Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30922
(735 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058410-1|AAL13639.1| 367|Drosophila melanogaster GH18546p pro... 198 8e-51
AE014296-3373|AAF51607.1| 367|Drosophila melanogaster CG5955-PA... 198 8e-51
AY058582-1|AAL13811.1| 350|Drosophila melanogaster LD27852p pro... 33 0.30
AE014296-117|AAF47398.1| 350|Drosophila melanogaster CG12030-PA... 33 0.30
AY069038-1|AAL39183.1| 218|Drosophila melanogaster GH02722p pro... 32 0.93
AE014298-1176|AAF46372.1| 218|Drosophila melanogaster CG12123-P... 32 0.93
EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein. 30 2.8
BT001298-1|AAN71053.1| 323|Drosophila melanogaster AT11877p pro... 29 8.7
AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB... 29 8.7
AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA... 29 8.7
AE013599-3980|AAF47290.1| 323|Drosophila melanogaster CG2857-PA... 29 8.7
>AY058410-1|AAL13639.1| 367|Drosophila melanogaster GH18546p
protein.
Length = 367
Score = 198 bits (482), Expect = 8e-51
Identities = 100/143 (69%), Positives = 105/143 (73%)
Frame = +2
Query: 254 PYIFVDILDFKGLQKIVVDHRVDWLIHFSGLLSAIGEQNVPLAVRVNIEGMHNVIELAKQ 433
PYIF DILDFKGLQKIVVDHR+DWLIHFS LLSA+GEQNVPLAVRVNIEG+HNVIELAKQ
Sbjct: 91 PYIFADILDFKGLQKIVVDHRIDWLIHFSALLSAVGEQNVPLAVRVNIEGVHNVIELAKQ 150
Query: 434 YKLXIFVPSTIGAFGPDSPRNPTPN*QSQGREQYTGCPKFTRSC*ESTIIIKFGLDFRCL 613
YKL IFVPSTIGAFGPDSPRNPTPN Q G K KFGLDFRCL
Sbjct: 151 YKLRIFVPSTIGAFGPDSPRNPTPNVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDFRCL 210
Query: 614 RFPGSNIPVIRQWRALPDYAIAI 682
RFPG I DYA+A+
Sbjct: 211 RFPGV-ISSDPPGGGTTDYAVAV 232
Score = 58.4 bits (135), Expect = 9e-09
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +3
Query: 144 LGQLGVECAKYLRGKYGQNNVILSDIIKPTEEIVKDGLTFSSIYLTSKDFRK 299
LGQLG+ECAK LR +YG NVILSDIIKP++ ++++G + L K +K
Sbjct: 54 LGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVLENGPYIFADILDFKGLQK 105
>AE014296-3373|AAF51607.1| 367|Drosophila melanogaster CG5955-PA
protein.
Length = 367
Score = 198 bits (482), Expect = 8e-51
Identities = 100/143 (69%), Positives = 105/143 (73%)
Frame = +2
Query: 254 PYIFVDILDFKGLQKIVVDHRVDWLIHFSGLLSAIGEQNVPLAVRVNIEGMHNVIELAKQ 433
PYIF DILDFKGLQKIVVDHR+DWLIHFS LLSA+GEQNVPLAVRVNIEG+HNVIELAKQ
Sbjct: 91 PYIFADILDFKGLQKIVVDHRIDWLIHFSALLSAVGEQNVPLAVRVNIEGVHNVIELAKQ 150
Query: 434 YKLXIFVPSTIGAFGPDSPRNPTPN*QSQGREQYTGCPKFTRSC*ESTIIIKFGLDFRCL 613
YKL IFVPSTIGAFGPDSPRNPTPN Q G K KFGLDFRCL
Sbjct: 151 YKLRIFVPSTIGAFGPDSPRNPTPNVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDFRCL 210
Query: 614 RFPGSNIPVIRQWRALPDYAIAI 682
RFPG I DYA+A+
Sbjct: 211 RFPGV-ISSDPPGGGTTDYAVAV 232
Score = 58.4 bits (135), Expect = 9e-09
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +3
Query: 144 LGQLGVECAKYLRGKYGQNNVILSDIIKPTEEIVKDGLTFSSIYLTSKDFRK 299
LGQLG+ECAK LR +YG NVILSDIIKP++ ++++G + L K +K
Sbjct: 54 LGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVLENGPYIFADILDFKGLQK 105
>AY058582-1|AAL13811.1| 350|Drosophila melanogaster LD27852p
protein.
Length = 350
Score = 33.5 bits (73), Expect = 0.30
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Frame = +2
Query: 266 VDILDFKGLQKIVVDHRVDWLIHFSGLLSAIGEQ-NVPLA-VRVNIEGMHNVIELAKQYK 439
VDI D + ++ + +H++D + HF+ L A+GE +PL N+ G + ++E
Sbjct: 66 VDITDREQVRSVFQEHKIDMVAHFAA-LKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 440 LXIFVPSTIGA------FGPDSPRNPTPN*QS-QGREQY 535
+ FV S+ F P + +PT N S G+ +Y
Sbjct: 125 VFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKY 163
>AE014296-117|AAF47398.1| 350|Drosophila melanogaster CG12030-PA
protein.
Length = 350
Score = 33.5 bits (73), Expect = 0.30
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Frame = +2
Query: 266 VDILDFKGLQKIVVDHRVDWLIHFSGLLSAIGEQ-NVPLA-VRVNIEGMHNVIELAKQYK 439
VDI D + ++ + +H++D + HF+ L A+GE +PL N+ G + ++E
Sbjct: 66 VDITDREQVRSVFQEHKIDMVAHFAA-LKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 440 LXIFVPSTIGA------FGPDSPRNPTPN*QS-QGREQY 535
+ FV S+ F P + +PT N S G+ +Y
Sbjct: 125 VFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKY 163
>AY069038-1|AAL39183.1| 218|Drosophila melanogaster GH02722p
protein.
Length = 218
Score = 31.9 bits (69), Expect = 0.93
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 257 YIFVDILDFKGLQKIVVDHRVDWLIHFSGLLSAIGEQ 367
Y F D+L ++I V+H + WL G SA+GEQ
Sbjct: 88 YKFADMLAHTLWERIEVEHLMSWLSTLGGGFSALGEQ 124
>AE014298-1176|AAF46372.1| 218|Drosophila melanogaster CG12123-PA
protein.
Length = 218
Score = 31.9 bits (69), Expect = 0.93
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 257 YIFVDILDFKGLQKIVVDHRVDWLIHFSGLLSAIGEQ 367
Y F D+L ++I V+H + WL G SA+GEQ
Sbjct: 88 YKFADMLAHTLWERIEVEHLMSWLSTLGGGFSALGEQ 124
>EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 30.3 bits (65), Expect = 2.8
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +1
Query: 136 TGDLANWVSSVLNISVGNMARTTSYCQTLLNQP---KKSLRTALHFRRYT*LQRTSENRS 306
TGDL + + LNI G + TSY +L N P + SL RR + T +
Sbjct: 301 TGDLPHSIRRSLNIPFGGSSTATSYNNSLSNLPNHKRPSLIGKQTHRRDLTMDETGTGPA 360
Query: 307 RSQSRLVDSFLGXTQRNRGT 366
S ++ L ++ N T
Sbjct: 361 MSSEEHLNHLLRISRTNNNT 380
>BT001298-1|AAN71053.1| 323|Drosophila melanogaster AT11877p
protein.
Length = 323
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -3
Query: 307 YYDFLKSFEVKYIDENVRPSLTISSVGLIMSDSMTL--FWPYFPRRYLAHSTPNW 149
Y + +F+ Y +E +R + G ++S S L FW Y R +AH W
Sbjct: 52 YRGVIHAFKSVYAEEGMRGMFRGHNSGQVLSISYALVQFWSYEQLRSMAHQFDYW 106
>AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB,
isoform B protein.
Length = 3966
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 244 TISSVGLIMSDSMTLFWPYFPRRYLAHSTPNW 149
T+S G+I + TL W F + +L + P W
Sbjct: 1695 TVSRCGMIYMEPSTLGWRAFAKSWLKKADPRW 1726
>AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA,
isoform A protein.
Length = 3868
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 244 TISSVGLIMSDSMTLFWPYFPRRYLAHSTPNW 149
T+S G+I + TL W F + +L + P W
Sbjct: 1695 TVSRCGMIYMEPSTLGWRAFAKSWLKKADPRW 1726
>AE013599-3980|AAF47290.1| 323|Drosophila melanogaster CG2857-PA
protein.
Length = 323
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -3
Query: 307 YYDFLKSFEVKYIDENVRPSLTISSVGLIMSDSMTL--FWPYFPRRYLAHSTPNW 149
Y + +F+ Y +E +R + G ++S S L FW Y R +AH W
Sbjct: 52 YRGVIHAFKSVYAEEGMRGMFRGHNSGQVLSISYALVQFWSYEQLRSMAHQFDYW 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,625,533
Number of Sequences: 53049
Number of extensions: 739013
Number of successful extensions: 1618
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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