Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30933
(739 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 164 5e-41
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 164 5e-41
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 164 5e-41
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 164 5e-41
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 161 4e-40
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 161 4e-40
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 150 1e-36
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 77 2e-14
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 76 2e-14
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 74 9e-14
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 74 9e-14
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 73 2e-13
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 73 2e-13
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 73 2e-13
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 73 2e-13
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 73 2e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 52 5e-07
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 52 5e-07
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.037
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy... 31 0.80
At3g60320.1 68416.m06742 expressed protein contains Pfam profile... 28 7.4
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 28 7.4
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 27 9.8
At1g67810.1 68414.m07740 Fe-S metabolism associated domain-conta... 27 9.8
At1g48880.1 68414.m05476 hypothetical protein 27 9.8
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 164 bits (399), Expect = 5e-41
Identities = 93/159 (58%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
EKA+HEQLSVAEITN+ F PA KCDPR GKYM CC RGDVV + A
Sbjct: 279 EKAFHEQLSVAEITNSAFE-PASMMAKCDPRH-GKYM---ACCLMYRGDVVPKDVNAAVG 333
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ +K FV W GF+ + P P G
Sbjct: 334 TIKTKRT----IQFV--DWCPTGFKCGINYQPPTVVPGG 366
Score = 120 bits (288), Expect = 1e-27
Identities = 55/92 (59%), Positives = 72/92 (78%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
LEH+D + ++DNEAIYDICRR+L++ +PT T
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLNIE-RPTYT 225
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 164 bits (399), Expect = 5e-41
Identities = 93/159 (58%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
EKA+HEQLSVAEITN+ F PA KCDPR GKYM CC RGDVV + A
Sbjct: 279 EKAFHEQLSVAEITNSAFE-PASMMAKCDPRH-GKYM---ACCLMYRGDVVPKDVNAAVG 333
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ +K FV W GF+ + P P G
Sbjct: 334 TIKTKRT----IQFV--DWCPTGFKCGINYQPPTVVPGG 366
Score = 120 bits (288), Expect = 1e-27
Identities = 55/92 (59%), Positives = 72/92 (78%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
LEH+D + ++DNEAIYDICRR+L++ +PT T
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLNIE-RPTYT 225
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 164 bits (399), Expect = 5e-41
Identities = 93/159 (58%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
EKA+HEQLSVAEITN+ F PA KCDPR GKYM CC RGDVV + A
Sbjct: 279 EKAFHEQLSVAEITNSAFE-PASMMAKCDPRH-GKYM---ACCLMYRGDVVPKDVNAAVG 333
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ +K FV W GF+ + P P G
Sbjct: 334 TIKTKRT----IQFV--DWCPTGFKCGINYQPPTVVPGG 366
Score = 119 bits (287), Expect = 2e-27
Identities = 55/92 (59%), Positives = 71/92 (77%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
LEH+D + ++DNEAIYDICRR+L + +PT T
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLSIE-RPTYT 225
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 164 bits (399), Expect = 5e-41
Identities = 93/159 (58%), Positives = 107/159 (67%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
EKA+HEQLSVAEITN+ F PA KCDPR GKYM CC RGDVV + A
Sbjct: 279 EKAFHEQLSVAEITNSAFE-PASMMAKCDPRH-GKYM---ACCLMYRGDVVPKDVNAAVG 333
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ +K FV W GF+ + P P G
Sbjct: 334 TIKTKRT----IQFV--DWCPTGFKCGINYQPPTVVPGG 366
Score = 119 bits (287), Expect = 2e-27
Identities = 55/92 (59%), Positives = 71/92 (77%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
LEH+D + ++DNEAIYDICRR+L + +PT T
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLSIE-RPTYT 225
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 161 bits (391), Expect = 4e-40
Identities = 93/159 (58%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
KAYHEQLSV EITNA F PA KCDPR GKYM CC RGDVV + A
Sbjct: 279 AKAYHEQLSVPEITNAVFE-PASMMAKCDPRH-GKYM---ACCLMYRGDVVPKDVNAAVG 333
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ +K FV W GF+ + P P G
Sbjct: 334 TIKTKRT----VQFV--DWCPTGFKCGINYQPPTVVPGG 366
Score = 124 bits (299), Expect = 6e-29
Identities = 59/92 (64%), Positives = 72/92 (78%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
LEH+D A ++DNEAIYDICRR+LD+ +PT T
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIE-RPTYT 225
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 161 bits (391), Expect = 4e-40
Identities = 93/159 (58%), Positives = 104/159 (65%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
KAYHEQLSV EITNA F PA KCDPR GKYM CC RGDVV + A
Sbjct: 279 AKAYHEQLSVPEITNAVFE-PASMMAKCDPRH-GKYM---ACCLMYRGDVVPKDVNAAVG 333
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ +K FV W GF+ + P P G
Sbjct: 334 TIKTKRT----VQFV--DWCPTGFKCGINYQPPTVVPGG 366
Score = 124 bits (299), Expect = 6e-29
Identities = 59/92 (64%), Positives = 72/92 (78%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPTPT 278
LEH+D A ++DNEAIYDICRR+LD+ +PT T
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIE-RPTYT 225
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 150 bits (363), Expect = 1e-36
Identities = 86/159 (54%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
+ERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS+
Sbjct: 219 IERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISS 278
Query: 434 EKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCC--NRGDVVTPRM*KAGN 607
KAYHEQ SV EIT + F P+ KCDPR GKYM CC RGDVV K N
Sbjct: 279 AKAYHEQFSVPEITTSVFE-PSNMMAKCDPRH-GKYM---ACCLMYRGDVVP----KDVN 329
Query: 608 RLTSKNQSGNYSNFVGTGWSKPGFQSSVFN*PRPTQPVG 724
+ ++ FV W GF+ + P P G
Sbjct: 330 TAVAAIKAKRTIQFV--DWCPTGFKCGINYQPPSVVPGG 366
Score = 120 bits (289), Expect = 1e-27
Identities = 56/90 (62%), Positives = 70/90 (77%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
FL+F+ LL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+
Sbjct: 135 FLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSL 194
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPT 272
LEH+D ++DNEAIYDICRR+LD+ +PT
Sbjct: 195 LEHTDVVVLLDNEAIYDICRRSLDIE-RPT 223
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 76.6 bits (180), Expect = 2e-14
Identities = 45/127 (35%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ LSV E+T + A DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYSALSVPELTQQMWDA-KNMMCAADPRH-GRYLTASAVF-RGKLSTKEVDEQMMN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 IQNKNSS 339
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/90 (37%), Positives = 54/90 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPT 272
+E++D ++DNEA+YDIC R L L A PT
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL-ANPT 221
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 76.2 bits (179), Expect = 2e-14
Identities = 45/127 (35%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ LSV E+T + A DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYSALSVPELTQQMWDA-KNMMCAADPRH-GRYLTASAVF-RGKMSTKEVDEQMMN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/90 (37%), Positives = 54/90 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLSAQPT 272
+E++D ++DNEA+YDIC R L L A PT
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL-ANPT 221
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/86 (38%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 134 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 193
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L LS
Sbjct: 194 VENADECMVLDNEALYDICFRTLKLS 219
Score = 73.7 bits (173), Expect = 1e-13
Identities = 44/127 (34%), Positives = 68/127 (53%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 KLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 276
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 277 RGSQQYISLTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQILN 333
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 334 VQNKNSS 340
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/86 (38%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 134 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 193
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L LS
Sbjct: 194 VENADECMVLDNEALYDICFRTLKLS 219
Score = 73.3 bits (172), Expect = 2e-13
Identities = 43/127 (33%), Positives = 68/127 (53%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T SLRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 KLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 276
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + + DPR G+Y+ RG + T + +
Sbjct: 277 RGSQQYISLTVPELTQQMWDS-KNMMCAADPRH-GRYLTASAIF-RGQMSTKEVDEQILN 333
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 334 IQNKNSS 340
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 73.3 bits (172), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L LS
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLS 218
Score = 73.3 bits (172), Expect = 2e-13
Identities = 43/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRNLTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMLN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L L+
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLT 218
Score = 71.7 bits (168), Expect = 5e-13
Identities = 42/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + + DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRSLTVPELTQQMWDS-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMLN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L L+
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLT 218
Score = 71.7 bits (168), Expect = 5e-13
Identities = 42/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + + DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRSLTVPELTQQMWDS-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMLN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L L+
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLT 218
Score = 72.5 bits (170), Expect = 3e-13
Identities = 43/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + A DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRALTVPELTQQMWDA-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMIN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTT 182
F + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQL 192
Query: 183 LEHSDCAFMVDNEAIYDICRRNLDLS 260
+E++D ++DNEA+YDIC R L L+
Sbjct: 193 VENADECMVLDNEALYDICFRTLKLT 218
Score = 71.3 bits (167), Expect = 6e-13
Identities = 42/127 (33%), Positives = 67/127 (52%)
Frame = +2
Query: 251 RLERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVIS 430
+L P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 216 KLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS 275
Query: 431 AEKAYHEQLSVAEITNACFRAPAKPDVKCDPRSMGKYMGLPVCCNRGDVVTPRM*KAGNR 610
+ L+V E+T + + DPR G+Y+ RG + T + +
Sbjct: 276 RGSQQYRALTVPELTQQMWDS-KNMMCAADPRH-GRYLTASAMF-RGKMSTKEVDEQMIN 332
Query: 611 LTSKNQS 631
+ +KN S
Sbjct: 333 VQNKNSS 339
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
L PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 220 LTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVE 279
Query: 434 EKA 442
+A
Sbjct: 280 RQA 282
Score = 47.6 bits (108), Expect = 9e-06
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHT 179
F++ H L+E L+ Y KK ++++P + S VV+PYNS+LT
Sbjct: 135 FVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKR 194
Query: 180 TLEHSDCAFMVDNEAIYDICRRNLDLSAQPT 272
++DC ++DN A+ I L L+ PT
Sbjct: 195 LTLNADCVVVLDNTALNRIAVERLHLT-NPT 224
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 254 LERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 433
L PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+
Sbjct: 220 LTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVE 279
Query: 434 EKA 442
+A
Sbjct: 280 RQA 282
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 FLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHT 179
F++ H L+E L+ Y KK ++++P + S VV+PYNS+LT
Sbjct: 135 FVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKR 194
Query: 180 TLEHSDCAFMVDNEAIYDICRRNLDLSAQPT 272
++DC ++DN A+ I L L+ PT
Sbjct: 195 LTLNADCVVVLDNTALGRIAVERLHLT-NPT 224
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 307 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 441
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
cytochrome P450 SP:O48927 from [Glycine max]
Length = 535
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 341 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 481
+++D NL+P PR FPLV + S+ A+ SVAE++NA
Sbjct: 62 ISLDYNRKYKNLIPGPR-GFPLVGSMSLRSSHVAHQRIASVAEMSNA 107
>At3g60320.1 68416.m06742 expressed protein contains Pfam profiles:
PF04782: protein of unknown function (DUF632), PF04783:
protein of unknown function (DUF630)
Length = 796
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Frame = +3
Query: 351 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTM--NSFP--SPRSQTHAFEPR------P 500
TSPS + + +STS R +Q PR P + S P SPRS+ F P
Sbjct: 106 TSPSVASSKQPSVMSTSSNRRRKQQPKPRLPHILSESSPSSSPRSERSNFMPNLYPSAYQ 165
Query: 501 NQM*NATPGQWASTW 545
N +ATP +S W
Sbjct: 166 NSTYSATPSHASSVW 180
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -3
Query: 260 AQVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 123
+ VEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 229 SNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 215 VDHESTVRVLKGCVGGEDRVVGLDDGSGNLRRGVDG 108
+ H STVR K VGG +++ G +L G DG
Sbjct: 394 ISHISTVRTEKDSVGGLNQMEDASRGKLSLIEGADG 429
>At1g67810.1 68414.m07740 Fe-S metabolism associated
domain-containing protein contains Pfam PF02657: Fe-S
metabolism associated domain
Length = 258
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 438 RPTMNSFPSPRSQTHAFEPRP 500
RPT SFP+PR T F P+P
Sbjct: 20 RPTTKSFPNPRF-TSRFSPKP 39
>At1g48880.1 68414.m05476 hypothetical protein
Length = 485
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 411 RTRQSSLPRRPTMNSFPSPRSQTHAFEPRPN 503
R SS+ P ++F SPRSQ PRP+
Sbjct: 24 RNSSSSVFTSPIGSAFASPRSQNFGGSPRPS 54
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,202,670
Number of Sequences: 28952
Number of extensions: 428110
Number of successful extensions: 1154
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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