Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30922
(735 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 27 0.18
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate isome... 23 3.0
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 23 3.9
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 23 3.9
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 5.2
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 5.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 5.2
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 22 6.9
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 22 6.9
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 27.1 bits (57), Expect = 0.18
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = -3
Query: 319 DSVIYYDFLKSFEVKYIDENVRPSLTISSVGLIMSDSMTLFWPYFPR 179
D ++ D + + ++ I N+R S + V L+ +S+++ P+FPR
Sbjct: 131 DVLVKVDMTRQYLLQLI-RNLRQSSALDGVTLLADNSVSIKDPWFPR 176
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
SE+ L TP +LW P IL
Sbjct: 53 SEYGGVKDLRITPNKLWKPDIL 74
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
SE+ L TP +LW P IL
Sbjct: 53 SEYGGVKDLRITPNKLWKPDIL 74
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
SE+ L TP +LW P IL
Sbjct: 53 SEYGGVKDLRITPNKLWKPDIL 74
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
SE+ L TP +LW P IL
Sbjct: 53 SEYGGVKDLRITPNKLWKPDIL 74
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
SE+ L TP +LW P IL
Sbjct: 53 SEYGGVKDLRITPNKLWKPDIL 74
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
SE+ L TP +LW P IL
Sbjct: 53 SEYGGVKDLRITPNKLWKPDIL 74
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
SE+ L TP +LW P IL
Sbjct: 121 SEYGGVKDLRITPNKLWKPDIL 142
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 595 SEFNDNSTLLTTPRELWTPRIL 530
SE+ L TP +LW P IL
Sbjct: 121 SEYGGVKDLRITPNKLWKPDIL 142
>EF493864-1|ABP65286.1| 247|Apis mellifera triosephoshpate
isomerase protein.
Length = 247
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 278 QVYRRKCKAVLNDFFGWFNNV*QYDVVLAI 189
+V R+ KA+ N W N V Y+ V AI
Sbjct: 140 EVVFRQTKAIANKINSWDNVVVAYEPVWAI 169
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 111 EKTSENFDYRRLGQLGVECAKYLRGKYGQNNVILSDI 221
E SE+F R+G G+ + G YG N+ + I
Sbjct: 246 ESGSESFKRARMGFHGMRGKRDAAGIYGSNSSTVGTI 282
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 111 EKTSENFDYRRLGQLGVECAKYLRGKYGQNNVILSDI 221
E SE+F R+G G+ + G YG N+ + I
Sbjct: 246 ESGSESFKRARMGFHGMRGKRDAAGIYGSNSSTVGTI 282
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 93 FGRIIKEKTSENFDYRRLGQ 152
FG + T+EN ++RR+G+
Sbjct: 191 FGIDMSSMTNENSEFRRMGR 210
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -2
Query: 203 VVLAIFPTEIFSTLDTQLAKSPVIKIFGGLLLNN 102
+ L I EI++ + + +P + + GG+ NN
Sbjct: 10 ISLIILNDEIYNIIASPQLNNPTLFMIGGVFSNN 43
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 169 LNISVGNMARTTSYCQTLLNQPKKSLRTALHF 264
+++S + + C TL P K +T++H+
Sbjct: 341 ISVSYPSTETLNTKCNTLERTPSKCSQTSVHY 372
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 21.8 bits (44), Expect = 6.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 196 WPYFPRRYLAHSTPNWPS 143
W Y+ Y + TPN PS
Sbjct: 213 WGYYAYPYCYNLTPNQPS 230
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 335 NESTNRLCDLLRFSEVL*SQVYRRKCKAVLND 240
+++ L +L FS V+ + KC+AV ND
Sbjct: 5 SKNATHLITVLLFSFVVILLIIPSKCEAVSND 36
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,588
Number of Sequences: 438
Number of extensions: 4580
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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