Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30935
(783 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 73 6e-14
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 68 2e-12
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 66 7e-12
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 62 9e-11
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 60 4e-10
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 54 2e-08
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 52 7e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 52 1e-07
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 43 6e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 43 6e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 42 1e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 38 0.002
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 33 0.046
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.19
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 31 0.25
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 29 0.57
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 27 3.0
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 26 5.3
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 26 7.0
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 26 7.0
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 26 7.0
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 25 9.3
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 25 9.3
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 25 9.3
SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor Vp... 25 9.3
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 72.5 bits (170), Expect = 6e-14
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +2
Query: 8 EVCKKAFARIYYLKKHLRTHTAEKPYVCEV--CEKQFALFDYLKTHMATHTAEKPYVC-- 175
E C K ++R L++HLRTH+ E+P+VC+ C K F +LK H HT KP+ C
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHY 87
Query: 176 EVCEKGFARLYHLKTHLRIHTREKPF 253
+ C+ F HL+ H+ +H + KP+
Sbjct: 88 DGCDAQFYTQQHLERHIEVHRKPKPY 113
Score = 52.8 bits (121), Expect = 5e-08
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +1
Query: 241 RETFCC--EVCNRGFNHISHLRTHMRTHTGEKPYFCEL--CKKGFSRISNLKSHMRIHT* 408
++ F C E C + ++ S L H+RTH+ E+P+ C+ C K F R S+LK H R HT
Sbjct: 20 KKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTN 79
Query: 409 GKP 417
KP
Sbjct: 80 VKP 82
Score = 48.4 bits (110), Expect = 1e-06
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Frame = +2
Query: 14 CKKAFARIYYLKKHLRTHTAEKPYVC--EVCEKQFALFDYLKTHM-ATHTAEKPYVC--E 178
C F +L++H+ H KPY C E C++ F+ L++H+ A HT PY C +
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQ 149
Query: 179 VCEKGFARLYHLKTHL-RIHTR 241
CE FA L+ H+ R H +
Sbjct: 150 DCELRFATKQKLQNHVNRAHEK 171
Score = 45.6 bits (103), Expect = 8e-06
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +1
Query: 232 THKRET-FCCEV--CNRGFNHISHLRTHMRTHTGEKPYFCEL--CKKGFSRISNLKSHMR 396
TH E F C+ C++ F SHL+ H R HT KP+ C C F +L+ H+
Sbjct: 46 THSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIE 105
Query: 397 IHT*GKP 417
+H KP
Sbjct: 106 VHRKPKP 112
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = +1
Query: 256 CEVCNRGFNHISHLRTHMRTH----TGEKPYFC--ELCKKGFSRISNLKSHMRI 399
C +C R F +HLR H+ H K Y C E CKK F+R S LK H+ +
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISV 259
Score = 39.5 bits (88), Expect = 5e-04
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 8 EVCKKAFARIYYLKKHLRT-HTAEKPYVCEVCEKQFALFDYLKTHMATHT---AEKPYVC 175
E CKK+F R LKKH+ H + C+ C +F L+ H+ T A KPY+
Sbjct: 241 EGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYIN 300
Query: 176 E 178
E
Sbjct: 301 E 301
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Frame = +1
Query: 196 CTTVSFKNTLKNTHKR-----ETFCCEV--CNRGFNHISHLRTHMRTHTGEKPYFC--EL 348
C+ ++ + HKR + F C C+ F HL H+ H KPY C E
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEG 119
Query: 349 CKKGFSRISNLKSHM 393
C + FS+ L+SH+
Sbjct: 120 CDECFSKHQQLRSHI 134
Score = 36.7 bits (81), Expect = 0.004
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +2
Query: 20 KAFARIYYLKKHLRTHTAEKPYVCEVCEKQFALFDYLKTHMATH--TAE--KPYVC--EV 181
+ F + L+ H+R A P C +C +QF +L+ H+ H T E K Y C E
Sbjct: 186 EGFEKWSQLQNHIRE--AHVPS-CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEG 242
Query: 182 CEKGFARLYHLKTHLRI 232
C+K F R LK H+ +
Sbjct: 243 CKKSFTRSSALKKHISV 259
Score = 32.7 bits (71), Expect = 0.061
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2
Query: 152 TAEKPYVC--EVCEKGFARLYHLKTHLRIHTREKPFV 256
+A+K + C E C K ++R L+ HLR H+ E+PFV
Sbjct: 18 SAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFV 54
Score = 29.5 bits (63), Expect = 0.57
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Frame = +2
Query: 14 CKKAFARIYYLKKHL-RTHTAEKPYVC--EVC--EKQFALFDYLKTHMATHTAEKPYVCE 178
C+ FA L+ H+ R H Y C E C + F + L+ H+ A P C
Sbjct: 151 CELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHI--REAHVPS-CS 207
Query: 179 VCEKGFARLYHLKTHLRIH 235
+C + F HL+ H+ +H
Sbjct: 208 ICGRQFKTAAHLRHHVVLH 226
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 338 FVNCAKKVFLELVI*NHT*EYILEENRVCEI--CNKGFEQIGNLRMFLRIHNAEKP 499
+ C KK ++ H + E VC+ C+K F + +L++ R H KP
Sbjct: 27 YEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKP 82
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/72 (38%), Positives = 38/72 (52%)
Frame = +2
Query: 14 CKKAFARIYYLKKHLRTHTAEKPYVCEVCEKQFALFDYLKTHMATHTAEKPYVCEVCEKG 193
C K F R Y LK H+ THT +P+ C +C+K FA + H HT K + C C +
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 194 FARLYHLKTHLR 229
FAR+ L H +
Sbjct: 637 FARMDALNRHYK 648
Score = 56.0 bits (129), Expect = 6e-09
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 83 YVCEV--CEKQFALFDYLKTHMATHTAEKPYVCEVCEKGFARLYHLKTHLRIHTREKPFV 256
YVC C K+F LK+HM THT +P+ C +C+K FAR + + H ++HT K F
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFA 629
Query: 257 -VKC 265
V C
Sbjct: 630 CVTC 633
Score = 54.0 bits (124), Expect = 2e-08
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1
Query: 265 CNRGFNHISHLRTHMRTHTGEKPYFCELCKKGFSRISNLKSHMRIHT 405
CN+ F +L++HM THT +P+ C +CKK F+R + + H ++HT
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHT 623
Score = 48.0 bits (109), Expect = 2e-06
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +2
Query: 5 CEVCKKAFARIYYLKKHLRTHTAEKPYVCEVCEKQFALFDYLKTHMATHTAE 160
C +CKK+FAR + ++H + HT K + C C ++FA D L H + +
Sbjct: 602 CSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQ 653
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 229 NTHKR-ETFCCEVCNRGFNHISHLRTHMRTHTGEKPYFCELCKKGFSRISNLKSHMRIHT 405
NTH F C +C + F R H + HTG K + C C + F+R+ L H +
Sbjct: 592 NTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEV 651
Query: 406 *GKPCL 423
G+ CL
Sbjct: 652 -GQNCL 656
Score = 31.5 bits (68), Expect = 0.14
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 334 YFCEL--CKKGFSRISNLKSHMRIHT*GKP 417
Y C C K F+R NLKSHM HT +P
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRP 599
Score = 29.1 bits (62), Expect = 0.75
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 501 SLCKHKKGFRQIHS*KRHLLTHTSVKLSICEVCEK 605
S+CK K F + H +RH HT +K C C +
Sbjct: 603 SICK--KSFARQHDKRRHEQLHTGIKAFACVTCNQ 635
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 519 KGFRQIHS*KRHLLTHTSVKLSICEVCEK 605
K F + ++ K H+ THT+ + C +C+K
Sbjct: 579 KRFTRAYNLKSHMNTHTNYRPFQCSICKK 607
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 65.7 bits (153), Expect = 7e-12
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +2
Query: 14 CKKAFARIYYLKKHLRTHTAEKPYVCEVCEKQFALFDYLKTHMATHTAEKPYVCEVCEKG 193
C K AR Y ++ H++TH +++PY C++C+ F LK H+ H +PYVCE C K
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKR 508
Query: 194 FARLYHLKTH 223
F RL L H
Sbjct: 509 FNRLDALNRH 518
Score = 64.9 bits (151), Expect = 1e-11
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Frame = +2
Query: 71 AEKPYVC--EVCEKQFALFDYLKTHMATHTAEKPYVCEVCEKGFARLYHLKTHLRIHTRE 244
A+ YVC C K+ A +++H+ TH +++PY C++C+ GF R + LK HLRIH
Sbjct: 439 ADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG 498
Query: 245 KPFVVKCV 268
+P+V +C+
Sbjct: 499 RPYVCECL 506
Score = 57.6 bits (133), Expect = 2e-09
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 265 CNRGFNHISHLRTHMRTHTGEKPYFCELCKKGFSRISNLKSHMRIHT*GKP 417
CN+ ++ +H++TH ++PY C+LCK GF R +LK H+RIH G+P
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRP 500
Score = 50.0 bits (114), Expect = 4e-07
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +2
Query: 5 CEVCKKAFARIYYLKKHLRTHTAEKPYVCEVCEKQFALFDYLKTH 139
C++CK F R + LK+HLR H +PYVCE C K+F D L H
Sbjct: 475 CDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 160 KTLCL-RSVRERLCTTVSFKNTLKNTHKRETFCCEVCNRGFNHISHLRTHMRTHTGEKPY 336
K +CL +R+ + ++ ++ + C++C GF L+ H+R H +PY
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPY 501
Query: 337 FCELCKKGFSRISNLKSH 390
CE C K F+R+ L H
Sbjct: 502 VCE-CLKRFNRLDALNRH 518
Score = 33.1 bits (72), Expect = 0.046
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +2
Query: 335 IFVNCAKKVFLELVI*NHT*EYILEENRVCEICNKGFEQIGNLRMFLRIHNAEKPEFV*T 514
++ C K++ + + +H ++ + C++C GF + +L+ LRIH +P
Sbjct: 446 LYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCEC 505
Query: 515 *KRF 526
KRF
Sbjct: 506 LKRF 509
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 516 KKGFRQIHS*KRHLLTHTSVKLSICEVCEK 605
K GF + H KRHL H + + +CE ++
Sbjct: 479 KAGFVRHHDLKRHLRIHENGRPYVCECLKR 508
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 62.1 bits (144), Expect = 9e-11
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +1
Query: 199 TTVSFKNTLKNTHKRETFCCEVCNRGFNHISHLRTHMRTHTGEKPYFCEL--CKKGFSRI 372
TT + KN + C +C + F + H H+RTHTGEKP+ C C K FSR
Sbjct: 9 TTGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRS 68
Query: 373 SNLKSHMRIHT 405
L H RIHT
Sbjct: 69 DELTRHARIHT 79
Score = 57.2 bits (132), Expect = 2e-09
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 71 AEKPYVCEVCEKQFALFDYLKTHMATHTAEKPYVCEV--CEKGFARLYHLKTHLRIHT 238
A +PY C +C K F ++ H+ THT EKP+VC C K F+R L H RIHT
Sbjct: 22 APRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 55.2 bits (127), Expect = 1e-08
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +2
Query: 5 CEVCKKAFARIYYLKKHLRTHTAEKPYVCEV--CEKQFALFDYLKTHMATHT 154
C +C KAF R+ + +H+RTHT EKP+VC C K+F+ D L H HT
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 155 AEKPYVCEVCEKGFARLYHLKTHLRIHTREKPFV 256
A +PY C +C K F RL H H+R HT EKP V
Sbjct: 22 APRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHV 55
Score = 35.5 bits (78), Expect = 0.009
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 328 KPYFCELCKKGFSRISNLKSHMRIHT*GKP 417
+PY C LC K F R+ + H+R HT KP
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKP 53
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 422 CEICNKGFEQIGNLRMFLRIHNAEKP 499
C +C K F ++ + +R H EKP
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKP 53
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 60.1 bits (139), Expect = 4e-10
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 214 KNTLKNTHKRETFCCEVCNRGFNHISHLRTHMRT-HTGEKPYFCELCKKGFSRISNLKSH 390
K ++ + ++F C C++ F HLR H+R+ HT EKP+ C +C K FSR NL+ H
Sbjct: 411 KTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH 469
Query: 391 MRIHT*GKPCL 423
R+H P L
Sbjct: 470 ERLHVNASPRL 480
Score = 55.6 bits (128), Expect = 8e-09
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 77 KPYVCEVCEKQFALFDYLKTHM-ATHTAEKPYVCEVCEKGFARLYHLKTHLRIHTREKP 250
K +VC C K+F ++L+ H+ + HT+EKP+VC +C K F+R +L+ H R+H P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 53.6 bits (123), Expect = 3e-08
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 VCEVCKKAFARIYYLKKHLRT-HTAEKPYVCEVCEKQFALFDYLKTHMATHTAEKP 166
VC C K F R +L++H+R+ HT+EKP+VC +C K+F+ D L+ H H P
Sbjct: 424 VCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 131 KTHMATHTAEKPYVCEVCEKGFARLYHLKTHLR-IHTREKPFVVKC 265
KT + K +VC C K F R HL+ H+R +HT EKPFV C
Sbjct: 411 KTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCIC 456
Score = 32.7 bits (71), Expect = 0.061
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 289 SHLRTHMRTHTGEKPYFCELCKKGFSRISNLKSHMR-IHT*GKP 417
S+ +T + G K + C C K F R +L+ H+R +HT KP
Sbjct: 408 SNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKP 451
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 419 VCEICNKGFEQIGNLRMFLR-IHNAEKPEFV*T*KRF 526
VC C+K F++ +LR +R +H +EKP KRF
Sbjct: 424 VCPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRF 460
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 54.4 bits (125), Expect = 2e-08
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 161 KPYVCEVCEKGFARLYHLKTHLRIHTREKPFVVKCVIGVLT 283
K YVCE C + FARL HLK H+R HT EKPF + G+ T
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPT 108
Score = 53.2 bits (122), Expect = 4e-08
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Frame = +2
Query: 2 VCEVCKKAFARIYYLKKHLRTHTAEKPYVC-EV------CEKQFALFDYLKTH 139
VCE C +AFAR+ +LK+H+R+HT EKP+ C E+ C +QF+ D L H
Sbjct: 71 VCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
Score = 49.2 bits (112), Expect = 7e-07
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Frame = +1
Query: 199 TTVSFKNTLKNTHKRETFCCEVCNRGFNHISHLRTHMRTHTGEKPYFC-EL------CKK 357
+T + K+ K + + CE C R F + HL+ H+R+HT EKP+ C E+ C +
Sbjct: 53 STAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGR 112
Query: 358 GFSRISNLKSH-MRIHT*GKP 417
FSR L H +IH +P
Sbjct: 113 QFSRRDLLLRHQQKIHRNPQP 133
Score = 48.4 bits (110), Expect = 1e-06
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Frame = +2
Query: 77 KPYVCEVCEKQFALFDYLKTHMATHTAEKPYVC-EV------CEKGFARLYHLKTH-LRI 232
K YVCE C + FA ++LK H+ +HT EKP+ C E+ C + F+R L H +I
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 233 HTREKP 250
H +P
Sbjct: 128 HRNPQP 133
Score = 31.1 bits (67), Expect = 0.19
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 419 VCEICNKGFEQIGNLRMFLRIHNAEKP 499
VCE C + F ++ +L+ +R H EKP
Sbjct: 71 VCETCTRAFARLEHLKRHIRSHTNEKP 97
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 52.4 bits (120), Expect = 7e-08
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +1
Query: 256 CEVCNRGFNHISHLRTHMRTHTGEKPYFCEL--CKKGFSRISNLKSHMRIH 402
C C +GF+ S L+ H +HTGE+P+ C+ C K F+ SN++ H RIH
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 42.3 bits (95), Expect = 8e-05
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 83 YVCEVCEKQFALFDYLKTHMATHTAEKPYVCEV--CEKGFARLYHLKTHLRIH 235
Y C C + F+ LK H +HT E+P+VC+ C K F +++ H RIH
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 5 CEVCKKAFARIYYLKKHLRTHTAEKPYVCEV--CEKQFALFDYLKTHMATH 151
C C + F+R LK H +HT E+P+VC+ C K F + ++ H H
Sbjct: 470 CTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 34.3 bits (75), Expect = 0.020
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 167 YVCEVCEKGFARLYHLKTHLRIHTREKPFV 256
Y C C +GF+R LK H HT E+PFV
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFV 497
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 289 SHLRTHMRTHTGEKPYFCELCKKGFSRISNLKSHMRIHT*GKP 417
SH + + Y C C +GFSR S+LK H HT +P
Sbjct: 453 SHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERP 495
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 51.6 bits (118), Expect = 1e-07
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 244 ETFCCEVCNRGFNHISHLRTHMRTHTGEKPYFCEL--CKKGFSRISNLKSHMRIH 402
+++ C C R F+ H H+R+HTGEKP+ C CKK F+R L H+R H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 48.8 bits (111), Expect = 9e-07
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +2
Query: 5 CEVCKKAFARIYYLKKHLRTHTAEKPYVCEV--CEKQFALFDYLKTHMATH 151
C CK+ F R + +H+R+HT EKP+ C C+K+F D L H+ TH
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 46.0 bits (104), Expect = 6e-06
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 77 KPYVCEVCEKQFALFDYLKTHMATHTAEKPYVCEV--CEKGFARLYHLKTHLRIHTRE 244
K Y C C++ F ++ H+ +HT EKP+ C C+K F R L H+R H R+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 161 KPYVCEVCEKGFARLYHLKTHLRIHTREKPF 253
K Y C C++ F R H H+R HT EKPF
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPF 32
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 328 KPYFCELCKKGFSRISNLKSHMRIHT*GKP 417
K Y C CK+ F R + H+R HT KP
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKP 31
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 38 YYLKKHLRTHTAEKPYVCEV--CEKQFALFDYLKTHMAT-HTAE 160
+ L HLR+HT EKP++C V C++ F D L HM T H A+
Sbjct: 91 FALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
Score = 41.1 bits (92), Expect = 2e-04
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 295 LRTHMRTHTGEKPYFCEL--CKKGFSRISNLKSHMR 396
L H+R+HTGEKP+ C + C + F+R L HMR
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 128 LKTHMATHTAEKPYVCEV--CEKGFARLYHLKTHLR 229
L H+ +HT EKP++C V C++ F R L H+R
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
Frame = +2
Query: 167 YVCEV--C-EKGFARL--YHLKTHLRIHTREKPFV 256
Y CE C KG + + L HLR HT EKPF+
Sbjct: 73 YTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFI 107
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 42.7 bits (96), Expect = 6e-05
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 14 CKKAFARIYYLKKHLRTHTAEKPYVCEVCEKQFALFDYLKTHMATHTAEKPYVCE 178
C K+F R +L++H RTH K + C C + FA D L H+ +K + E
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQNLSE 87
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 265 CNRGFNHISHLRTHMRTHTGEKPYFCELCKKGFSRISNLKSHMR 396
C + F HLR H RTH K + C C + F+R L H++
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 41.1 bits (92), Expect = 2e-04
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 44 LKKHLRTHTAEKP-YVCEV--CEKQFALFDYLKTHMATHTAEKPYVCEVCEKGFARLYHL 214
LKK R H P + C C K F ++L+ H TH K + C C + FAR L
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 215 KTHLR 229
H++
Sbjct: 72 NRHVQ 76
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +2
Query: 128 LKTHMATHTAEKP-YVCEV--CEKGFARLYHLKTHLRIHTREKPF 253
LK H P + C C K F R HL+ H R H K F
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAF 56
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 295 LRTHMRTHT-GEKPYFCEL--CKKGFSRISNLKSHMRIH 402
L+ R H G+ ++C C K F+R +L+ H R H
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTH 50
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 41.5 bits (93), Expect = 1e-04
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 14 CKKAFARIYYLKKHLRTHTAEKPYVCEVCEKQFALFDYLKTHM 142
C K+F R + ++H R+HT K ++C C F D L H+
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 41.1 bits (92), Expect = 2e-04
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 265 CNRGFNHISHLRTHMRTHTGEKPYFCELCKKGFSRISNLKSHM 393
C + F H R H R+HT K + C C F+R L H+
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 35.5 bits (78), Expect = 0.009
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 83 YVCEV--CEKQFALFDYLKTHMATHTAEKPYVCEVCEKGFARLYHLKTHL 226
Y C+ C K F ++ + H +HT K ++C C F R L H+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 31.1 bits (67), Expect = 0.19
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +2
Query: 167 YVCEV--CEKGFARLYHLKTHLRIHTREKPFV 256
Y C+ C K F R H + H R HT K F+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFI 48
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 322 GEKPYFCEL--CKKGFSRISNLKSHMRIHT*GK 414
G+ Y C+ C K F+R + + H R HT K
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSK 45
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 71 AEKPYVCEVCEKQFALFDYLKTHMATHTAEKPYVCEVCEKGFARLYHLKTHLRIHTREKP 250
+++ + C+ C K+F + L H A H+ +P C CE R LK H++ +K
Sbjct: 27 SKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKS 86
Query: 251 FV 256
+
Sbjct: 87 VI 88
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +2
Query: 5 CEVCKKAFARIYYLKKHLRTHTAEKPYVCEVCEKQFALFDYLKTHMATHTAEKPYVCE 178
C+ C K F R L +H H+ +P C CE + D LK H+ +K + E
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSVIEE 90
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 340 CELCKKGFSRISNLKSHMRIHT*GKP 417
C+ C K F+R NL H H+ +P
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEP 58
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 33.1 bits (72), Expect = 0.046
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 8 EVCKKAFARIYYLKKHLRT-HTAEKP-YVCEVC--EKQFALFDYLKTHM 142
E+C F+R Y L +H T H +P + CE+C ++ F+ D L H+
Sbjct: 583 EICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHL 631
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.1 bits (67), Expect = 0.19
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 137 HMATHTAEKPYVCEVCEKGFARLYHLKTHLRIHT 238
H KPY CEVC K + L LK H R H+
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 328 KPYFCELCKKGFSRISNLKSHMRIHT 405
KPY CE+C K + ++ LK H R H+
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 77 KPYVCEVCEKQFALFDYLKTHMATHT 154
KPY CEVC K++ + LK H TH+
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +1
Query: 238 KRETFCCEVCNRGFNHISHLRTHMRTHT 321
+ + + CEVC++ + +++ L+ H RTH+
Sbjct: 395 ENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 5 CEVCKKAFARIYYLKKHLRTHT 70
CEVC K + + LK H RTH+
Sbjct: 401 CEVCSKRYKNLNGLKYH-RTHS 421
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3
Query: 721 IILNLWPKILFYTLPHTWFGL 659
I +NL PK LFY L WFGL
Sbjct: 998 IYVNLLPKPLFYLLSRLWFGL 1018
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 29.5 bits (63), Expect = 0.57
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 44 LKKHLRTHTAEKPYVCEVCEKQFALFDYLKTHMATHTAEKPYVCEVC 184
++ +R K YVC C K+F+ D L + T E + C VC
Sbjct: 123 VEDRMRNDFDSKGYVCPFCNKKFSSLDVL----SLVTNEGTFACNVC 165
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +1
Query: 124 LFKNTYGDTYSRK--TLCLRSVR--ERLCTTVSFKNTLKNTHKRETFCCEVCNRGFNH 285
+F+ + + S K T+C R + +R T +SF + HK + FCC C++G H
Sbjct: 2 IFRKSISKSPSSKGSTVCFRCGQAFQRRETPISFGGHM--WHK-DCFCCTKCDKGLEH 56
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 482 VFSETFLNYQFVQSLYYRFHKHGFPQVCILMCDFKL 375
V S+T + + QSLY R K C+L +++
Sbjct: 1550 VLSKTSAKFGYSQSLYVRMFKQHNESACLLSIQYRM 1585
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 244 ETFCCEVCNRGFNHISHLRTHMRTHTGEK 330
E F CEVC + F I+ H ++ K
Sbjct: 241 EAFYCEVCQKFFGKITVFEAHKKSKAHNK 269
Score = 25.8 bits (54), Expect = 7.0
Identities = 7/21 (33%), Positives = 16/21 (76%)
Frame = +1
Query: 334 YFCELCKKGFSRISNLKSHMR 396
++CE+C+K F +I+ ++H +
Sbjct: 243 FYCEVCQKFFGKITVFEAHKK 263
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 250 FCCEVCNRGFNHISHLRTHMR 312
F C CNR F + +R HM+
Sbjct: 259 FTCLTCNREFKSLEAVRAHMQ 279
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +1
Query: 256 CEVCNRGFNHISHLRTHMRTHTGEKPY 336
C CN FNH + L H T + P+
Sbjct: 177 CSKCNTTFNHSTALMMHEATCLNQVPF 203
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 647 IINMCVLKLLVESHFFTYFTNRKFY 573
++N+C+LKL + H FT Y
Sbjct: 163 LLNLCILKLAAKLHLSALFTTCLIY 187
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = -2
Query: 200 VQSLSRTLRKHKVFLLYVSPYVFLNNQIMQIVFRTLHKHKVFRQYVFVDVFLN 42
+ + L ++ F + PYV N+I+ +V + + Q+ FVD+ L+
Sbjct: 252 LNGIGNILTEYDAFSVGEMPYVLDTNEILHVVGADRRELTMIFQFDFVDLDLD 304
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 25.4 bits (53), Expect = 9.3
Identities = 9/38 (23%), Positives = 19/38 (50%)
Frame = -2
Query: 524 TFFMFTQTQVFLHCVFSETFLNYQFVQSLYYRFHKHGF 411
+ FMFT + ++ ++ FL + ++ H+H F
Sbjct: 638 SLFMFTICNLLMYYLYGSPFLEHTYLYHFGRTDHRHNF 675
>SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor
Vps902 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 422 CEICNKGFEQIGNLRMFLRIHNAE 493
C +C GF I +L LR NA+
Sbjct: 226 CILCYPGFHLISHLNFVLRFRNAD 249
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,481,292
Number of Sequences: 5004
Number of extensions: 79125
Number of successful extensions: 335
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -