Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30932
         (776 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007860-1|AAH07860.1|  198|Homo sapiens DENR protein protein.         70   8e-12
AF038554-1|AAC02985.2|  243|Homo sapiens density regulated prote...    70   8e-12
AB014731-1|BAB20268.1|  198|Homo sapiens SMAP-3 protein.               70   8e-12
AF103800-1|AAF02420.1|  150|Homo sapiens unknown protein.              69   2e-11

>BC007860-1|AAH07860.1|  198|Homo sapiens DENR protein protein.
          Length = 198

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +2

Query: 140 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTESRK 262
           YP++V YCG CS+P EYCEY P+  KC+QWLEKN P E  K
Sbjct: 27  YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAK 67



 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = +1

Query: 346 KKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVT 507
           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +FF  KF+CG+SVT
Sbjct: 106 QKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVT 159



 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +3

Query: 510 DDEIVIQGDVKDDLFDIIPEKWPEIDEDSIEDLGDPKR 623
           +DEI+IQGD  DD+ D+I EKWPE+D+DSIEDLG+ K+
Sbjct: 161 EDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198


>AF038554-1|AAC02985.2|  243|Homo sapiens density regulated protein
           drp1 protein.
          Length = 243

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +2

Query: 140 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTESRK 262
           YP++V YCG CS+P EYCEY P+  KC+QWLEKN P E  K
Sbjct: 72  YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAK 112



 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = +1

Query: 346 KKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVT 507
           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +FF  KF+CG+SVT
Sbjct: 151 QKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVT 204



 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +3

Query: 510 DDEIVIQGDVKDDLFDIIPEKWPEIDEDSIEDLGDPKR 623
           +DEI+IQGD  DD+ D+I EKWPE+D+DSIEDLG+ K+
Sbjct: 206 EDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 243


>AB014731-1|BAB20268.1|  198|Homo sapiens SMAP-3 protein.
          Length = 198

 Score = 70.1 bits (164), Expect = 8e-12
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +2

Query: 140 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTESRK 262
           YP++V YCG CS+P EYCEY P+  KC+QWLEKN P E  K
Sbjct: 27  YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAK 67



 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = +1

Query: 346 KKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVT 507
           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +FF  KF+CG+SVT
Sbjct: 106 QKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVT 159



 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +3

Query: 510 DDEIVIQGDVKDDLFDIIPEKWPEIDEDSIEDLGDPKR 623
           +DEI+IQGD  DD+ D+I EKWPE+D+DSIEDLG+ K+
Sbjct: 161 EDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198


>AF103800-1|AAF02420.1|  150|Homo sapiens unknown protein.
          Length = 150

 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = +1

Query: 346 KKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVT 507
           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +FF  KF+CG+SVT
Sbjct: 58  QKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVT 111



 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +3

Query: 510 DDEIVIQGDVKDDLFDIIPEKWPEIDEDSIEDLGDPKR 623
           +DEI+IQGD  DD+ D+I EKWPE+D+DSIEDLG+ K+
Sbjct: 113 EDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 150



 Score = 30.7 bits (66), Expect = 6.1
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 215 KCKQWLEKNLPTESRK 262
           KC+QWLEKN P E  K
Sbjct: 4   KCRQWLEKNFPNEFAK 19


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,250,715
Number of Sequences: 237096
Number of extensions: 1773601
Number of successful extensions: 3252
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3252
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)