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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30927
         (753 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p...   159   5e-40
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ...   156   3e-39
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M...   133   2e-32
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc...   130   2e-31
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce...   128   8e-31
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch...    77   2e-15
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom...    62   8e-11
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe...    51   2e-07
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo...    30   0.41 
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces...    29   0.71 
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom...    28   1.6  
SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase Agn2|Schizo...    27   2.9  
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp...    27   2.9  
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p...    27   3.8  
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo...    26   6.6  
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe...    26   6.6  
SPBC215.03c |csn1||COP9/signalosome complex subunit Csn1|Schizos...    25   8.8  
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po...    25   8.8  
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S...    25   8.8  

>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 647

 Score =  159 bits (385), Expect = 5e-40
 Identities = 84/129 (65%), Positives = 95/129 (73%)
 Frame = +2

Query: 242 KNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 421
           K    AEAYLG  V DAVVTVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA+AYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183

Query: 422 DKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAKTLITD*FNHLAEE 601
           D++ +GE NVLIFDLGGGTFDVS+LTI+E      +    T     +   +   NH  +E
Sbjct: 184 DRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHL-GGEDFDSRLVNHFIQE 242

Query: 602 FKRKYKKDL 628
           FKRK KKD+
Sbjct: 243 FKRKNKKDI 251



 Score =  152 bits (368), Expect = 6e-38
 Identities = 67/84 (79%), Positives = 77/84 (91%)
 Frame = +3

Query: 3   DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQI 182
           DTERLIGDAAKNQVA+NP+NT+FDAKRLIGRKFDDP++Q DMKHWPFKVI+  GKP +Q+
Sbjct: 44  DTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQV 103

Query: 183 EFKGETKRFAPEEISSMVLTKMKE 254
           E+KGETK F PEEISSMVL KM+E
Sbjct: 104 EYKGETKTFTPEEISSMVLMKMRE 127


>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 644

 Score =  156 bits (379), Expect = 3e-39
 Identities = 83/129 (64%), Positives = 96/129 (74%)
 Frame = +2

Query: 242 KNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 421
           K   +AEA+LG  V DAVVTVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA+AYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183

Query: 422 DKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAKTLITD*FNHLAEE 601
           D++ + E NVLIFDLGGGTFDVS+LTI+E      +    T     +   +   NH A+E
Sbjct: 184 DRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHL-GGEDFDSRLVNHFAQE 242

Query: 602 FKRKYKKDL 628
           FKRK KKD+
Sbjct: 243 FKRKNKKDI 251



 Score =  150 bits (364), Expect = 2e-37
 Identities = 67/84 (79%), Positives = 76/84 (90%)
 Frame = +3

Query: 3   DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQI 182
           DTERLIGDAAKNQVA+NP+NT+FDAKRLIGR+F+DP++Q DMKHWPFKVI   GKP IQ+
Sbjct: 44  DTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQV 103

Query: 183 EFKGETKRFAPEEISSMVLTKMKE 254
           EFKGETK F PEEISSMVL KM+E
Sbjct: 104 EFKGETKTFTPEEISSMVLLKMRE 127


>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 663

 Score =  133 bits (322), Expect = 2e-32
 Identities = 72/135 (53%), Positives = 91/135 (67%)
 Frame = +2

Query: 242 KNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 421
           K +  AEAYLG  V  AVVTVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGL
Sbjct: 157 KMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGL 216

Query: 422 DKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAKTLITD*FNHLAEE 601
           DK    E++++++DLGGGTFDVS+L+ID       +    T     +       N+LA  
Sbjct: 217 DKT-DTEKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHL-GGEDFDNRVINYLART 274

Query: 602 FKRKYKKDLRLELFA 646
           + RK   D+  +L A
Sbjct: 275 YNRKNNVDVTKDLKA 289



 Score =  107 bits (258), Expect = 1e-24
 Identities = 44/84 (52%), Positives = 65/84 (77%)
 Frame = +3

Query: 3   DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQI 182
           + ERL+G+AAKNQ   NP NT+FD KRLIGRKFD+  + +D+K +PF ++ND  +P +++
Sbjct: 77  EDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEV 136

Query: 183 EFKGETKRFAPEEISSMVLTKMKE 254
              G+ K+F PEEIS+M+L+KMK+
Sbjct: 137 NVGGKKKKFTPEEISAMILSKMKQ 160


>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 613

 Score =  130 bits (315), Expect = 2e-31
 Identities = 56/84 (66%), Positives = 73/84 (86%)
 Frame = +3

Query: 3   DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQI 182
           +TERL+GDAAKNQ A+NP NTVFDAKRLIGR+++DP+ Q+D+KHWPFKVI++ G P I++
Sbjct: 48  ETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEV 107

Query: 183 EFKGETKRFAPEEISSMVLTKMKE 254
            + GE K+F  +EIS+MVLTKMKE
Sbjct: 108 NYLGEKKQFTAQEISAMVLTKMKE 131



 Score =  128 bits (309), Expect = 8e-31
 Identities = 72/129 (55%), Positives = 83/129 (64%)
 Frame = +2

Query: 242 KNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 421
           K +  +EA L   V  AV+TVPAYF+DSQR ATKDAGAIAGLNVLRIINEPTAAA+AYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187

Query: 422 DKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAKTLITD*FNHLAEE 601
           D      +NVLIFDLGGGTFDVS+L I        +    T     +        H  +E
Sbjct: 188 DAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHL-GGEDFDNALVEHFIQE 246

Query: 602 FKRKYKKDL 628
           FKRK K D+
Sbjct: 247 FKRKQKIDI 255



 Score = 48.4 bits (110), Expect = 1e-06
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +1

Query: 505 RGSLFEVKSTAGDTHLGGEDFDNRLVQ 585
           +G +FEV +TAGDTHLGGEDFDN LV+
Sbjct: 215 QGGVFEVLATAGDTHLGGEDFDNALVE 241


>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 674

 Score =  128 bits (309), Expect = 8e-31
 Identities = 76/150 (50%), Positives = 91/150 (60%)
 Frame = +2

Query: 242 KNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 421
           K    A  YLG  V++AVVTVPAYFNDSQRQATK AGAIAGLNVLR++NEPTAAALAYGL
Sbjct: 170 KMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGL 229

Query: 422 DKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAKTLITD*FNHLAEE 601
           DK  K +  V +FDLGGGTFD+SIL ++       S    T     +        H+ E 
Sbjct: 230 DK--KNDAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHL-GGEDFDVALVRHIVET 286

Query: 602 FKRKYKKDLRLELFAALPTPPQRAAEARQR 691
           FK+    DL  +  A      QR  EA ++
Sbjct: 287 FKKNEGLDLSKDRLAV-----QRIREAAEK 311



 Score = 77.8 bits (183), Expect = 2e-15
 Identities = 35/84 (41%), Positives = 57/84 (67%)
 Frame = +3

Query: 3   DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQI 182
           D ERL+G +AK Q  +NP NT F  KRLIGR+F +P++Q+D+K  P+K++ +       +
Sbjct: 93  DGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV-EHSNGDAWL 151

Query: 183 EFKGETKRFAPEEISSMVLTKMKE 254
           E +G+T  ++P +I   +L+KM+E
Sbjct: 152 EARGKT--YSPSQIGGFILSKMRE 173


>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
           Pss1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 720

 Score = 77.4 bits (182), Expect = 2e-15
 Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 4/133 (3%)
 Frame = +2

Query: 242 KNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 421
           K +  AEA L  +V D V+++PA+F D QR+A  +A  IAGLN LR++N+  AAAL YG+
Sbjct: 128 KIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGI 187

Query: 422 DK----NLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAKTLITD*FNH 589
            K      +  R V I D G   + VSI+     +    S     R   ++ +     ++
Sbjct: 188 TKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQFHIKS-TVCDRNLGSRNMDKALIDY 246

Query: 590 LAEEFKRKYKKDL 628
            A EFK KYK D+
Sbjct: 247 FAAEFKEKYKIDV 259



 Score = 44.8 bits (101), Expect = 1e-05
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
 Frame = +3

Query: 3   DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQ-DMKHWPFKVINDCGKPKIQ 179
           +  R +G+AAK+  A N  NTV   KRL GR +DDP+I+  +      K+    G    +
Sbjct: 47  ERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAK 106

Query: 180 IEFKGETKRFAPEEISSMVLTKMK 251
           +++  E   F+  ++ +   TK+K
Sbjct: 107 VQYLNEETAFSNIQLIAAYFTKIK 130


>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 566

 Score = 62.1 bits (144), Expect = 8e-11
 Identities = 29/83 (34%), Positives = 53/83 (63%)
 Frame = +2

Query: 254 AAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGLDKNL 433
           +AE +LG+ V   V++VP YF D+QR+A + A   AGL VL++I++P A  LA    + +
Sbjct: 154 SAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEV 213

Query: 434 KGERNVLIFDLGGGTFDVSILTI 502
             ++ V++ + G    +VS++++
Sbjct: 214 LIDKTVVVANFGATRSEVSVVSV 236


>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 848

 Score = 51.2 bits (117), Expect = 2e-07
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +2

Query: 257 AEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGLDKNLK 436
           AE      + D V+TVP +FN+ QR    +A  I   +VL +I++  A A+ Y L ++  
Sbjct: 152 AEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFS 211

Query: 437 GERNV-LIFDLGGGTFDVSILTID 505
            +    +I+D G G+   ++++ D
Sbjct: 212 TDPTYNIIYDSGSGSTSATVISFD 235


>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
           Sir2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 475

 Score = 29.9 bits (64), Expect = 0.41
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 96  KFDDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKR 206
           K D  ++ +D+++      N+CGKP +++   G+ K+
Sbjct: 280 KVDGSELYEDIRNQRVSYCNECGKPPLKLRRVGQNKK 316


>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 451

 Score = 29.1 bits (62), Expect = 0.71
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +3

Query: 3   DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVIND-CGKPKIQ 179
           D E   GD A     L P   +  AK L+G+  D   I  D    P++V+ D  G  K+ 
Sbjct: 129 DDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGPLKLM 188

Query: 180 IE 185
           I+
Sbjct: 189 ID 190


>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 781

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 289 IPHCTSQIGFRRSFIFVSTMLLISSGANRFVSPLNSICIFG 167
           IP    QI  +  F+   +   I + AN+ +SP +SI IFG
Sbjct: 165 IPESDQQINLQNKFLSTPS---IKNNANKSLSPQDSISIFG 202


>SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase
           Agn2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 433

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 353 AIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVS 490
           A AGL + +I+N  T  A  YG   N+ G  +V++++    T  +S
Sbjct: 388 AAAGLPLFQILNGTTVIAQGYG-PLNILGNNSVVLYNFNFCTTRIS 432


>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
            Spt6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1365

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 347  AGAIAGLNVLRIINEPTAAALAYGLDKNLKGE 442
            A AI  +NV R+ N   A  L  G+D N+K +
Sbjct: 1049 ADAIVPVNVRRVTNRFVAVKLDCGIDGNIKAD 1080


>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 676

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = -3

Query: 172 FGLPQSLITLK---GQCFMSC*ILGSSN---FLPISLFASNTVLLGFKATWFLA 29
           F +PQ +  +K    + F    ILG+S    +LP+++F  + ++LGF   +F A
Sbjct: 504 FWIPQIIQNVKQGTSRSFTWTYILGASVLRLYLPLAIFIDSELILGFPPKYFFA 557


>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
           Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 979

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 15/59 (25%), Positives = 32/59 (54%)
 Frame = -3

Query: 571 YQSLRLPGACRRLWTSLRTTILVDSQDGHVEGSSTQIEDKNISLTLEVLVETVRERGGC 395
           +  L LP   +++W+   T I  D+   ++   + ++  ++ + T+E LV+ V E+ GC
Sbjct: 486 FMDLTLPLPVKQVWSHTVTFIPADT---NLTPLAIEVVLESKAATIEDLVKYVAEKSGC 541


>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 527

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 417 PYASAAAVGSLMMRSTFRP 361
           PYA A+  GSL+ R  FRP
Sbjct: 277 PYALASNYGSLLARIVFRP 295


>SPBC215.03c |csn1||COP9/signalosome complex subunit
           Csn1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 422

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = -2

Query: 284 ALYFPDRLPPLLHFCQHHAANFFWRKSFRLTFELDLYFRFAAVVDYFEGPVLHV 123
           AL+      PL  FC H+A      K++ L     L+  F    D FE   L V
Sbjct: 28  ALFVARNSKPLRSFCVHYAIKELKEKTYNLELYQSLFEEFQ---DCFENEQLDV 78


>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 218

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +2

Query: 284 RDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINE 391
           +DA+ TV A+   S+   T  +GAI+  ++L+ I E
Sbjct: 128 KDAMATVEAHEQASKSGDTSTSGAISKNDILKRIEE 163


>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
           Vps33|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 419 LDKNLKGERNVLIFDLGGGTF 481
           L  N+ G+R VL+F +GG T+
Sbjct: 528 LKTNVPGKRRVLVFFIGGCTY 548


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,839,010
Number of Sequences: 5004
Number of extensions: 56166
Number of successful extensions: 224
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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