Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30933
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 163 1e-40
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 163 2e-40
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 162 3e-40
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 155 3e-38
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 74 1e-13
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 74 1e-13
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 74 1e-13
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 73 2e-13
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 73 2e-13
03_01_0034 + 318432-318825,318902-319851 73 2e-13
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 73 2e-13
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 73 2e-13
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 51 8e-07
05_05_0013 - 21509307-21509493,21509762-21510123 34 0.10
12_02_1070 - 25814741-25815850 30 1.7
01_01_1149 - 9134390-9134600,9134732-9134790,9135650-9135724,913... 29 2.9
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664... 29 5.1
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 5.1
02_01_0072 - 502785-504038 29 5.1
12_02_0699 + 22245933-22246213,22246493-22246575,22246844-222471... 28 6.7
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 28 6.7
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 28 6.7
09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190 28 8.9
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 163 bits (396), Expect = 1e-40
Identities = 92/159 (57%), Positives = 106/159 (66%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
EKAYHEQLSVAEITN+ F P+ KCDPR GKYM CC RGDVV K N
Sbjct: 279 EKAYHEQLSVAEITNSAFE-PSSMMAKCDPRH-GKYM---ACCLMYRGDVVP----KDVN 329
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ ++ FV W GF+ + P P G
Sbjct: 330 AAVATIKTKRTIQFV--DWCPTGFKCGINYQPPSVVPSG 366
Score = 122 bits (295), Expect = 2e-28
Identities = 57/92 (61%), Positives = 72/92 (78%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
LEH+D A ++DNEAIYDICRR+LD+ +PT T
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIE-RPTYT 225
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 163 bits (395), Expect = 2e-40
Identities = 92/159 (57%), Positives = 106/159 (66%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
EKAYHEQLSVAEITN+ F P+ KCDPR GKYM CC RGDVV K N
Sbjct: 279 EKAYHEQLSVAEITNSAFE-PSSMMAKCDPRH-GKYM---ACCLMYRGDVVP----KDVN 329
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ ++ FV W GF+ + P P G
Sbjct: 330 AAVATIKTKRTIQFV--DWCPTGFKCGINYQPPSVVPGG 366
Score = 122 bits (295), Expect = 2e-28
Identities = 57/92 (61%), Positives = 72/92 (78%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
LEH+D A ++DNEAIYDICRR+LD+ +PT T
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIE-RPTYT 225
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 162 bits (393), Expect = 3e-40
Identities = 93/159 (58%), Positives = 105/159 (66%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
EKAYHEQLSV EITNA F P+ KCDPR GKYM CC RGDVV K N
Sbjct: 279 EKAYHEQLSVPEITNAVFE-PSSMMAKCDPRH-GKYM---ACCLMYRGDVVP----KDVN 329
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ ++ FV W GF+ + P P G
Sbjct: 330 AAVATIKTKRTVQFV--DWCPTGFKCGINYQPPSVVPGG 366
Score = 124 bits (299), Expect = 7e-29
Identities = 59/92 (64%), Positives = 72/92 (78%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
LEH+D A ++DNEAIYDICRR+LD+ +PT T
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIE-RPTYT 225
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 155 bits (376), Expect = 3e-38
Identities = 78/111 (70%), Positives = 88/111 (79%), Gaps = 2/111 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRLI Q++SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS
Sbjct: 300 IERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISV 359
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVV 580
EKA+HEQ SV EITN+ F PA KCDPR GKYM CC RGDVV
Sbjct: 360 EKAFHEQHSVPEITNSVFE-PASVMAKCDPRH-GKYM---ACCLMYRGDVV 405
Score = 98.7 bits (235), Expect = 4e-21
Identities = 54/113 (47%), Positives = 71/113 (62%), Gaps = 21/113 (18%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQ------------------ 128
FL+F+ LL+ERLSVDYG+KSKL F IYP+PQ
Sbjct: 195 FLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQYFFMSSSCMHIMSDTQIS 254
Query: 129 ---VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
+STAVVEPYNS+L+TH+ +EH+D ++DNEAIYDIC+R+LD+ +PT T
Sbjct: 255 QCKISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIE-RPTYT 306
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPT 272
+E++D ++DNEA+YDIC R L L A PT
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL-ATPT 221
Score = 74.1 bits (174), Expect = 1e-13
Identities = 44/127 (34%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRALTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMLN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPT 272
+E++D ++DNEA+YDIC R L L A PT
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL-ATPT 221
Score = 74.1 bits (174), Expect = 1e-13
Identities = 44/127 (34%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRALTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMLN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPT 272
+E++D ++DNEA+YDIC R L L A PT
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL-ATPT 221
Score = 74.1 bits (174), Expect = 1e-13
Identities = 44/127 (34%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRALTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMLN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 313 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 372
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L L+
Sbjct: 373 VENADECMVLDNEALYDICFRTLKLT 398
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 396 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 455
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 456 RGSQQYRALTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMIN 512
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 513 VQNKNSS 519
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 149 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 208
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L L+
Sbjct: 209 VENADECMVLDNEALYDICFRTLKLT 234
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 232 KLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 291
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 292 RGSQQYRALTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGRMSTKEVDEQMIN 348
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 349 VQNKNSS 355
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L L+
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLT 218
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRALTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMLN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 154 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 213
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L L+
Sbjct: 214 VENADECMVLDNEALYDICFRTLKLT 239
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 237 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 296
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 297 RGSQQYRALTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMIN 353
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 354 VQNKNSS 360
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L L+
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLT 218
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRALTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMIN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV 424
L PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 220 LANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL 276
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHT 179
F++ H L+E L+ Y KK ++++P + S VV+PYNS+LT
Sbjct: 135 FVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKR 194
Query: 180 TLEHSDCAFMVDNEAIYDICRRNLDLSAQPT 272
++DC ++DN A+ I L L A PT
Sbjct: 195 LTLNADCVVVLDNTALNRIAVERLHL-ANPT 224
>05_05_0013 - 21509307-21509493,21509762-21510123
Length = 182
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 457 KLFMVGL--LGRDDWRVRDQWEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDET 284
+LF+ GL GR DWR +W V T QV+ + I+ A S R + ++ D T
Sbjct: 121 RLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFIRQANASSRGDSKRKSIHDIT 180
>12_02_1070 - 25814741-25815850
Length = 369
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 573 SPRLQHTGKPMYLPIDRGSHFTSGLAGARKH 481
SPRL GK ++ + R S S LAG R+H
Sbjct: 254 SPRLNAAGKVVFNGLGRSSSSPSSLAGGRRH 284
>01_01_1149 -
9134390-9134600,9134732-9134790,9135650-9135724,
9135815-9135934,9136012-9136183,9136277-9136335,
9136516-9136572,9136900-9136998,9137088-9137114,
9137607-9137649,9137779-9138023
Length = 388
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -1
Query: 505 WFGRGSKACVCDLGDGKLFMVGLLGRDDWRVRDQWEVDTGVRHQ 374
W K C+C DG +GLL W V + ++ T +H+
Sbjct: 23 WAQTYLKYCLCSTRDGMALTLGLLSVISWGVAEVPQIITNYKHK 66
>09_06_0328 +
22365308-22365415,22365743-22366018,22366166-22366417,
22366542-22366939,22367028-22368021,22368199-22368409,
22368515-22368749,22368874-22368996,22369190-22369310,
22369416-22369625
Length = 975
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +3
Query: 375 WCLTPVSTSHWSRTRQSSLPRRPTMNSFPSPRSQTHAFEPRPNQM*NATPGQWASTWACL 554
W L + HWS++ S+ RR + + TH F+ + G+W++T+ L
Sbjct: 199 WSLAHRTEGHWSKSLGSTFFRRLAWSPCGHFITTTHGFQKPRHSAPVLERGEWSATFDFL 258
Query: 555 --YAVTVVTSLPQGCERRAIG*HQKTKA 632
A VV R+ + Q KA
Sbjct: 259 GHNAPVVVVKFNHSMFRKHLSSGQDAKA 286
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 338 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 466
A ++D T +N VPY + TY P ++ K E+ S A
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTA 168
>02_01_0072 - 502785-504038
Length = 417
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -1
Query: 739 PPPGPTHRLGWPGLVEYR---TLETRFGPPSSDEIGIVTAL 626
PPP PT +G+ GL+ +R T F P DE+ ++ AL
Sbjct: 6 PPPPPTG-MGFLGLLSFRRSATAVASFDPAQDDELQVLHAL 45
>12_02_0699 +
22245933-22246213,22246493-22246575,22246844-22247125,
22248725-22248986,22250146-22251781,22251910-22252416
Length = 1016
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 478 RMLSSPGQTRCEMRPPVNGQVHGLACM 558
R++ +PGQT E+R ++G V +A M
Sbjct: 676 RLVDAPGQTGKELRRKISGDVEAMASM 702
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 421 WRVRDQ--WEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDETIQVGV 269
WR+ D WEVDT H ++ H + + S D+ + D T + G+
Sbjct: 231 WRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGI 283
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 421 WRVRDQ--WEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDETIQVGV 269
WR+ D WEVDT H ++ H + + S D+ + D T + G+
Sbjct: 231 WRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGI 283
>09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190
Length = 1218
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -1
Query: 421 WRVRDQ--WEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDETIQVGV 269
WR+ D WEVDT H ++ H + + S D+ + D T + G+
Sbjct: 231 WRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGI 283
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,083,529
Number of Sequences: 37544
Number of extensions: 593633
Number of successful extensions: 1815
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1814
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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