Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30922
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   1.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    24   1.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.9  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.6  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.6  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.6  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.6  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.6  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   2.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   3.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   5.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.8  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -1

Query: 546 GHPVYCSRPWDC*FGVGFLGESGPNAPIVLGTN 448
           G   YC R W+C  G   L +  PN  +  G N
Sbjct: 37  GDETYCDRYWECVNGQQELYDC-PNGLVFAGKN 68



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 549 FGHPVYCSRPWDC 511
           FGH   C+R W C
Sbjct: 106 FGHETSCTRYWTC 118


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 568 GEYYYH*IRTRLPLSKIPGE*YSSDPPVEGTTRLCNRN 681
           G+  Y+ +++   L ++  E     PP   T RLCN+N
Sbjct: 318 GKISYNVLQSMKYLDQVVCESLRLWPPAPQTDRLCNKN 355


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 731 RKTPRKFPSNGEMSMEGLRLHNLVVPS 651
           R  P+K   NG+    G R H  ++P+
Sbjct: 743 RNVPQKCIFNGQAYFPGSRFHPFLIPT 769


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
           SE+     L  TP +LW P +L
Sbjct: 70  SEYGGVKDLRITPNKLWKPDVL 91


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
           SE+     L  TP +LW P +L
Sbjct: 70  SEYGGVKDLRITPNKLWKPDVL 91


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
           SE+     L  TP +LW P +L
Sbjct: 70  SEYGGVKDLRITPNKLWKPDVL 91


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
           SE+     L  TP +LW P +L
Sbjct: 70  SEYGGVKDLRITPNKLWKPDVL 91


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
           SE+     L  TP +LW P +L
Sbjct: 70  SEYGGVKDLRITPNKLWKPDVL 91


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 22/78 (28%), Positives = 32/78 (41%)
 Frame = +3

Query: 84  KILFGRIIKEKTSENFDYRRLGQLGVECAKYLRGKYGQNNVILSDIIKPTEEIVKDGLTF 263
           K   GR I    S N   + L  +G+E    L         +L D+   T  +  D LT 
Sbjct: 45  KFARGRSINMALS-NRGRKALRAVGIEKI-ILESAIPMKGRLLHDLKGRTTSVPYDALTG 102

Query: 264 SSIYLTSKDFRKS**ITE 317
             IY  S+D+  +  +TE
Sbjct: 103 QCIYSISRDYLNNVLLTE 120


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 22/78 (28%), Positives = 32/78 (41%)
 Frame = +3

Query: 84  KILFGRIIKEKTSENFDYRRLGQLGVECAKYLRGKYGQNNVILSDIIKPTEEIVKDGLTF 263
           K   GR I    S N   + L  +G+E    L         +L D+   T  +  D LT 
Sbjct: 45  KFARGRSINMALS-NRGRKALRAVGIEKI-ILESAIPMKGRLLHDLKGRTTSVPYDALTG 102

Query: 264 SSIYLTSKDFRKS**ITE 317
             IY  S+D+  +  +TE
Sbjct: 103 QCIYSISRDYLNNVLLTE 120


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 22/78 (28%), Positives = 32/78 (41%)
 Frame = +3

Query: 84  KILFGRIIKEKTSENFDYRRLGQLGVECAKYLRGKYGQNNVILSDIIKPTEEIVKDGLTF 263
           K   GR I    S N   + L  +G+E    L         +L D+   T  +  D LT 
Sbjct: 45  KFARGRSINMALS-NRGRKALRAVGIEKI-ILESAIPMKGRLLHDLKGRTTSVPYDALTG 102

Query: 264 SSIYLTSKDFRKS**ITE 317
             IY  S+D+  +  +TE
Sbjct: 103 QCIYSISRDYLNNVLLTE 120


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 286 FEVKYIDENVRPSLTISSV 230
           F  K  DE+++P LT++SV
Sbjct: 337 FGAKVHDESIKPLLTLNSV 355


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/51 (23%), Positives = 29/51 (56%)
 Frame = -3

Query: 331 NQPIDSVIYYDFLKSFEVKYIDENVRPSLTISSVGLIMSDSMTLFWPYFPR 179
           N  +D+++  +  +   ++ I +++R S ++    LI  D+++   P+FPR
Sbjct: 149 NNQLDALVKVEMTRVSLLQLI-KSLRQSSSLEHCTLIGEDNISAKNPWFPR 198


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 329 IHFSGLLSAIGEQNVPLAVRVNIEGMHNVIE 421
           IH SG++     QN+PL     I+ + N+IE
Sbjct: 319 IH-SGVVRGDNGQNIPLTEFEGIDVLGNIIE 348


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 458 STIGAFGPDSPRNP 499
           ST+G F P  P +P
Sbjct: 33  STLGQFSPQGPNSP 46


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 624 GVIFQ*SASGGHYQIMQSQSFHGHF 698
           GV  Q + S G Y +  S + +GHF
Sbjct: 620 GVSVQCTVSKGDYPLNISWTLNGHF 644


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,722
Number of Sequences: 336
Number of extensions: 3997
Number of successful extensions: 24
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)