Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30927
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 168 4e-42
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 156 2e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 8e-38
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 142 4e-34
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 95 5e-20
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 78 9e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_20927| Best HMM Match : Acyl_transf_1 (HMM E-Value=3.8e-07) 32 0.57
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077) 29 5.4
SB_10453| Best HMM Match : Antimicrobial12 (HMM E-Value=2) 28 7.1
SB_51715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 28 7.1
SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09) 28 7.1
SB_34654| Best HMM Match : zf-C2H2 (HMM E-Value=8e-31) 28 9.4
SB_18196| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 168 bits (409), Expect = 4e-42
Identities = 85/129 (65%), Positives = 94/129 (72%)
Frame = +2
Query: 242 KNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 421
K + AEAYLG V AV+TVPAYFNDSQRQATKDAG IAGLNVLR+INEPTAAALAYGL
Sbjct: 126 KMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGL 185
Query: 422 DKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAKTLITD*FNHLAEE 601
DK+L GE+NVLIFDLGGGTFDVSILTID+ + + NH E
Sbjct: 186 DKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAE 245
Query: 602 FKRKYKKDL 628
FKRKYKKD+
Sbjct: 246 FKRKYKKDM 254
Score = 141 bits (342), Expect = 5e-34
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = +3
Query: 3 DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQI 182
DTERL+GDAAKNQVALNP NT+FDAKRLIGR++DD +Q DMK WPFK+I+D KPKIQ+
Sbjct: 46 DTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQV 105
Query: 183 EFKGETKRFAPEEISSMVLTKMKE 254
E+KGE K FA EEISSMVL KMKE
Sbjct: 106 EYKGERKTFAAEEISSMVLGKMKE 129
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 156 bits (378), Expect = 2e-38
Identities = 81/129 (62%), Positives = 95/129 (73%)
Frame = +2
Query: 242 KNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 421
K + AEAYLG+ V DAVVTVPAYF+DSQRQATKDAG IAGLNVLRIINEPTAAA+AYGL
Sbjct: 126 KMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 422 DKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAKTLITD*FNHLAEE 601
DK + ERNVLI+DLGGGTFDVS+LTI ED + + +H ++
Sbjct: 186 DKKVGVERNVLIYDLGGGTFDVSVLTI-EDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQ 244
Query: 602 FKRKYKKDL 628
FK+KYKKD+
Sbjct: 245 FKQKYKKDI 253
Score = 145 bits (352), Expect = 3e-35
Identities = 67/84 (79%), Positives = 73/84 (86%)
Frame = +3
Query: 3 DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQI 182
DTERLIGDAAKNQVA+NP NTVFDAKRLIGRKFDDP + +DM HWPF VI + +PKIQ+
Sbjct: 46 DTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQV 105
Query: 183 EFKGETKRFAPEEISSMVLTKMKE 254
EFKGE K F PEEISSMVLTKMKE
Sbjct: 106 EFKGEKKSFFPEEISSMVLTKMKE 129
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 154 bits (373), Expect = 8e-38
Identities = 80/130 (61%), Positives = 96/130 (73%)
Frame = +2
Query: 239 DKNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYG 418
+K + AEAYLG V DAVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAA+AYG
Sbjct: 218 NKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYG 277
Query: 419 LDKNLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SPQPATRTWEAKTLITD*FNHLAE 598
LDK + ERNVLIFDLGGGTFDVS+L+I++ S T + + + +
Sbjct: 278 LDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHL-GGEDFDNNMVDFFVK 336
Query: 599 EFKRKYKKDL 628
+FK+KYKKD+
Sbjct: 337 QFKQKYKKDI 346
Score = 125 bits (301), Expect = 4e-29
Identities = 50/74 (67%), Positives = 65/74 (87%)
Frame = +3
Query: 3 DTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQI 182
D ERL+GDAAKNQVA+NP NT+FDAKRLIGR+FDDP ++ DMKHW F+V+N+ G+PK+++
Sbjct: 46 DEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKV 105
Query: 183 EFKGETKRFAPEEI 224
E+KGETK F EE+
Sbjct: 106 EYKGETKTFFAEEV 119
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = +2
Query: 239 DKNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAG 352
+K + AEAYLG V DAVVTVPAYFNDSQRQATKDAG
Sbjct: 150 NKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 142 bits (343), Expect = 4e-34
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = +2
Query: 242 KNEGAAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 421
K + AEAYLG V AVVTVPAYFND+QRQATKDAGAIAGL V+RIINEPTAAA+AYG+
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGM 883
Query: 422 DKNLKGERNVLIFDLGGGTFDVSILTID 505
DK +GE+N+L+FDLGGGTFDVS+LTID
Sbjct: 884 DKK-EGEKNILVFDLGGGTFDVSLLTID 910
Score = 115 bits (276), Expect = 5e-26
Identities = 53/82 (64%), Positives = 64/82 (78%)
Frame = +3
Query: 9 ERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQIEF 188
ERLIGD AKNQ+ NP NTVFDAKRLIGR +DD +Q D+K +PFKV++ KP +Q++
Sbjct: 746 ERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKV 805
Query: 189 KGETKRFAPEEISSMVLTKMKE 254
K E K FA EEIS+MVLTKMKE
Sbjct: 806 KDEIKTFAAEEISAMVLTKMKE 827
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 514 LFEVKSTAGDTHLGGEDFDNRLVQ 585
+FEV +T GDTHLGGEDFD +++
Sbjct: 913 VFEVVATNGDTHLGGEDFDQNVME 936
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 95.1 bits (226), Expect = 5e-20
Identities = 49/82 (59%), Positives = 61/82 (74%)
Frame = +2
Query: 257 AEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGLDKNLK 436
AE L +TV AV++VPA F+ QR AT A ++AG+ VLR+INEPTAAALAYGL K +
Sbjct: 161 AERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-E 219
Query: 437 GERNVLIFDLGGGTFDVSILTI 502
G NV++ DLGGGT DVS+L I
Sbjct: 220 GVANVMVVDLGGGTLDVSLLNI 241
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 15 LIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVIND-CGKPKIQIEFK 191
L+G+ A +Q +NP NT++DAKR IG+ F ++ + K + F+V D G + K
Sbjct: 79 LVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKK 138
Query: 192 GETKRFAPEEISSMVLTKMK 251
G PEEI V+ K++
Sbjct: 139 GNFTVITPEEIGGYVIKKLR 158
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 505 RGSLFEVKSTAGDTHLGGEDFDNRLVQ 585
+G +F + AG+ LGG+DF+ R +Q
Sbjct: 242 QGGMFVTMAMAGNNRLGGQDFNARFMQ 268
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 77.8 bits (183), Expect = 9e-15
Identities = 50/90 (55%), Positives = 57/90 (63%), Gaps = 26/90 (28%)
Frame = +2
Query: 257 AEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLN---------------------- 370
AEA+LG V+ AV+TVPA+FND+QRQATKDAG IAGL+
Sbjct: 30 AEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGR 89
Query: 371 --VLRIINEPTAAALAYGLDK--NLKGERN 448
VLRIINEPTAAA+AYGLDK K ERN
Sbjct: 90 SRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 75.8 bits (178), Expect = 4e-14
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = +2
Query: 257 AEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL---DK 427
AE L + V D V++VP+Y+ D QR+ DA A AGLN LR++N+ TA +LAYG+ D
Sbjct: 188 AEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDL 247
Query: 428 NLKGERNVLIFDLGGGTFDVSILTIDEDRCSK*SP--QPATRTWEAKTLITD*FNHLAEE 601
RNV+ D+G + V I + + S +P + ++ + H A+E
Sbjct: 248 PTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVE---HFAQE 304
Query: 602 FKRKYKKDLRLELFAAL 652
FK KYK D+ + A +
Sbjct: 305 FKTKYKIDVHSSIKAKI 321
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 51 NPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVIN-DCGKPKIQIEFKGETKRFAPEEIS 227
N NT+ KR IGRKF DP +Q+++ H P+KV+ IQ+++ G+ + F+PE++
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 228 SMVLTKMK 251
+M+ T++K
Sbjct: 178 AMLFTRLK 185
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 15/135 (11%)
Frame = +2
Query: 260 EAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL--DKNL 433
E + ++D V+TVP +FN ++R+A A + GLNVL+I+N TA AL YGL K+
Sbjct: 98 EQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSF 157
Query: 434 KG--ERNVLIFDLGGGTFDVSI----LTIDEDR-CSK*SPQPA------TRTWEAKTLIT 574
E++ + +D+G + +I +T +DR S+ +PQ RT +
Sbjct: 158 NDTLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETAPQLVIKGIGFDRTLGGHAIDM 217
Query: 575 D*FNHLAEEFKRKYK 619
+HL + FK+ YK
Sbjct: 218 RLRDHLVQLFKKNYK 232
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +1
Query: 514 LFEVKSTAGDTHLGGEDFDNRLVQ 585
+FEVK+T GDT+LGGEDFDN L++
Sbjct: 23 VFEVKATNGDTYLGGEDFDNTLLK 46
Score = 33.1 bits (72), Expect = 0.25
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 449 VLIFDLGGGTFDVSILTIDE 508
+ ++DLGGGTFD+SIL I +
Sbjct: 2 IAVYDLGGGTFDISILEIQK 21
>SB_20927| Best HMM Match : Acyl_transf_1 (HMM E-Value=3.8e-07)
Length = 426
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 420 RPYASAAAVGSLMMRSTFRPAMAPASLVA 334
RPY S V L+ R TF A+ PAS+VA
Sbjct: 374 RPYGSVEEVRRLVWRCTFSSAVGPASIVA 402
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 54 PNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISSM 233
P++ + A R++GRK ++ D KV KP + K F P+ ++S+
Sbjct: 572 PSHEIAQAWRILGRKSSRSSLESDTLE--IKVDPKDSKPTKRNILKQVASVFDPQGLASL 629
Query: 234 VLTKMKERRKPIWEVQC 284
+ + K + +W QC
Sbjct: 630 FVLRAKLILQQLWRQQC 646
>SB_27251| Best HMM Match : Extensin_2 (HMM E-Value=0.077)
Length = 1043
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 471 PPRSKIRTFLSPLRFLSRPYASAAAVGSLMMRSTFRPAMAPA 346
PP K+ SPL+ L R + A V LMM++ +P P+
Sbjct: 384 PPSPKLSKSPSPLQKLRRSPSPAEMVQQLMMQTQMQPRRPPS 425
>SB_10453| Best HMM Match : Antimicrobial12 (HMM E-Value=2)
Length = 180
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 561 FASQVRVAGCGLHFEQRSSSIVRMDT-SKVPPPRSKIRTFLSPLRFLSRPYA 409
F + CG HF Q + S VR T + V PR+++ F L+ R Y+
Sbjct: 119 FLWDISAKTCGYHFYQPTHSTVREPTPTPVHCPRAEVYVFAKWLKEKQRVYS 170
>SB_51715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 561 FASQVRVAGCGLHFEQRSSSIVRMDT-SKVPPPRSKIRTFLSPLRFLSRPYA 409
F + CG HF Q + S VR T + V PR+++ F L+ R Y+
Sbjct: 191 FLWDISAKTCGYHFYQPTHSTVREPTPTPVHCPRAEVYVFAKWLKEKQRVYS 242
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 514 TILVDSQDGHVEGSSTQIEDKNISL-TLEVLVETVRERGGCGL 389
T+ V GH+ S + KNISL + E+ V T++E C +
Sbjct: 175 TVTVTETRGHIPSSKYRTLTKNISLFSREIEVTTLKEHISCAI 217
>SB_8285| Best HMM Match : Filamin (HMM E-Value=1.1e-09)
Length = 474
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 511 ILVDSQDGHVEGSSTQIEDKNISLTLEVLVETVRERGGCGLV 386
++VD +DG E S T ++ +S+ + V+ E + GGC V
Sbjct: 424 VIVDRRDGTYEVSYTPMQRGTVSINVRVMGEAI---GGCPFV 462
>SB_34654| Best HMM Match : zf-C2H2 (HMM E-Value=8e-31)
Length = 624
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 442 EKCSYLRSGWRNLRRVHPDYRRGSLFEV 525
++ +YL G R++ ++HP G LFE+
Sbjct: 12 QRSAYLLRGLRSIGKIHPKPSAGRLFEI 39
>SB_18196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 199 RNDLRQKKLAAWC*QK*RSGGSLSGKYSAGCGSHSSGILQRLP 327
R+ LR+KKL A Q+ S++G+ + CG H R P
Sbjct: 104 RSKLRRKKLYATSGQECYKIQSMAGRCAKTCGQHKRAAAARTP 146
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,016,263
Number of Sequences: 59808
Number of extensions: 434342
Number of successful extensions: 1472
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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