Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30933
(739 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 68 3e-13
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 68 3e-13
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 68 3e-13
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 68 3e-13
AJ304410-1|CAC67443.1| 190|Anopheles gambiae calpain protein. 24 5.6
DQ383819-1|ABD38144.1| 377|Anopheles gambiae abdominal-B protein. 23 7.4
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 7.4
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 9.8
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 67.7 bits (158), Expect = 3e-13
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
++ P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 171
Query: 431 AEKAYHEQLSVAEIT 475
+ L+V E+T
Sbjct: 172 RGSQQYRALTVPELT 186
Score = 65.7 bits (153), Expect = 1e-12
Identities = 27/66 (40%), Positives = 45/66 (68%)
Frame = +3
Query: 54 LLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 233
LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YD
Sbjct: 46 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYD 105
Query: 234 ICRRNL 251
IC R L
Sbjct: 106 ICFRTL 111
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 67.7 bits (158), Expect = 3e-13
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
++ P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 171
Query: 431 AEKAYHEQLSVAEIT 475
+ L+V E+T
Sbjct: 172 RGSQQYRALTVPELT 186
Score = 65.7 bits (153), Expect = 1e-12
Identities = 27/66 (40%), Positives = 45/66 (68%)
Frame = +3
Query: 54 LLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 233
LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YD
Sbjct: 46 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYD 105
Query: 234 ICRRNL 251
IC R L
Sbjct: 106 ICFRTL 111
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 67.7 bits (158), Expect = 3e-13
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
++ P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 171
Query: 431 AEKAYHEQLSVAEIT 475
+ L+V E+T
Sbjct: 172 RGSQQYRALTVPELT 186
Score = 65.7 bits (153), Expect = 1e-12
Identities = 27/66 (40%), Positives = 45/66 (68%)
Frame = +3
Query: 54 LLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 233
LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YD
Sbjct: 46 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYD 105
Query: 234 ICRRNL 251
IC R L
Sbjct: 106 ICFRTL 111
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 67.7 bits (158), Expect = 3e-13
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
++ P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 112 KVPNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 171
Query: 431 AEKAYHEQLSVAEIT 475
+ L+V E+T
Sbjct: 172 RGSQQYRALTVPELT 186
Score = 65.7 bits (153), Expect = 1e-12
Identities = 27/66 (40%), Positives = 45/66 (68%)
Frame = +3
Query: 54 LLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 233
LL+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YD
Sbjct: 46 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYD 105
Query: 234 ICRRNL 251
IC R L
Sbjct: 106 ICFRTL 111
>AJ304410-1|CAC67443.1| 190|Anopheles gambiae calpain protein.
Length = 190
Score = 23.8 bits (49), Expect = 5.6
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 610 PIARLSHPWGND 575
P+ RL +PWGN+
Sbjct: 4 PLIRLRNPWGNE 15
>DQ383819-1|ABD38144.1| 377|Anopheles gambiae abdominal-B protein.
Length = 377
Score = 23.4 bits (48), Expect = 7.4
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 601 RLSHPWGNDVTTVTAY 554
R S+PWGND AY
Sbjct: 145 RHSYPWGNDSAADYAY 160
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 23.4 bits (48), Expect = 7.4
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +1
Query: 466 RDHKRMLSSPGQTRCEMR 519
R H+R+L++PG +R ++R
Sbjct: 855 RCHRRLLAAPGASRKDIR 872
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.0 bits (47), Expect = 9.8
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 610 PIARLSHPWGNDVTTVTA-YRQAHVLAH*PGVAFHIW 503
P R S P T + A R+AHVL G FH W
Sbjct: 1143 PTFRPSGPAMGPRTAMAAGTRRAHVLQRSAGKMFHQW 1179
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 862,545
Number of Sequences: 2352
Number of extensions: 21439
Number of successful extensions: 71
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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