Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30927
         (753 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    77   2e-16
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    77   2e-16
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    70   2e-14
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.0  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   8.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.0  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 77.0 bits (181), Expect = 2e-16
 Identities = 41/82 (50%), Positives = 53/82 (64%)
 Frame = +2

Query: 383 INEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAK 562
           INEPTAAA+AYGLDK  + ERNVLIFDLGGGTFDVS+LTI+E      +    T     +
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHL-GGE 59

Query: 563 TLITD*FNHLAEEFKRKYKKDL 628
                   +  ++FK+K+K D+
Sbjct: 60  DFDNRLVEYCTQDFKKKHKADI 81


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 77.0 bits (181), Expect = 2e-16
 Identities = 41/82 (50%), Positives = 53/82 (64%)
 Frame = +2

Query: 383 INEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAK 562
           INEPTAAA+AYGLDK  + ERNVLIFDLGGGTFDVS+LTI+E      +    T     +
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHL-GGE 59

Query: 563 TLITD*FNHLAEEFKRKYKKDL 628
                   +  ++FK+K+K D+
Sbjct: 60  DFDNRLVEYCTQDFKKKHKADI 81


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 70.1 bits (164), Expect = 2e-14
 Identities = 39/85 (45%), Positives = 53/85 (62%)
 Frame = +2

Query: 383 INEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAK 562
           INEPTAAA+AYGLDK    E+N+L++DLGGGTFDVSILTID       +    T     +
Sbjct: 1   INEPTAAAIAYGLDKK-GAEQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHL-GGE 58

Query: 563 TLITD*FNHLAEEFKRKYKKDLRLE 637
                  ++  +  K+K+KKD+R +
Sbjct: 59  DFDQKVMDYFIKMVKQKHKKDIRAD 83


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/46 (23%), Positives = 17/46 (36%)
 Frame = -2

Query: 638 VQGADPSCTCA*TLPQDG*TSRLSKSSPPRCVSPAVDFTSNNDPRR 501
           V G  P   C+   P+     + SK  PP   +  +     N P +
Sbjct: 57  VTGTPPPLDCSKNSPEKESEEKKSKEKPPYSYNALIMMAIRNSPEK 102


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -3

Query: 310 CRNCDYRIPHCTS-QIGFRR 254
           CR+C Y   +C S +I  RR
Sbjct: 289 CRDCSYATKYCHSLKIHLRR 308


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -3

Query: 310 CRNCDYRIPHCTS-QIGFRR 254
           CR+C Y   +C S +I  RR
Sbjct: 47  CRDCSYATKYCHSLKIHLRR 66


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 338 TKDAGAIAGLNVLRIINEPTAA 403
           TKDAG ++   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 262 SLSGKYSAGCGSHSSGILQRLPASGHQGRRSHRRP 366
           SL  +YS   G H+    +R P +G +  ++ R P
Sbjct: 198 SLPRQYSQSRGRHNQSRSKRQPKTGRED-QTRRNP 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,608
Number of Sequences: 336
Number of extensions: 3342
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)