BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30929 (720 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY122066-1|AAM52578.1| 690|Drosophila melanogaster AT09438p pro... 146 2e-35 AE013599-2499|AAG22261.1| 690|Drosophila melanogaster CG4878-PB... 146 2e-35 AE013599-2498|AAF57842.1| 690|Drosophila melanogaster CG4878-PA... 146 2e-35 AY061388-1|AAL28936.1| 335|Drosophila melanogaster LD31217p pro... 37 0.024 AE013599-1967|AAF58195.1| 335|Drosophila melanogaster CG12797-P... 37 0.024 BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p pro... 32 0.90 AY069414-1|AAL39559.1| 437|Drosophila melanogaster LD11036p pro... 32 0.90 AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-P... 32 0.90 AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein. 31 1.2 AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog... 30 2.8 BT025233-1|ABF17924.1| 818|Drosophila melanogaster FI01002p pro... 29 6.4 AY118369-1|AAM48398.1| 707|Drosophila melanogaster RE11711p pro... 29 6.4 AF289994-1|AAG02459.1| 818|Drosophila melanogaster thyroid horm... 29 6.4 AE013599-3354|AAF46815.2| 818|Drosophila melanogaster CG5465-PA... 29 6.4 >AY122066-1|AAM52578.1| 690|Drosophila melanogaster AT09438p protein. Length = 690 Score = 146 bits (355), Expect = 2e-35 Identities = 62/85 (72%), Positives = 75/85 (88%), Gaps = 2/85 (2%) Frame = +3 Query: 9 LAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKK 188 +AYWV E +PARVTL+EIP + E+R+KNLF VADCK+HWQKSGDYLCVKVDRYSK+KK Sbjct: 351 IAYWVEEQNQIPARVTLMEIPKKREIRNKNLFHVADCKLHWQKSGDYLCVKVDRYSKLKK 410 Query: 189 DK--IDIKYSGMYYNFEIFHMREKK 257 DK +D+K+ GM+YNFEIFHMREK+ Sbjct: 411 DKKDLDVKFLGMFYNFEIFHMREKE 435 Score = 119 bits (287), Expect = 3e-27 Identities = 56/86 (65%), Positives = 68/86 (79%) Frame = +2 Query: 251 KEIPVDSVEIKEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPF 430 KEIPVDSVEI+E I AFAWEPVG+KFSIIHG+ + ++SFY+VN G P+L+K+ E+K Sbjct: 434 KEIPVDSVEIRELILAFAWEPVGNKFSIIHGETNSSNVSFYEVNKGVKPSLVKRLEKKSC 493 Query: 431 NHLFWSPSGQFIVLANLGLTGGALEF 508 HLFWSP GQFIV+AN LT G EF Sbjct: 494 THLFWSPRGQFIVMAN--LTMGTFEF 517 Score = 58.8 bits (136), Expect = 7e-09 Identities = 29/55 (52%), Positives = 38/55 (69%) Frame = +1 Query: 514 TNDFTIMNVADHYQMSGIEWDPTGRYVVTGVSSLKCKMGLRAINIWSFPGARILQ 678 TND+ I DH++ S +EWDPTGRYVVTGVSS K K N+++F G RI++ Sbjct: 521 TNDYIITASPDHFRASEVEWDPTGRYVVTGVSSWKVKED-TGFNMYTFQG-RIIK 573 >AE013599-2499|AAG22261.1| 690|Drosophila melanogaster CG4878-PB, isoform B protein. Length = 690 Score = 146 bits (355), Expect = 2e-35 Identities = 62/85 (72%), Positives = 75/85 (88%), Gaps = 2/85 (2%) Frame = +3 Query: 9 LAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKK 188 +AYWV E +PARVTL+EIP + E+R+KNLF VADCK+HWQKSGDYLCVKVDRYSK+KK Sbjct: 351 IAYWVEEQNQIPARVTLMEIPKKREIRNKNLFHVADCKLHWQKSGDYLCVKVDRYSKLKK 410 Query: 189 DK--IDIKYSGMYYNFEIFHMREKK 257 DK +D+K+ GM+YNFEIFHMREK+ Sbjct: 411 DKKDLDVKFLGMFYNFEIFHMREKE 435 Score = 119 bits (287), Expect = 3e-27 Identities = 56/86 (65%), Positives = 68/86 (79%) Frame = +2 Query: 251 KEIPVDSVEIKEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPF 430 KEIPVDSVEI+E I AFAWEPVG+KFSIIHG+ + ++SFY+VN G P+L+K+ E+K Sbjct: 434 KEIPVDSVEIRELILAFAWEPVGNKFSIIHGETNSSNVSFYEVNKGVKPSLVKRLEKKSC 493 Query: 431 NHLFWSPSGQFIVLANLGLTGGALEF 508 HLFWSP GQFIV+AN LT G EF Sbjct: 494 THLFWSPRGQFIVMAN--LTMGTFEF 517 Score = 58.8 bits (136), Expect = 7e-09 Identities = 29/55 (52%), Positives = 38/55 (69%) Frame = +1 Query: 514 TNDFTIMNVADHYQMSGIEWDPTGRYVVTGVSSLKCKMGLRAINIWSFPGARILQ 678 TND+ I DH++ S +EWDPTGRYVVTGVSS K K N+++F G RI++ Sbjct: 521 TNDYIITASPDHFRASEVEWDPTGRYVVTGVSSWKVKED-TGFNMYTFQG-RIIK 573 >AE013599-2498|AAF57842.1| 690|Drosophila melanogaster CG4878-PA, isoform A protein. Length = 690 Score = 146 bits (355), Expect = 2e-35 Identities = 62/85 (72%), Positives = 75/85 (88%), Gaps = 2/85 (2%) Frame = +3 Query: 9 LAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKK 188 +AYWV E +PARVTL+EIP + E+R+KNLF VADCK+HWQKSGDYLCVKVDRYSK+KK Sbjct: 351 IAYWVEEQNQIPARVTLMEIPKKREIRNKNLFHVADCKLHWQKSGDYLCVKVDRYSKLKK 410 Query: 189 DK--IDIKYSGMYYNFEIFHMREKK 257 DK +D+K+ GM+YNFEIFHMREK+ Sbjct: 411 DKKDLDVKFLGMFYNFEIFHMREKE 435 Score = 119 bits (287), Expect = 3e-27 Identities = 56/86 (65%), Positives = 68/86 (79%) Frame = +2 Query: 251 KEIPVDSVEIKEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPF 430 KEIPVDSVEI+E I AFAWEPVG+KFSIIHG+ + ++SFY+VN G P+L+K+ E+K Sbjct: 434 KEIPVDSVEIRELILAFAWEPVGNKFSIIHGETNSSNVSFYEVNKGVKPSLVKRLEKKSC 493 Query: 431 NHLFWSPSGQFIVLANLGLTGGALEF 508 HLFWSP GQFIV+AN LT G EF Sbjct: 494 THLFWSPRGQFIVMAN--LTMGTFEF 517 Score = 58.8 bits (136), Expect = 7e-09 Identities = 29/55 (52%), Positives = 38/55 (69%) Frame = +1 Query: 514 TNDFTIMNVADHYQMSGIEWDPTGRYVVTGVSSLKCKMGLRAINIWSFPGARILQ 678 TND+ I DH++ S +EWDPTGRYVVTGVSS K K N+++F G RI++ Sbjct: 521 TNDYIITASPDHFRASEVEWDPTGRYVVTGVSSWKVKED-TGFNMYTFQG-RIIK 573 >AY061388-1|AAL28936.1| 335|Drosophila melanogaster LD31217p protein. Length = 335 Score = 37.1 bits (82), Expect = 0.024 Identities = 22/70 (31%), Positives = 31/70 (44%) Frame = +2 Query: 281 KEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQ 460 K I AW P G+ F+ D A I I NT T+L ++ + WSP GQ Sbjct: 14 KGRIWGVAWHPKGNVFASCGEDKA-IRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQ 72 Query: 461 FIVLANLGLT 490 ++ A+ T Sbjct: 73 YLASASFDAT 82 >AE013599-1967|AAF58195.1| 335|Drosophila melanogaster CG12797-PA protein. Length = 335 Score = 37.1 bits (82), Expect = 0.024 Identities = 22/70 (31%), Positives = 31/70 (44%) Frame = +2 Query: 281 KEPIQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFERKPFNHLFWSPSGQ 460 K I AW P G+ F+ D A I I NT T+L ++ + WSP GQ Sbjct: 14 KGRIWGVAWHPKGNVFASCGEDKA-IRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQ 72 Query: 461 FIVLANLGLT 490 ++ A+ T Sbjct: 73 YLASASFDAT 82 >BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p protein. Length = 1047 Score = 31.9 bits (69), Expect = 0.90 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +2 Query: 290 IQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFER----KPFNHLFWSPSG 457 ++ +W+P+G +F D +I I + +N + T+ + FE L WSP G Sbjct: 175 VKGVSWDPLG-RFLASQSDDRSIKI-WNTMNWSLSHTITEPFEECGGTTHILRLSWSPDG 232 Query: 458 QFIVLANLGLTGG 496 Q++V A+ + GG Sbjct: 233 QYLVSAH-AMNGG 244 >AY069414-1|AAL39559.1| 437|Drosophila melanogaster LD11036p protein. Length = 437 Score = 31.9 bits (69), Expect = 0.90 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +2 Query: 290 IQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFER----KPFNHLFWSPSG 457 ++ +W+P+G +F D +I I + +N + T+ + FE L WSP G Sbjct: 175 VKGVSWDPLG-RFLASQSDDRSIKI-WNTMNWSLSHTITEPFEECGGTTHILRLSWSPDG 232 Query: 458 QFIVLANLGLTGG 496 Q++V A+ + GG Sbjct: 233 QYLVSAH-AMNGG 244 >AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-PA protein. Length = 1047 Score = 31.9 bits (69), Expect = 0.90 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +2 Query: 290 IQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFER----KPFNHLFWSPSG 457 ++ +W+P+G +F D +I I + +N + T+ + FE L WSP G Sbjct: 175 VKGVSWDPLG-RFLASQSDDRSIKI-WNTMNWSLSHTITEPFEECGGTTHILRLSWSPDG 232 Query: 458 QFIVLANLGLTGG 496 Q++V A+ + GG Sbjct: 233 QYLVSAH-AMNGG 244 >AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein. Length = 1047 Score = 31.5 bits (68), Expect = 1.2 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +2 Query: 290 IQAFAWEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFER----KPFNHLFWSPSG 457 ++ +W+P+G +F D +I I + +N + T+ + FE L WSP G Sbjct: 175 VKGVSWDPLG-RFLASQSDDRSIKI-WNTMNWSLSHTITEPFEECGGTTHILRLSWSPDG 232 Query: 458 QFIVLANLGLTGG 496 Q++V A+ + GG Sbjct: 233 QYLVSAH-AMDGG 244 >AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog protein. Length = 1061 Score = 30.3 bits (65), Expect = 2.8 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = +2 Query: 305 WEPVGSKFSIIHGDPANISISFYQVNTGQAPTLLKKFER----KPFNHLFWSPSGQFIVL 472 W+P+G +F D +I I + +N + T+ + FE L WSP GQ++V Sbjct: 180 WDPLG-RFLASQSDDRSIKI-WNTMNWSLSHTITEPFEECGGTTHILRLSWSPDGQYLVS 237 Query: 473 ANLGLTGG 496 A+ + GG Sbjct: 238 AH-AMNGG 244 >BT025233-1|ABF17924.1| 818|Drosophila melanogaster FI01002p protein. Length = 818 Score = 29.1 bits (62), Expect = 6.4 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 Query: 437 LFWSPSGQFIVLANLGLTGGALEFWTQMTLPL*MWLI 547 L WSP+G+ ++L G GG +E W + +W++ Sbjct: 94 LQWSPNGEQLLL---GYVGGRVEIWQPRNQSINLWVL 127 >AY118369-1|AAM48398.1| 707|Drosophila melanogaster RE11711p protein. Length = 707 Score = 29.1 bits (62), Expect = 6.4 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 Query: 437 LFWSPSGQFIVLANLGLTGGALEFWTQMTLPL*MWLI 547 L WSP+G+ ++L G GG +E W + +W++ Sbjct: 94 LQWSPNGEQLLL---GYVGGRVEIWQPRNQSINLWVL 127 >AF289994-1|AAG02459.1| 818|Drosophila melanogaster thyroid hormone receptor-associatedprotein TRAP95 protein. Length = 818 Score = 29.1 bits (62), Expect = 6.4 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 Query: 437 LFWSPSGQFIVLANLGLTGGALEFWTQMTLPL*MWLI 547 L WSP+G+ ++L G GG +E W + +W++ Sbjct: 94 LQWSPNGEQLLL---GYVGGRVEIWQPRNQSINLWVL 127 >AE013599-3354|AAF46815.2| 818|Drosophila melanogaster CG5465-PA protein. Length = 818 Score = 29.1 bits (62), Expect = 6.4 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 Query: 437 LFWSPSGQFIVLANLGLTGGALEFWTQMTLPL*MWLI 547 L WSP+G+ ++L G GG +E W + +W++ Sbjct: 94 LQWSPNGEQLLL---GYVGGRVEIWQPRNQSINLWVL 127 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 34,333,607 Number of Sequences: 53049 Number of extensions: 776956 Number of successful extensions: 2358 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2239 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2351 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3211306956 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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