Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30926
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    28   0.060
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    28   0.060
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.9  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   6.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   6.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.1  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 28.3 bits (60), Expect = 0.060
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 330 SSVFVVLMQVYSRVFLVCGALLATQGATTSPGLPLCILAWSITEI 464
           +SV  +L   + R + +C  L A    T +    +C+LAW I  +
Sbjct: 156 ASVLTILAISFERYYAICKPLKAGYICTKTRASLICLLAWFIAAL 200


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 0.060
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 330 SSVFVVLMQVYSRVFLVCGALLATQGATTSPGLPLCILAWSITEI 464
           +SV  +L   + R + +C  L A    T +    +C+LAW I  +
Sbjct: 156 ASVLTILAISFERYYAICKPLKAGYICTKTRASLICLLAWFIAAL 200


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -2

Query: 238 PKYHGSKNVLMTAIACKTIQEFERRYRQEDKSFQSKVQRCC 116
           PK+   + +L  A     +QEF + + +E K     ++  C
Sbjct: 121 PKWQNRRKILTPAFHFNILQEFIQIFNEETKRLVEDLEAEC 161


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -2

Query: 250 SKKHPKYHGSKNVLMTAIACKTIQEFERRYRQEDK 146
           + + PK+   + +L  A     +QEF + + +E K
Sbjct: 117 TSRGPKWQNRRKILTPAFHFNILQEFIQIFNEETK 151


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 481 TLSIWSILYLIADVFEVFHVFS*C 552
           TL +WS L+      EV HV   C
Sbjct: 94  TLKLWSQLFSTFAGIEVLHVVKQC 117


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 406 PCVASKAPHTRNT 368
           PC+A  AP  +NT
Sbjct: 89  PCIAGSAPCRKNT 101


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 175 TLGWSYMLWQSLVHFLNRGTLDAFWSESSGLSLY 276
           T G  ++ W+  +       LDA WS ++G+ ++
Sbjct: 379 TRGDLWLSWEEGMKVFEELLLDADWSVNAGMWMW 412


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 162 IDKKINLSNRKSR 124
           IDKK+N  N KSR
Sbjct: 56  IDKKLNNRNSKSR 68


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 122 PLDFRLERFIFLSIT 166
           P+DF L  FIF S+T
Sbjct: 362 PVDFTLLGFIFGSVT 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,397
Number of Sequences: 336
Number of extensions: 3815
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)