Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30919
         (736 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Q8K9 Cluster: Dynein heavy chain, putative; n=4; Euka...    34   3.1  
UniRef50_UPI0000F2B0A8 Cluster: PREDICTED: similar to guanylyl c...    33   9.6  
UniRef50_Q0C6G5 Cluster: Putative uncharacterized protein; n=1; ...    33   9.6  

>UniRef50_Q4Q8K9 Cluster: Dynein heavy chain, putative; n=4;
            Eukaryota|Rep: Dynein heavy chain, putative - Leishmania
            major
          Length = 4241

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 20/54 (37%), Positives = 31/54 (57%)
 Frame = +2

Query: 383  LDPTSCLPSSTLEASTISRMLPSAYSGCDNIIG*DHTFGH*SLLEFVRSGAAHD 544
            LDP +C+P S L AS I+ + P   S  + +    +T+    L++ VRSGA H+
Sbjct: 1935 LDPATCVPISALIASWIAALPPYLESQRETLKRLANTYVK-ELVQLVRSGAVHE 1987


>UniRef50_UPI0000F2B0A8 Cluster: PREDICTED: similar to guanylyl
           cyclase-G; n=6; Euteleostomi|Rep: PREDICTED: similar to
           guanylyl cyclase-G - Monodelphis domestica
          Length = 1111

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +1

Query: 4   SQALLGDNRHNLHTSYIINYIICMHNITWTYLKSREQISEINFKLLFVML 153
           +Q LL ++  ++ +S  I  +IC  N  WT L++ E++     K +FV+L
Sbjct: 210 NQTLLQEDLQHITSSARIIILICSMNEAWTILQATEKLGPAPGKFVFVIL 259


>UniRef50_Q0C6G5 Cluster: Putative uncharacterized protein; n=1;
           Pelobacter carbinolicus DSM 2380|Rep: Putative
           uncharacterized protein - Pelobacter carbinolicus
           (strain DSM 2380 / Gra Bd 1)
          Length = 69

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +1

Query: 187 QGLILYSFKR*RAFYVVPPYTLMYCKIAIVNPEGRLLLETEKSSVWTVSL 336
           Q  IL + KR    + +PP  L   +I    P GRL   T  SSVW+V +
Sbjct: 9   QDSILIALKRGGKPHGLPPLFLFGLQICRAKPHGRLFGATVMSSVWSVEM 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,466,694
Number of Sequences: 1657284
Number of extensions: 14009978
Number of successful extensions: 29950
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29939
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)