYIHRKKAEKARTKMLSDQ 446
FKNKR+LME+IH+ KA+KAR K+L+DQ
Sbjct: 124 FKNKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 150 bits (364), Expect = 2e-35
Identities = 68/83 (81%), Positives = 75/83 (90%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT A
Sbjct: 10 LASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLA 69
Query: 181 RRKGRHCGFGKRRGTANARMPQK 249
RRKGRH G GKR+GTANARMP+K
Sbjct: 70 RRKGRHMGIGKRKGTANARMPEK 92
Score = 93.5 bits (222), Expect = 3e-18
Identities = 47/122 (38%), Positives = 69/122 (56%)
Frame = +3
Query: 186 KGSSLWLW*EKRYSQCAYATEGTWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 365
KG + + K + + TW +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 366 FKNKRVLMEYIHRKKAEKARTKMLSDQC*GPPQ*SEGGTQAPRGTYCRKKEELLQTFARE 545
FKNKR+LME+IH+ KA+KAR K+L+DQ ++ + KKEE+++T ++E
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKE 191
Query: 546 DE 551
+E
Sbjct: 192 EE 193
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 127 bits (306), Expect = 2e-28
Identities = 58/85 (68%), Positives = 68/85 (80%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR+R RKN A
Sbjct: 10 LASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSRSRCRKNLIA 69
Query: 181 RRKGRHCGFGKRRGTANARMPQKEL 255
RRKGRH G GKR+GTA+ARMPQK L
Sbjct: 70 RRKGRHTGTGKRKGTADARMPQKVL 94
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +3
Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 446
A KID+HLYH LY + KGN FKNKRVL+++IH+KKAE+ R K LSDQ
Sbjct: 112 AHKIDKHLYHLLYQQCKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 117 bits (281), Expect = 2e-25
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSRAR RK EA
Sbjct: 30 LASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSRARWRKMKEA 89
Query: 181 RRKGRHCGFGKRRGTANARMPQKEL 255
+ GRH G G+R G+ ARMP KEL
Sbjct: 90 KDMGRHNGVGRREGSREARMPSKEL 114
Score = 68.9 bits (161), Expect = 8e-11
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +3
Query: 309 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQC*GPPQ*SEGGTQA 488
KKIDRH+Y LYM+AKGNVF+NKR L+E+IH+ K EK + + L++Q E
Sbjct: 133 KKIDRHVYRDLYMRAKGNVFRNKRNLVEHIHKIKNEKKKERQLAEQLAAKHLRDEQNRNK 192
Query: 489 PRGTYCRKKEELLQTFARED 548
R +K+E+ + R+D
Sbjct: 193 ARKQELKKREKERERARRDD 212
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 103 bits (246), Expect = 4e-21
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR R RK EA
Sbjct: 10 LASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSRGRCRKRLEA 69
Query: 181 RRKGRHCGFGKRRGTANARMPQKELGYK 264
++KGRH G GKR GTANARMPQK++ K
Sbjct: 70 KKKGRHMGTGKRFGTANARMPQKKIWMK 97
Score = 33.1 bits (72), Expect = 5.1
Identities = 14/45 (31%), Positives = 30/45 (66%)
Frame = +3
Query: 312 KIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 446
+I + + Y +AKG++FK++ + + I ++KA++ R K L++Q
Sbjct: 114 EITKEDFRVFYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 102 bits (244), Expect = 7e-21
Identities = 51/83 (61%), Positives = 62/83 (74%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+A KNT
Sbjct: 10 LASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQAHCEKNT-- 67
Query: 181 RRKGRHCGFGKRRGTANARMPQK 249
KGRH GK +GTAN +P++
Sbjct: 68 -LKGRHMVIGKGKGTANIWVPER 89
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +3
Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 446
+KKID H+ HSLY++ K NVFKN+ +LME IH+ KA+KA K+L+DQ
Sbjct: 109 SKKIDCHMCHSLYLRVKRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 91.9 bits (218), Expect = 1e-17
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
+A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR R+R E
Sbjct: 10 IASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSRNRIRSRKEE 69
Query: 181 RRKGRHCGFGKRRGTANAR 237
+ GRH G GKR+G+ N+R
Sbjct: 70 IKLGRHEGLGKRKGSKNSR 88
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/47 (53%), Positives = 37/47 (78%)
Frame = +3
Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 446
+ K++RHLY SLY+K+KGNVFKNK++L E+IH+ K E+ R + D+
Sbjct: 112 SSKLNRHLYRSLYLKSKGNVFKNKKILTEFIHKAKNEQKRKEEFLDK 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 91.9 bits (218), Expect = 1e-17
Identities = 38/88 (43%), Positives = 63/88 (71%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR R R E
Sbjct: 10 VAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQ 69
Query: 181 RRKGRHCGFGKRRGTANARMPQKELGYK 264
++KGRH G G R+G ARM +KEL K
Sbjct: 70 KKKGRHRGPGSRKGKKTARMGKKELWIK 97
Score = 37.1 bits (82), Expect = 0.32
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 309 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKAR 425
KKIDR Y LY++AKG FK+K L ++ K R
Sbjct: 113 KKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 83.0 bits (196), Expect = 5e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +3
Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 446
AKKID+H+YHS+Y+K KGNVFKNKRVLME IH+ KAEKAR K L+DQ
Sbjct: 132 AKKIDKHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
Score = 66.1 bits (154), Expect = 6e-10
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 20/105 (19%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV-------------- 138
LAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 10 LAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTFPTLRGFHAA 69
Query: 139 ------AVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQKEL 255
+HSRAR + A+R GRH G+GKRRGT AR+P K L
Sbjct: 70 RAYFNFQIHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVL 114
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 82.6 bits (195), Expect = 6e-15
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV+K E
Sbjct: 12 MAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQ 71
Query: 181 RRKGRHCGFGKRRGTANARMPQKE 252
R+KGR G G RRG A AR P KE
Sbjct: 72 RKKGRRRGPGSRRGAAGARTPPKE 95
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 79.4 bits (187), Expect = 6e-14
Identities = 38/85 (44%), Positives = 52/85 (61%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR R+R A
Sbjct: 10 LAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSRGRIRARHAA 69
Query: 181 RRKGRHCGFGKRRGTANARMPQKEL 255
+R GRH G GKRRGT ARMP K L
Sbjct: 70 KRLGRHSGHGKRRGTREARMPSKTL 94
Score = 55.6 bits (128), Expect = 8e-07
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +3
Query: 309 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 446
+KIDRHLY +LY KAKGN+FKNKRVL+E+I + E+ K ++
Sbjct: 113 EKIDRHLYETLYAKAKGNMFKNKRVLLEHIVGMQKEQELEKKKKEE 158
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+ E
Sbjct: 9 MAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRARELHEK 68
Query: 181 RRKGRHCGFGKRRGTANARMPQK 249
++KGR G G R+G AR K
Sbjct: 69 KKKGRRRGPGSRKGKRTARADPK 91
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 309 KKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 407
K ID Y LY K KGN+FK++ L+ Y+ +K
Sbjct: 112 KIIDNKTYWDLYKKVKGNLFKSRSHLLLYLKQK 144
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 71.7 bits (168), Expect = 1e-11
Identities = 27/54 (50%), Positives = 42/54 (77%)
Frame = +1
Query: 7 ASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 168
A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 22 AIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 69.7 bits (163), Expect = 5e-11
Identities = 27/75 (36%), Positives = 51/75 (68%)
Frame = +1
Query: 25 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 204
G +VW+DP +++++++ ++++R++I +G++ +P SR+R RK + KGR G
Sbjct: 23 GVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSRSRARKAAAQKAKGRRSG 82
Query: 205 FGKRRGTANARMPQK 249
G R+G+ANAR P+K
Sbjct: 83 QGSRKGSANARNPRK 97
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 69.3 bits (162), Expect = 6e-11
Identities = 39/86 (45%), Positives = 53/86 (61%)
Frame = +1
Query: 16 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGR 195
+RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K T ARR+G
Sbjct: 49 LRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA-----------TLARRRGW 97
Query: 196 HCGFGKRRGTANARMPQKELGYKDKG 273
H G KR+GT + + + L K KG
Sbjct: 98 HMGIRKRKGTIDYHL-YRSLYLKVKG 122
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = +3
Query: 315 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQ 446
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQ
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 67.7 bits (158), Expect = 2e-10
Identities = 45/106 (42%), Positives = 57/106 (53%)
Frame = -1
Query: 458 RASALVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS 279
+A A A GL+ L VDVLHE+ L LE+I L ++ V+ M VNLL +
Sbjct: 53 QAPAWSASSFLAGLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH 112
Query: 278 *NPLSLYPSSFCGIRALAVPLLLPKPQ*RPFLRASVFLRTRARECT 141
+ L +F GI+ALAVP L P PF R+ VF R RARE T
Sbjct: 113 RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 67.7 bits (158), Expect = 2e-10
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +3
Query: 150 PRSCPQKHRST*KGSSLWLW*EKRYSQCAYATEGTWXXXXXXXXXXXXXXXTAKKIDRHL 329
P S +KH +G + E+ + + + TW +KKIDR +
Sbjct: 515 PGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRYRESKKIDRRM 574
Query: 330 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 446
YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ
Sbjct: 575 YHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
Score = 42.7 bits (96), Expect = 0.006
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +1
Query: 115 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMPQK 249
GL+I+KPV VHS +R+ +G+ G + GTANARM +K
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEK 547
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
+AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K E
Sbjct: 9 IAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRIEQ 68
Query: 181 RRKGRHCGFGKRRGTANARMPQK 249
KGR G G RGT AR P+K
Sbjct: 69 LAKGRRRGEGSVRGTKYARFPRK 91
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+ R R E
Sbjct: 10 MAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSKGRARSRAEK 69
Query: 181 RRKGRHCGFGKRRGTANARMPQKE 252
R G G G R+G + R +K+
Sbjct: 70 RAYGHRKGPGSRKGRSGGRKNEKD 93
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 63.3 bits (147), Expect = 4e-09
Identities = 30/83 (36%), Positives = 48/83 (57%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR R R+
Sbjct: 10 LAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRARERDAK 69
Query: 181 RRKGRHCGFGKRRGTANARMPQK 249
G G G R+G A AR +K
Sbjct: 70 ESYGHKKGAGSRKGKAGARQNEK 92
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/77 (38%), Positives = 46/77 (59%)
Frame = +3
Query: 303 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQC*GPPQ*SEGGT 482
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ Q +E
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQAEARRSKTEEAH 117
Query: 483 QAPRGTYCRKKEELLQT 533
+ KKEE+++T
Sbjct: 118 KGCEERLQAKKEEIIET 134
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 53.6 bits (123), Expect = 3e-06
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 LAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 174
LAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++ +
Sbjct: 9 LAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRH 68
Query: 175 EARRKGRHCGFGKRRGTANARMPQKE 252
RRKGR G G+R+G A AR+ KE
Sbjct: 69 LQRRKGRRRGMGRRKGVATARLDPKE 94
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = +1
Query: 7 ASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARR 186
A ++ K ++ + + ++ +R ++R ++K+GL+ KP +SR R R E R+
Sbjct: 8 ARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRK 67
Query: 187 KGRHCGFGKRRGTANAR 237
GR G G RRGT AR
Sbjct: 68 SGRRRGRGSRRGTRKAR 84
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/84 (29%), Positives = 46/84 (54%)
Frame = +1
Query: 4 AASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEAR 183
A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + S R + +
Sbjct: 10 ASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYRKKLRKAKK 69
Query: 184 RKGRHCGFGKRRGTANARMPQKEL 255
+ G G G+R+GT NAR K L
Sbjct: 70 QSGLKRGIGRRKGTKNARKKYKIL 93
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/88 (29%), Positives = 47/88 (53%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R +
Sbjct: 11 LASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGRAQHKRRQ 70
Query: 181 RRKGRHCGFGKRRGTANARMPQKELGYK 264
+ K R G ++G AR+ +K++ K
Sbjct: 71 KAK-RGSKAGSKQGRMGARVGKKQVYVK 97
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 309 KKIDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 419
KKID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 54 KKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 132
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = -3
Query: 258 PKFLLWHTRIGCTSSLTKATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGV 79
P LL + +G T L A + L + VF+ S G+ ++ LDD+ I D ++D+L GV
Sbjct: 98 PGPLLGYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGV 157
Query: 78 GVCDLI 61
G+ D I
Sbjct: 158 GIGDFI 163
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -3
Query: 135 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 19
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
LAA ++ G ++ + P + ++ ++R +I GL+ +P SR R R
Sbjct: 7 LAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRHIK 66
Query: 181 RRKGRHCGFGKRRG 222
++KGR G G R+G
Sbjct: 67 KKKGRRRGHGSRKG 80
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 43.2 bits (97), Expect = 0.005
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = -1
Query: 419 LLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYPSS 249
LL L DVL E+ L+LEH+TL L +E ++ +P++L +V +Q + + L+L P S
Sbjct: 82 LLLLHSNDVLQENALILEHVTLSLSIEGLIKVPIDLFVVTVPAQQATEDTLALNPES 138
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 39.9 bits (89), Expect = 0.045
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHSRARVRKNTE 177
LAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V + S R+++ +
Sbjct: 10 LAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-SGGRLKERRK 68
Query: 178 ARR-KGRHCGFGKRRGTANARMPQKELGYK 264
R K G R+G AR K++ K
Sbjct: 69 KRSLKSEGKKSGSRKGKKGARANSKQMWVK 98
>UniRef50_Q4U8F9 Cluster: Phospholipase, putative; n=2;
Theileria|Rep: Phospholipase, putative - Theileria
annulata
Length = 789
Score = 33.9 bits (74), Expect = 2.9
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 348 SCRVSGIDACQSSWQFCTSGAIFLKPF-VFVPKFLLWHTRIGCTSSLTKATVTTLSTCFC 172
S ++ I + +S F S FL P+ + + +L + I CT L+ A+ +LS C+
Sbjct: 206 SIKLVRIGSSRSDIGFSFSPCGFLMPYHLGILSYLCDYNVINCTVPLSGASSGSLSICYS 265
Query: 171 VFADTSAGVYCYRFLDDET 115
V +T +YC +D T
Sbjct: 266 VLKNTF--IYCMNVIDSAT 282
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 5.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 143 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 24
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 33.1 bits (72), Expect = 5.1
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 345 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQ 446
MK KGN+ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>UniRef50_A5E1V3 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 708
Score = 33.1 bits (72), Expect = 5.1
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 155 LVSAKTQKHVERVV-----TVALVREEVQPMRVCHRRNLGTKTKGFKKIAPEVQNCQED* 319
L+S+ ++ ER + L+REE++ R H+R ++TK + + N E
Sbjct: 14 LISSLQEQETEREIGGGKGEARLLREEIERQRALHKRTSSSRTKRKRPFTIHIYNGPESK 73
Query: 320 QASIPLTLHEGE 355
I T+ +GE
Sbjct: 74 SRKIKSTVEDGE 85
>UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF15006, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 340
Score = 32.7 bits (71), Expect = 6.8
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -3
Query: 207 KATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLIDFI 52
KA VT+L C F+D V+C F TI+DH + G +C L+ FI
Sbjct: 62 KANVTSLFICNLSFSDILVCVFCLPFTVIYTIMDHW---VFGSLLCRLVPFI 110
>UniRef50_Q5P3U7 Cluster: Putative uncharacterized protein; n=1;
Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 102
Score = 32.3 bits (70), Expect = 9.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 185 LRASVFLRTRARECTATGFLMTRPSLIILRMFCLELVFAISLISFGSNH 39
LR RTR CT++G L T I C++ + +I+L +FG H
Sbjct: 49 LRPCWAARTRRARCTSSGRLRTVNMAIFTTSLCIQRMHSINLNAFGKWH 97
>UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 662
Score = 32.3 bits (70), Expect = 9.0
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 31 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV 138
K+V + N+ NE N+ N+ KM+KD +V +KPV
Sbjct: 557 KQVVSELNQNNENEPQNNLNNLEKMVKDQIVTEKPV 592
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,215,941
Number of Sequences: 1657284
Number of extensions: 11493067
Number of successful extensions: 32249
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 31234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32224
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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