Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30921
         (713 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY033237-1|AAK44223.1|  467|Homo sapiens alcohol dehydrogenase 8...   127   4e-29
AK056992-1|BAB71335.1|  419|Homo sapiens protein ( Homo sapiens ...   127   4e-29

>AY033237-1|AAK44223.1|  467|Homo sapiens alcohol dehydrogenase 8
           protein.
          Length = 467

 Score =  127 bits (306), Expect = 4e-29
 Identities = 60/119 (50%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
 Frame = -3

Query: 606 AGVGIGNAGVHLCHGLAYPIAGNVKSFVPEDYGPIR*SLT-ALSVVMTAPAVFRFTASSD 430
           AG+G GNAGVHLCHG++YPI+G VK +  +DY      +   LSVV+T+PAVF FTA   
Sbjct: 317 AGIGFGNAGVHLCHGMSYPISGLVKMYKAKDYNVDHPLVPHGLSVVLTSPAVFTFTAQMF 376

Query: 429 PEKHLEAASLLGADVTNAKRKDAGRILSDVILLYMDKLKIENGLKALGYTNDDIPDLVR 253
           PE+HLE A +LGAD   A+ +DAG +L+D +  ++  L +++GL A+GY+  DIP LV+
Sbjct: 377 PERHLEMAEILGADTRTARIQDAGLVLADTLRKFLFDLDVDDGLAAVGYSKADIPALVK 435


>AK056992-1|BAB71335.1|  419|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32430 fis, clone SKMUS2001129, weakly similar to
           NAD-DEPENDENT METHANOL DEHYDROGENASE (EC 1.1.1.244). ).
          Length = 419

 Score =  127 bits (306), Expect = 4e-29
 Identities = 60/119 (50%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
 Frame = -3

Query: 606 AGVGIGNAGVHLCHGLAYPIAGNVKSFVPEDYGPIR*SLT-ALSVVMTAPAVFRFTASSD 430
           AG+G GNAGVHLCHG++YPI+G VK +  +DY      +   LSVV+T+PAVF FTA   
Sbjct: 269 AGIGFGNAGVHLCHGMSYPISGLVKMYKAKDYNVDHPLVPHGLSVVLTSPAVFTFTAQMF 328

Query: 429 PEKHLEAASLLGADVTNAKRKDAGRILSDVILLYMDKLKIENGLKALGYTNDDIPDLVR 253
           PE+HLE A +LGAD   A+ +DAG +L+D +  ++  L +++GL A+GY+  DIP LV+
Sbjct: 329 PERHLEMAEILGADTRTARIQDAGLVLADTLRKFLFDLDVDDGLAAVGYSKADIPALVK 387


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,479,351
Number of Sequences: 237096
Number of extensions: 1943276
Number of successful extensions: 3909
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3907
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)