Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30929
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.6  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 273 TESTGISFPSC 241
           TE+TG+S P+C
Sbjct: 43  TEATGLSLPAC 53


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = -1

Query: 624 FTFERRHTCHYIASCWIPFDTRHLIMISHIH 532
           FT    +    +   W      HL+ IS IH
Sbjct: 183 FTILNNYLTIVLGETWTSLSVYHLVEISEIH 213


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/31 (29%), Positives = 12/31 (38%)
 Frame = -1

Query: 624 FTFERRHTCHYIASCWIPFDTRHLIMISHIH 532
           FT    +    +   W      HL+ IS IH
Sbjct: 179 FTILNNYLTIVLGETWTSLSVYHLVEISEIH 209


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 102 TSSWNELQYDW 70
           T SW EL +DW
Sbjct: 325 TVSWCELNFDW 335


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -3

Query: 394 CLASIYLIEADT-DVCWVTVNNREL*TNWLPSKSLNRFLDLDG 269
           C +S +    D  +VC+   NN  L  N+  S   NR  ++DG
Sbjct: 389 CRSSTFRNNRDEYNVCFRPRNNSILIKNFNDSPESNRSNEIDG 431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,483
Number of Sequences: 336
Number of extensions: 4366
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)