Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30937
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p pro...   167   8e-42
AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p pro...   167   8e-42
AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB...   167   8e-42
AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA...   167   8e-42
X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal prot...   165   4e-41
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy...    29   6.4  
BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro...    29   6.4  
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,...    29   6.4  
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,...    29   6.4  

>BT024264-1|ABC86326.1|  208|Drosophila melanogaster IP15818p
           protein.
          Length = 208

 Score =  167 bits (407), Expect = 8e-42
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = +1

Query: 1   LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
           LAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEA
Sbjct: 15  LAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEA 74

Query: 181 RRKGRHCGFGKRRGTANARMPQKEL 255
           RRKGRHCGFGKR+GTANARMP K L
Sbjct: 75  RRKGRHCGFGKRKGTANARMPTKLL 99



 Score =  100 bits (239), Expect = 2e-21
 Identities = 49/82 (59%), Positives = 57/82 (69%)
 Frame = +3

Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQC*GPPQ*SEGGTQ 485
           +KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ     Q      +
Sbjct: 117 SKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK 176

Query: 486 APRGTYCRKKEELLQTFAREDE 551
                   KK+EL+   A+EDE
Sbjct: 177 RREERIATKKQELIALHAKEDE 198


>AY061217-1|AAL28765.2|  221|Drosophila melanogaster LD16326p
           protein.
          Length = 221

 Score =  167 bits (407), Expect = 8e-42
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = +1

Query: 1   LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
           LAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEA
Sbjct: 28  LAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEA 87

Query: 181 RRKGRHCGFGKRRGTANARMPQKEL 255
           RRKGRHCGFGKR+GTANARMP K L
Sbjct: 88  RRKGRHCGFGKRKGTANARMPTKLL 112



 Score =  100 bits (239), Expect = 2e-21
 Identities = 49/82 (59%), Positives = 57/82 (69%)
 Frame = +3

Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQC*GPPQ*SEGGTQ 485
           +KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ     Q      +
Sbjct: 130 SKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK 189

Query: 486 APRGTYCRKKEELLQTFAREDE 551
                   KK+EL+   A+EDE
Sbjct: 190 RREERIATKKQELIALHAKEDE 211


>AE013599-4000|AAS64772.1|  203|Drosophila melanogaster CG2746-PB,
           isoform B protein.
          Length = 203

 Score =  167 bits (407), Expect = 8e-42
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = +1

Query: 1   LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
           LAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEA
Sbjct: 10  LAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEA 69

Query: 181 RRKGRHCGFGKRRGTANARMPQKEL 255
           RRKGRHCGFGKR+GTANARMP K L
Sbjct: 70  RRKGRHCGFGKRKGTANARMPTKLL 94



 Score =  100 bits (239), Expect = 2e-21
 Identities = 49/82 (59%), Positives = 57/82 (69%)
 Frame = +3

Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQC*GPPQ*SEGGTQ 485
           +KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ     Q      +
Sbjct: 112 SKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK 171

Query: 486 APRGTYCRKKEELLQTFAREDE 551
                   KK+EL+   A+EDE
Sbjct: 172 RREERIATKKQELIALHAKEDE 193


>AE013599-3999|AAF47305.1|  203|Drosophila melanogaster CG2746-PA,
           isoform A protein.
          Length = 203

 Score =  167 bits (407), Expect = 8e-42
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = +1

Query: 1   LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
           LAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEA
Sbjct: 10  LAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEA 69

Query: 181 RRKGRHCGFGKRRGTANARMPQKEL 255
           RRKGRHCGFGKR+GTANARMP K L
Sbjct: 70  RRKGRHCGFGKRKGTANARMPTKLL 94



 Score =  100 bits (239), Expect = 2e-21
 Identities = 49/82 (59%), Positives = 57/82 (69%)
 Frame = +3

Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQC*GPPQ*SEGGTQ 485
           +KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ     Q      +
Sbjct: 112 SKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK 171

Query: 486 APRGTYCRKKEELLQTFAREDE 551
                   KK+EL+   A+EDE
Sbjct: 172 RREERIATKKQELIALHAKEDE 193


>X74776-1|CAA52784.1|  203|Drosophila melanogaster ribosomal protein
           L19 protein.
          Length = 203

 Score =  165 bits (401), Expect = 4e-41
 Identities = 77/92 (83%), Positives = 83/92 (90%)
 Frame = +1

Query: 1   LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEA 180
           LAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKNTEA
Sbjct: 10  LAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEA 69

Query: 181 RRKGRHCGFGKRRGTANARMPQKELGYKDKGF 276
           RRK RHCGFGKR+GTANARMP K L  + + F
Sbjct: 70  RRKDRHCGFGKRKGTANARMPTKLLWMQRQPF 101



 Score =  100 bits (239), Expect = 2e-21
 Identities = 49/82 (59%), Positives = 57/82 (69%)
 Frame = +3

Query: 306 AKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQC*GPPQ*SEGGTQ 485
           +KKIDRHLYH LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ     Q      +
Sbjct: 112 SKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK 171

Query: 486 APRGTYCRKKEELLQTFAREDE 551
                   KK+EL+   A+EDE
Sbjct: 172 RREERIATKKQELIALHAKEDE 193


>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
           dynein heavy chian protein.
          Length = 4639

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 61  NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 162
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p
           protein.
          Length = 1312

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 61  NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 162
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
           isoform B protein.
          Length = 3388

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 61  NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 162
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
           isoform A protein.
          Length = 4639

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 61  NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 162
           N++  TNSR      IK GLV++   ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,070,818
Number of Sequences: 53049
Number of extensions: 555333
Number of successful extensions: 1809
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1804
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)