Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30929
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation in... 109 1e-23
U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein. 109 1e-23
BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation ... 109 1e-23
BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein. 109 1e-23
AB209381-1|BAD92618.1| 170|Homo sapiens eukaryotic translation ... 109 1e-23
BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for IM... 103 6e-22
AK126670-1|BAC86636.1| 152|Homo sapiens protein ( Homo sapiens ... 66 1e-10
U09278-1|AAB49652.1| 760|Homo sapiens fibroblast activation pro... 33 1.0
BC011885-1|AAH11885.1| 585|Homo sapiens eukaryotic translation ... 33 1.4
AK027356-1|BAB55058.1| 585|Homo sapiens protein ( Homo sapiens ... 33 1.4
AF212241-1|AAK14926.1| 609|Homo sapiens CDA02 protein. 33 1.4
AF109358-1|AAQ13506.1| 317|Homo sapiens MSTP004 protein. 33 1.4
Y10183-1|CAA71256.1| 582|Homo sapiens MEMD protein protein. 32 1.8
DQ486140-1|ABF48406.1| 583|Homo sapiens activated leukocyte cel... 32 1.8
DQ486139-1|ABF48405.1| 570|Homo sapiens activated leukocyte cel... 32 1.8
L38608-1|AAB59499.1| 583|Homo sapiens alcam protein. 32 2.4
EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein. 31 3.1
EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related... 31 3.1
EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related... 31 3.1
BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein. 31 3.1
BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein. 31 3.1
AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein. 31 3.1
AK123876-1|BAC85713.1| 428|Homo sapiens protein ( Homo sapiens ... 31 3.1
AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens ... 31 3.1
AK026330-1|BAB15448.1| 173|Homo sapiens protein ( Homo sapiens ... 31 3.1
AF497978-1|AAM83402.1| 585|Homo sapiens eukaryotic translation ... 31 3.1
AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein. 31 3.1
>U78525-1|AAC99479.1| 814|Homo sapiens eukaryotic translation
initiation factor protein.
Length = 814
Score = 109 bits (262), Expect = 1e-23
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +3
Query: 9 LAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKK 188
+A+WV EDKD+PARVTL+++P R E+R +NLF+V DCK+HWQK+GDYLCVKVDR K +
Sbjct: 479 IAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ 538
Query: 189 DKIDIKYSGMYYNFEIFHMREKK 257
G+ NFEIF MREK+
Sbjct: 539 --------GVVTNFEIFRMREKQ 553
Score = 103 bits (247), Expect = 6e-22
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +2
Query: 251 KEIPVDSVEIKEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPF 430
K++PVD VE+KE I AFAWEP GSKF+++HG+ IS+SFY V L+K F+++
Sbjct: 552 KQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQA 611
Query: 431 NHLFWSPSGQFIVLANLGLTGGALEF 508
N +FWSP GQF+VLA L GAL F
Sbjct: 612 NTIFWSPQGQFVVLAGLRSMNGALAF 637
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 499 IGVLDTNDFTIMNVADHYQMSGIEWDPTGRYVVTGVSSLKCKMGLRAINIWSFPGARILQ 678
+ +DT+D T+MN+A+HY S +EWDPTGRYVVT VS K+ A +W+F G R+LQ
Sbjct: 635 LAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVD-NAYWLWTFQG-RLLQ 692
>U62583-1|AAB42010.1| 873|Homo sapiens Prt1 homolog protein.
Length = 873
Score = 109 bits (262), Expect = 1e-23
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +3
Query: 9 LAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKK 188
+A+WV EDKD+PARVTL+++P R E+R +NLF+V DCK+HWQK+GDYLCVKVDR K +
Sbjct: 479 IAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ 538
Query: 189 DKIDIKYSGMYYNFEIFHMREKK 257
G+ NFEIF MREK+
Sbjct: 539 --------GVVTNFEIFRMREKQ 553
Score = 103 bits (247), Expect = 6e-22
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +2
Query: 251 KEIPVDSVEIKEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPF 430
K++PVD VE+KE I AFAWEP GSKF+++HG+ IS+SFY V L+K F+++
Sbjct: 552 KQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQA 611
Query: 431 NHLFWSPSGQFIVLANLGLTGGALEF 508
N +FWSP GQF+VLA L GAL F
Sbjct: 612 NTIFWSPQGQFVVLAGLRSMNGALAF 637
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 499 IGVLDTNDFTIMNVADHYQMSGIEWDPTGRYVVTGVSSLKCKMGLRAINIWSFPGARILQ 678
+ +DT+D T+MN+A+HY S +EWDPTGRYVVT VS K+ A +W+F G R+LQ
Sbjct: 635 LAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVD-NAYWLWTFQG-RLLQ 692
>BC110865-1|AAI10866.1| 814|Homo sapiens eukaryotic translation
initiation factor 3, subunit B protein.
Length = 814
Score = 109 bits (262), Expect = 1e-23
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +3
Query: 9 LAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKK 188
+A+WV EDKD+PARVTL+++P R E+R +NLF+V DCK+HWQK+GDYLCVKVDR K +
Sbjct: 479 IAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ 538
Query: 189 DKIDIKYSGMYYNFEIFHMREKK 257
G+ NFEIF MREK+
Sbjct: 539 --------GVVTNFEIFRMREKQ 553
Score = 103 bits (247), Expect = 6e-22
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +2
Query: 251 KEIPVDSVEIKEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPF 430
K++PVD VE+KE I AFAWEP GSKF+++HG+ IS+SFY V L+K F+++
Sbjct: 552 KQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQA 611
Query: 431 NHLFWSPSGQFIVLANLGLTGGALEF 508
N +FWSP GQF+VLA L GAL F
Sbjct: 612 NTIFWSPQGQFVVLAGLRSMNGALAF 637
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 499 IGVLDTNDFTIMNVADHYQMSGIEWDPTGRYVVTGVSSLKCKMGLRAINIWSFPGARILQ 678
+ +DT+D T+MN+A+HY S +EWDPTGRYVVT VS K+ A +W+F G R+LQ
Sbjct: 635 LAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVD-NAYWLWTFQG-RLLQ 692
>BC001173-1|AAH01173.1| 814|Homo sapiens EIF3S9 protein protein.
Length = 814
Score = 109 bits (262), Expect = 1e-23
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +3
Query: 9 LAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKK 188
+A+WV EDKD+PARVTL+++P R E+R +NLF+V DCK+HWQK+GDYLCVKVDR K +
Sbjct: 479 IAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ 538
Query: 189 DKIDIKYSGMYYNFEIFHMREKK 257
G+ NFEIF MREK+
Sbjct: 539 --------GVVTNFEIFRMREKQ 553
Score = 103 bits (247), Expect = 6e-22
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +2
Query: 251 KEIPVDSVEIKEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPF 430
K++PVD VE+KE I AFAWEP GSKF+++HG+ IS+SFY V L+K F+++
Sbjct: 552 KQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQA 611
Query: 431 NHLFWSPSGQFIVLANLGLTGGALEF 508
N +FWSP GQF+VLA L GAL F
Sbjct: 612 NTIFWSPQGQFVVLAGLRSMNGALAF 637
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 499 IGVLDTNDFTIMNVADHYQMSGIEWDPTGRYVVTGVSSLKCKMGLRAINIWSFPGARILQ 678
+ +DT+D T+MN+A+HY S +EWDPTGRYVVT VS K+ A +W+F G R+LQ
Sbjct: 635 LAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVD-NAYWLWTFQG-RLLQ 692
>AB209381-1|BAD92618.1| 170|Homo sapiens eukaryotic translation
initiation factor 3, subunit 9 eta, 116kDa isoform b var
protein.
Length = 170
Score = 109 bits (262), Expect = 1e-23
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +3
Query: 9 LAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKK 188
+A+WV EDKD+PARVTL+++P R E+R +NLF+V DCK+HWQK+GDYLCVKVDR K +
Sbjct: 19 IAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ 78
Query: 189 DKIDIKYSGMYYNFEIFHMREKK 257
G+ NFEIF MREK+
Sbjct: 79 --------GVVTNFEIFRMREKQ 93
Score = 97.9 bits (233), Expect = 3e-20
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +2
Query: 251 KEIPVDSVEIKEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPF 430
K++PVD VE+KE I AFAWEP GSKF+++HG+ IS+SFY V L+K F+++
Sbjct: 92 KQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQA 151
Query: 431 NHLFWSPSGQFIVLANL 481
N +FWSP GQF+VLA L
Sbjct: 152 NTIFWSPQGQFVVLAGL 168
>BC009986-1|AAH09986.1| 622|Homo sapiens Unknown (protein for
IMAGE:4124553) protein.
Length = 622
Score = 103 bits (247), Expect = 6e-22
Identities = 46/86 (53%), Positives = 60/86 (69%)
Frame = +2
Query: 251 KEIPVDSVEIKEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPF 430
K++PVD VE+KE I AFAWEP GSKF+++HG+ IS+SFY V L+K F+++
Sbjct: 360 KQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQA 419
Query: 431 NHLFWSPSGQFIVLANLGLTGGALEF 508
N +FWSP GQF+VLA L GAL F
Sbjct: 420 NTIFWSPQGQFVVLAGLRSMNGALAF 445
Score = 100 bits (240), Expect = 5e-21
Identities = 48/83 (57%), Positives = 61/83 (73%)
Frame = +3
Query: 9 LAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKK 188
+A+WV EDKD+PARVTL+ +P R E+R +NLF+V DCK+HWQK+GDYLCVKV R K +
Sbjct: 288 IAFWVPEDKDIPARVTLM-LPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVYRTPKGTQ 346
Query: 189 DKIDIKYSGMYYNFEIFHMREKK 257
G+ NFEIF MREK+
Sbjct: 347 --------GVVTNFEIFRMREKQ 361
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 499 IGVLDTNDFTIMNVADHYQMSGIEWDPTGRYVVTGVSSLKCKMGLRAINIWSFPGARILQ 678
+ +DT+D T+MN+A+HY S +EWDPTGRYVVT VS K+ A +W+F G R+LQ
Sbjct: 443 LAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVD-NAYWLWTFQG-RLLQ 500
>AK126670-1|BAC86636.1| 152|Homo sapiens protein ( Homo sapiens
cDNA FLJ44714 fis, clone BRACE3020669, highly similar
to Eukaryotic translation initiation factor 3 subunit 9.
).
Length = 152
Score = 66.1 bits (154), Expect = 1e-10
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 499 IGVLDTNDFTIMNVADHYQMSGIEWDPTGRYVVTGVSSLKCKMGLRAINIWSFPGARILQ 678
+ +DT+D T+MN+A+HY S +EWDPTGRYVVT VS K+ A +W+F G R+LQ
Sbjct: 32 LAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVD-NAYWLWTFQG-RLLQ 89
>U09278-1|AAB49652.1| 760|Homo sapiens fibroblast activation
protein protein.
Length = 760
Score = 33.1 bits (72), Expect = 1.0
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 15/82 (18%)
Frame = +2
Query: 275 EIKEPIQAFAWEPVGSKFSIIH----------GDPANISISF----YQVNTGQAPTLLKK 412
E+ PIQ W PVGSK + ++ GDP I+F ++ G P + +
Sbjct: 145 ELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPP-FQITFNGRENKIFNG-IPDWVYE 202
Query: 413 FERKPFNH-LFWSPSGQFIVLA 475
E P + L+WSP+G+F+ A
Sbjct: 203 EEMLPTKYALWWSPNGKFLAYA 224
>BC011885-1|AAH11885.1| 585|Homo sapiens eukaryotic translation
initiation factor 2A, 65kDa protein.
Length = 585
Score = 32.7 bits (71), Expect = 1.4
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 PIQAFAWEPVGSKFSIIHGD-PANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQF 463
PI W ++F ++G PA +I N P F P N ++SP G
Sbjct: 275 PIYDVVWNSSSTEFCAVYGFMPAKATI----FNLKCDPVF--DFGTGPRNAAYYSPHGHI 328
Query: 464 IVLANLGLTGGALEFW 511
+VLA G G +E W
Sbjct: 329 LVLAGFGNLRGQMEVW 344
>AK027356-1|BAB55058.1| 585|Homo sapiens protein ( Homo sapiens
cDNA FLJ14450 fis, clone HEMBB1001736, weakly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 9. ).
Length = 585
Score = 32.7 bits (71), Expect = 1.4
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 PIQAFAWEPVGSKFSIIHGD-PANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQF 463
PI W ++F ++G PA +I N P F P N ++SP G
Sbjct: 275 PIYDVVWNSSSTEFCAVYGFMPAKATI----FNLKCDPVF--DFGTGPRNAAYYSPHGHI 328
Query: 464 IVLANLGLTGGALEFW 511
+VLA G G +E W
Sbjct: 329 LVLAGFGNLRGQMEVW 344
>AF212241-1|AAK14926.1| 609|Homo sapiens CDA02 protein.
Length = 609
Score = 32.7 bits (71), Expect = 1.4
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 PIQAFAWEPVGSKFSIIHGD-PANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQF 463
PI W ++F ++G PA +I N P F P N ++SP G
Sbjct: 299 PIYDVVWNSSSTEFCAVYGFMPAKATI----FNLKCDPVF--DFGTGPRNAAYYSPHGHI 352
Query: 464 IVLANLGLTGGALEFW 511
+VLA G G +E W
Sbjct: 353 LVLAGFGNLRGQMEVW 368
>AF109358-1|AAQ13506.1| 317|Homo sapiens MSTP004 protein.
Length = 317
Score = 32.7 bits (71), Expect = 1.4
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 PIQAFAWEPVGSKFSIIHGD-PANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQF 463
PI W ++F ++G PA +I N P F P N ++SP G
Sbjct: 61 PIYDVVWNSSSTEFCAVYGFMPAKATI----FNLKCDPVF--DFGTGPRNAAYYSPHGHI 114
Query: 464 IVLANLGLTGGALEFW 511
+VLA G G +E W
Sbjct: 115 LVLAGFGNLRGQMEVW 130
>Y10183-1|CAA71256.1| 582|Homo sapiens MEMD protein protein.
Length = 582
Score = 32.3 bits (70), Expect = 1.8
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 42 PARVTLLEIPNRTE-VRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKKDKIDIKYSGM 218
P L +P + E +RS N +++ D + +GDY C +D+ S + I + Y +
Sbjct: 276 PPEEFLFYLPGQPEGIRSSNTYTLTD--VRRNATGDYKCSLIDKKSMIASTAITVHYLDL 333
Query: 219 YYN 227
N
Sbjct: 334 SLN 336
>DQ486140-1|ABF48406.1| 583|Homo sapiens activated leukocyte cell
adhesion molecule variant 2 protein.
Length = 583
Score = 32.3 bits (70), Expect = 1.8
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 42 PARVTLLEIPNRTE-VRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKKDKIDIKYSGM 218
P L +P + E +RS N +++ D + +GDY C +D+ S + I + Y +
Sbjct: 277 PPEEFLFYLPGQPEGIRSSNTYTLTD--VRRNATGDYKCSLIDKKSMIASTAITVHYLDL 334
Query: 219 YYN 227
N
Sbjct: 335 SLN 337
>DQ486139-1|ABF48405.1| 570|Homo sapiens activated leukocyte cell
adhesion molecule variant 1 protein.
Length = 570
Score = 32.3 bits (70), Expect = 1.8
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 42 PARVTLLEIPNRTE-VRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKKDKIDIKYSGM 218
P L +P + E +RS N +++ D + +GDY C +D+ S + I + Y +
Sbjct: 277 PPEEFLFYLPGQPEGIRSSNTYTLTD--VRRNATGDYKCSLIDKKSMIASTAITVHYLDL 334
Query: 219 YYN 227
N
Sbjct: 335 SLN 337
>L38608-1|AAB59499.1| 583|Homo sapiens alcam protein.
Length = 583
Score = 31.9 bits (69), Expect = 2.4
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 42 PARVTLLEIPNRTE-VRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKKDKIDIKYSGM 218
P L +P + E +RS N +++ D + +GDY C +D+ S + I + Y +
Sbjct: 277 PPEEFLFYLPGQPEGIRSSNTYTLMD--VRRNATGDYKCSLIDKKSMIASTAITVHYLDL 334
Query: 219 YYN 227
N
Sbjct: 335 SLN 337
>EF560734-1|ABQ59044.1| 588|Homo sapiens ATG16L1 protein protein.
Length = 588
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 528 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 579
>EF079890-1|ABN48555.1| 444|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 444
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 384 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 435
>EF079889-1|ABN48554.1| 588|Homo sapiens ATG16 autophagy related
16-like protein 1 protein.
Length = 588
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 528 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 579
>BC117337-1|AAI17338.1| 523|Homo sapiens ATG16L1 protein protein.
Length = 523
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 463 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 514
>BC071846-1|AAH71846.1| 475|Homo sapiens ATG16L1 protein protein.
Length = 475
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 415 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 466
>AY398617-1|AAR32130.1| 607|Homo sapiens APG16L beta protein.
Length = 607
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 547 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 598
>AK123876-1|BAC85713.1| 428|Homo sapiens protein ( Homo sapiens
cDNA FLJ41882 fis, clone OCBBF2022351, weakly similar
to TIPD PROTEIN. ).
Length = 428
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 368 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 419
>AK027854-1|BAB55412.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ14948 fis, clone PLACE2000164, weakly similar to
TIPD PROTEIN. ).
Length = 504
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 444 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 495
>AK026330-1|BAB15448.1| 173|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22677 fis, clone HSI10648. ).
Length = 173
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 113 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 164
>AF497978-1|AAM83402.1| 585|Homo sapiens eukaryotic translation
initiation factor 2A protein.
Length = 585
Score = 31.5 bits (68), Expect = 3.1
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 PIQAFAWEPVGSKFSIIHGD-PANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQF 463
PI W ++F + G PA +I N P F P N ++SP G
Sbjct: 275 PIYDVVWNSSSTEFCAVSGFMPAKATI----FNLKCDPVF--DFGTGPRNAAYYSPHGHI 328
Query: 464 IVLANLGLTGGALEFW 511
+VLA G G +E W
Sbjct: 329 LVLAGFGNLRGQMEVW 344
>AC013726-3|AAY14860.1| 523|Homo sapiens unknown protein.
Length = 523
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 329 SIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQFIVLANLG 484
S + A S+ + V TG+ +L K N + WSPSG +V + G
Sbjct: 463 SYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 514
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,276,846
Number of Sequences: 237096
Number of extensions: 2626227
Number of successful extensions: 9086
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9078
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -