Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30924
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    22   4.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 333 PTVRECSSDSYWTV 374
           PTVR C+ D+ W V
Sbjct: 248 PTVRNCTGDTSWRV 261


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 408 CHFHSGTQRLPTQNLFGPEVKTPKTCVHK*YS 503
           C++ S   + P    F PE   P  C H  Y+
Sbjct: 27  CYYASWGAQRPGNGQFVPEDINPDLCTHINYA 58


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 526 SLSNLCETEYYLCTQVFGV 470
           S+SN CE EY  CT V  +
Sbjct: 494 SVSN-CENEYCECTHVVNI 511


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -1

Query: 387 SYVSILSSNCQSCILGLWVVQFTFLLSGCT 298
           +YV+   +N +  I+  W+  F   ++ C+
Sbjct: 293 AYVTRTGANIKKLIVNTWISLFCVKVTNCS 322


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -1

Query: 477  LGFLLLAQRGFGLEAVGSRCESDSVVLAVRSYVSILSSNCQSCI 346
            + FLL+ Q  F L  V    E+D + L    +VS L +    CI
Sbjct: 882  ISFLLVTQTIFALCVVLQLQENDWLQLGYLIFVSTLYTANVVCI 925


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,273
Number of Sequences: 336
Number of extensions: 4039
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)