Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30919
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   5.6  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   5.6  

>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -1

Query: 370 RSTPSVSLLNASGKLSKQNFFQFLAEVCLPGSQSQFCNT*VCTVVLHRMLFTA*NC 203
           R+   V+LL+   K S +    F   V L       C T     ++ R LF+A NC
Sbjct: 53  RNCGGVNLLDLMYKESHRWAMPFQTYVTLTMLDMHTCQTDKSVKLMERSLFSARNC 108


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -1

Query: 370 RSTPSVSLLNASGKLSKQNFFQFLAEVCLPGSQSQFCNT*VCTVVLHRMLFTA*NC 203
           R+   V+LL+   K S +    F   V L       C T     ++ R LF+A NC
Sbjct: 53  RNCGGVNLLDLMYKESHRWAMPFQTYVTLTMLDMHTCQTDKSVKLMERSLFSARNC 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,083
Number of Sequences: 2352
Number of extensions: 15605
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)