Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30918
(710 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit... 168 1e-40
UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1; ... 144 3e-33
UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, wh... 121 2e-26
UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit co... 115 1e-24
UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4; Euk... 111 1e-23
UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamo... 93 5e-18
UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit, p... 85 2e-15
UniRef50_A3C0K6 Cluster: Putative uncharacterized protein; n=1; ... 84 4e-15
UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lambl... 77 4e-13
UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2; ... 72 1e-11
UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=... 71 3e-11
UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=... 68 2e-10
UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=... 68 2e-10
UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=... 68 3e-10
UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytic... 67 5e-10
UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=... 66 1e-09
UniRef50_A3GFV9 Cluster: Protein involved in co-translational pa... 65 2e-09
UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n... 65 2e-09
UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=... 64 3e-09
UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=... 64 4e-09
UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa... 60 5e-08
UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n... 60 5e-08
UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=... 60 7e-08
UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n... 56 7e-07
UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7; Sac... 56 9e-07
UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=... 56 1e-06
UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1; ... 55 2e-06
UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=... 53 6e-06
UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n... 53 6e-06
UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=... 51 3e-05
UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=... 50 4e-05
UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136, w... 50 6e-05
UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3; ... 49 1e-04
UniRef50_UPI00015BB126 Cluster: protein translocase subunit secY... 47 5e-04
UniRef50_Q7QS31 Cluster: GLP_661_12509_12237; n=1; Giardia lambl... 46 7e-04
UniRef50_A7QN16 Cluster: Chromosome undetermined scaffold_129, w... 46 0.001
UniRef50_A2ZMZ3 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:... 41 0.026
UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit co... 40 0.046
UniRef50_A5C0J8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.43
UniRef50_Q2HBA1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.43
UniRef50_A6QYP0 Cluster: Predicted protein; n=1; Ajellomyces cap... 37 0.56
UniRef50_Q9C2B1 Cluster: Putative uncharacterized protein B11N2.... 35 2.3
UniRef50_A0TSH0 Cluster: LigA; n=1; Burkholderia cenocepacia MC0... 34 3.0
UniRef50_A6SX11 Cluster: Uncharacterized conserved protein; n=1;... 34 4.0
UniRef50_UPI0000DD833C Cluster: PREDICTED: hypothetical protein;... 33 5.2
UniRef50_A4MGD6 Cluster: YaeQ protein family; n=2; Burkholderia ... 33 5.2
UniRef50_Q6Z0Y6 Cluster: Putative uncharacterized protein OSJNBa... 33 5.2
UniRef50_Q4Q8V2 Cluster: Putative uncharacterized protein; n=3; ... 33 5.2
UniRef50_Q0S5C7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_A4JRR1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
>UniRef50_Q9H9S3 Cluster: Protein transport protein Sec61 subunit
alpha isoform 2; n=176; Eukaryota|Rep: Protein transport
protein Sec61 subunit alpha isoform 2 - Homo sapiens
(Human)
Length = 476
Score = 168 bits (408), Expect = 1e-40
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
SSAKDVAKQLKEQQMVMRGHRD SM+HELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG
Sbjct: 385 SSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 444
Query: 437 TGILLAVTIIYQYFEIFVKEQAEM 508
TGILLAVTIIYQYFEIFVKEQAE+
Sbjct: 445 TGILLAVTIIYQYFEIFVKEQAEV 468
Score = 124 bits (298), Expect = 3e-27
Identities = 56/89 (62%), Positives = 65/89 (73%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
NLYVISQML+V+FSGNFLVN+LG WAD LCYYLSPPES+ I DPV
Sbjct: 300 NLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPV 359
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
H ++Y++FMLGSCAFFSKTWI+VS K
Sbjct: 360 HVVVYIIFMLGSCAFFSKTWIEVSGSSAK 388
>UniRef50_A3BXT8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 377
Score = 144 bits (348), Expect = 3e-33
Identities = 69/82 (84%), Positives = 77/82 (93%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
SSAKDVAKQLKEQQMVM GHR++++ ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSG
Sbjct: 288 SSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSG 347
Query: 437 TGILLAVTIIYQYFEIFVKEQA 502
TGILLAVTIIYQYFE F KE+A
Sbjct: 348 TGILLAVTIIYQYFETFEKERA 369
Score = 90.6 bits (215), Expect = 3e-17
Identities = 44/89 (49%), Positives = 56/89 (62%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
NLY ISQ+L ++SGNFLVN+LG W + L YY++ P SLA + +P
Sbjct: 205 NLYFISQLLYRRYSGNFLVNLLGKWKESEYSGHSVPVGG--LAYYVTAPSSLADVLANPF 262
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
HAL YV+FML +CA FSKTWI+VS K
Sbjct: 263 HALFYVVFMLSACALFSKTWIEVSGSSAK 291
>UniRef50_A0CU87 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=11; Eukaryota|Rep: Chromosome
undetermined scaffold_28, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 474
Score = 121 bits (292), Expect = 2e-26
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
SS KDVAKQLKEQ M + G+RD+SM L RYIP AA+FGG+CIGAL++LADFLGAIGSG
Sbjct: 386 SSPKDVAKQLKEQDMQIVGYRDSSMKDVLKRYIPIAASFGGMCIGALTILADFLGAIGSG 445
Query: 437 TGILLAVTIIYQYFEIFVKEQAE 505
TGILL+VTIIY YFE KE+ +
Sbjct: 446 TGILLSVTIIYGYFETLKKEKEQ 468
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/89 (46%), Positives = 54/89 (60%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
NLY +SQ+L F GNFL+ +LG + + L YY+SPP S++ DP+
Sbjct: 304 NLYFLSQILYRNFKGNFLIRLLGYYQELENGQTVPIGG---LVYYVSPPRSISEAIFDPI 360
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
H +LY F+LG+CA FSKTWIDVS PK
Sbjct: 361 HTILYTAFILGTCAVFSKTWIDVSGSSPK 389
>UniRef50_Q22MG2 Cluster: Preprotein translocase, SecY subunit
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Preprotein translocase, SecY subunit
containing protein - Tetrahymena thermophila SB210
Length = 551
Score = 115 bits (277), Expect = 1e-24
Identities = 56/83 (67%), Positives = 65/83 (78%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
SS KDVAKQLKEQ M + G RD+ + L RYIP AA FGGLCIGALSV+ADF+G IGSG
Sbjct: 464 SSVKDVAKQLKEQGMGLVGSRDSGLKSHLKRYIPIAATFGGLCIGALSVVADFIGVIGSG 523
Query: 437 TGILLAVTIIYQYFEIFVKEQAE 505
TGILLAV I+Y YFE F +E+ +
Sbjct: 524 TGILLAVNIVYGYFEQFKREKEQ 546
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
NLY SQ+L F+GNF+V +LG W+ L YYLSPP + + DP+
Sbjct: 380 NLYFFSQILYRNFNGNFIVGLLGKWS-IPEAGGSHMVPVGGLVYYLSPPHGMIEVISDPL 438
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
H +LYV+F+L +CA FSKTWI VS K
Sbjct: 439 HTILYVVFILTTCALFSKTWIQVSGSSVK 467
>UniRef50_Q5KC69 Cluster: Protein transporter, putative; n=4;
Eukaryota|Rep: Protein transporter, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 478
Score = 111 bits (268), Expect = 1e-23
Identities = 52/82 (63%), Positives = 64/82 (78%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
S +DVAKQLK+Q M + GHRD S+ EL R IPTAAAFGG +G LSV+AD +GA+GSG
Sbjct: 385 SGPRDVAKQLKDQNMTLAGHRDASIYKELKRIIPTAAAFGGATLGLLSVVADMMGALGSG 444
Query: 437 TGILLAVTIIYQYFEIFVKEQA 502
TGIL+A TIIY YFE+ +KE +
Sbjct: 445 TGILMATTIIYGYFELGIKENS 466
Score = 81.0 bits (191), Expect = 3e-14
Identities = 36/89 (40%), Positives = 53/89 (59%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
N++++SQMLA +F N LV +LGVW + + YY+S P SL DP
Sbjct: 301 NVFLVSQMLAGRFPDNLLVRLLGVW-EPMENNPTQLGAVSGIAYYMSAPHSLTSALKDPF 359
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
H ++Y+ F++ +CA FSKTWI+VS P+
Sbjct: 360 HTVIYIAFIVTACALFSKTWIEVSGSGPR 388
>UniRef50_UPI0000499503 Cluster: Sec61 alpha subunit; n=3; Entamoeba
histolytica HM-1:IMSS|Rep: Sec61 alpha subunit -
Entamoeba histolytica HM-1:IMSS
Length = 447
Score = 93.5 bits (222), Expect = 5e-18
Identities = 47/81 (58%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDN-SMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGS 433
SS+ DV KQL +Q++ +RG RD S ++ L++YIP AA+FGG+CI LSV AD LGA+GS
Sbjct: 356 SSSADVKKQLADQRVSIRGFRDGESSVYLLDKYIPIAASFGGMCISLLSVGADLLGAVGS 415
Query: 434 GTGILLAVTIIYQYFEIFVKE 496
GTGILLA T I +Y F KE
Sbjct: 416 GTGILLAATTISEYANTFQKE 436
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
N+++ISQ+L +F NFL+N+ G W+ LCYYL+ P SL + +P+
Sbjct: 273 NIFIISQLLFKRFPTNFLINLFGSWS--AISSRGQMYPVGGLCYYLTAPNSLFELVQNPI 330
Query: 183 HALLYVLFMLGSCAFFSKTWIDVS 254
H ++ + + C FS+ WI VS
Sbjct: 331 HGVISIGLTVFMCTIFSREWIKVS 354
>UniRef50_A2DZB2 Cluster: Preprotein translocase, SecY subunit,
putative; n=5; Trichomonas vaginalis G3|Rep: Preprotein
translocase, SecY subunit, putative - Trichomonas
vaginalis G3
Length = 484
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/80 (53%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Frame = +2
Query: 269 DVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTG 442
DVA+ LK+Q + ++GHR++ E L+RYIPTAAA GG+ + LS +ADFL A GSGTG
Sbjct: 390 DVAEALKKQHLTLKGHREDQKRLEKTLSRYIPTAAALGGILVALLSFVADFLSAFGSGTG 449
Query: 443 ILLAVTIIYQYFEIFVKEQA 502
I+LAV+II Q+ KE A
Sbjct: 450 IILAVSIINQFTAELSKEMA 469
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +3
Query: 63 VLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTW 242
+ GVW L YYL+ P+S+ HDP+H ++Y++F L S F S +
Sbjct: 321 IFGVWRSHNGMSYDYSTPVSGLIYYLTAPQSIQQTIHDPLHTIIYLIFSLSSAGFISYYY 380
Query: 243 IDVSAPRP 266
+ S P
Sbjct: 381 LRFSNQAP 388
>UniRef50_A3C0K6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 215
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = +2
Query: 293 QQMVMRG--HRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTII 466
Q++ + G RD ++ L+RYI TAAA GGLC+GAL++LAD GAIGSGTGILLA T++
Sbjct: 145 QRLALHGARERDAALRSHLSRYISTAAALGGLCVGALTILADMTGAIGSGTGILLAATVV 204
Query: 467 YQYFEIFVKEQ 499
Y + F KE+
Sbjct: 205 YNLIDAFQKEE 215
>UniRef50_Q7QS32 Cluster: GLP_661_10951_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_661_10951_12423 - Giardia lamblia
ATCC 50803
Length = 490
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 AKDVAKQLKEQQMVMRGHRDNSMIH-ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGT 439
AK+VA+ L+ M G+ + ELNRYIPTAA GGL +G + AD GAIGSGT
Sbjct: 406 AKEVAEMLETNGWCMPGYMTKGALQRELNRYIPTAALAGGLILGFVGFCADIFGAIGSGT 465
Query: 440 GILLAVTIIYQYFEIFVKEQAEM 508
GILLA T + + +E F KE ++
Sbjct: 466 GILLAATTLVKMYEEFAKEGIQL 488
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
N+++ISQ + +F + +LG WA+ L + L+ P SL P+
Sbjct: 320 NVFMISQAIWRRFGNSIFTALLGTWAEVESRPGQAFPTGG-LAWILASPYSLRSALFHPI 378
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
H +L+ + ++ S+ W++ S K
Sbjct: 379 HTILHAVTLVALSGLISRVWVEFSGEGAK 407
>UniRef50_Q8SQQ4 Cluster: ER PROTEIN-TRANSLOCATION COMPLEX; n=2;
Apansporoblastina|Rep: ER PROTEIN-TRANSLOCATION COMPLEX
- Encephalitozoon cuniculi
Length = 410
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/82 (40%), Positives = 53/82 (64%)
Frame = +2
Query: 260 SAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGT 439
S + A++LKE +M ++G R+ + + L+RYIPTAA GG+ + ++++ IGSGT
Sbjct: 320 SPEKAAQKLKESRMRLKGVREANTANVLSRYIPTAAFLGGMLTSMVVIMSNLFDTIGSGT 379
Query: 440 GILLAVTIIYQYFEIFVKEQAE 505
I LA +I+ QY E+F KE +
Sbjct: 380 NIFLATSIVSQYLEMFAKESMQ 401
Score = 39.5 bits (88), Expect = 0.080
Identities = 21/85 (24%), Positives = 40/85 (47%)
Frame = +3
Query: 15 ISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPVHALL 194
IS L ++ +V +LGVW + YY++ PES+ DP+ ++
Sbjct: 241 ISSFLYKRWPQYLVVRILGVW---NTSKGGRYMPVSGVSYYITSPESIFEGFRDPLRFVI 297
Query: 195 YVLFMLGSCAFFSKTWIDVSAPRPK 269
Y+ M + A S +W++++ P+
Sbjct: 298 YLAIMFLTSAILSTSWLELNELSPE 322
>UniRef50_Q8U019 Cluster: Preprotein translocase subunit secY; n=4;
Thermococcaceae|Rep: Preprotein translocase subunit secY
- Pyrococcus furiosus
Length = 468
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 AKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
A+ +A+QL+ + + G R + E L RYIP +G L + ++VLADFLGA+G+G
Sbjct: 374 ARSIARQLQRAGLQIPGFRRDPRTLEKVLQRYIPYVTFWGSLTVALIAVLADFLGALGTG 433
Query: 437 TGILLAVTIIYQYFEIFVKEQ 499
TGILL V I+Y+++E +EQ
Sbjct: 434 TGILLTVGILYRFYEEIAREQ 454
>UniRef50_Q2QAQ7 Cluster: Preprotein translocase subunit SecY; n=2;
environmental samples|Rep: Preprotein translocase
subunit SecY - uncultured marine group II euryarchaeote
HF70_59C08
Length = 604
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Frame = +2
Query: 263 AKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIG-- 430
AKDVAKQ++ M + G R N + E L RYIP F G +G L+ AD LG +G
Sbjct: 507 AKDVAKQIENTGMQIPGFRKNPKVLERILMRYIPPVTLFSGAFVGLLAAGADLLGTVGNA 566
Query: 431 SGTGILLAVTIIYQYFEIFVKEQA 502
+GTG+LLAV II + +E KEQA
Sbjct: 567 TGTGLLLAVGIILRTYEQIQKEQA 590
>UniRef50_O28377 Cluster: Preprotein translocase subunit secY; n=44;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Archaeoglobus fulgidus
Length = 493
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = +2
Query: 263 AKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIG-- 430
A+ VA Q+ + M + G R + + E L+RYIP GG IG L+++A+ LG IG
Sbjct: 395 ARTVASQIAKSGMQVPGFRKSPQVLERVLSRYIPKVTILGGAIIGILTLVANMLGTIGNV 454
Query: 431 SGTGILLAVTIIYQYFEIFVKEQ 499
SGTG+LLAV+I Y+++E KEQ
Sbjct: 455 SGTGLLLAVSIAYRFYEDLAKEQ 477
>UniRef50_P28541 Cluster: Preprotein translocase subunit secY; n=10;
Euryarchaeota|Rep: Preprotein translocase subunit secY -
Methanococcus vannielii
Length = 438
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 AKDVAKQLKEQQMVMRGHRDN--SMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
AK +AK+L M ++G R + S+ L RYI G +G L+ ADF GA+G G
Sbjct: 343 AKSMAKKLGNLDMAIKGFRKSQKSIEQRLKRYIKPITVMGSAFVGFLAAAADFTGALGGG 402
Query: 437 TGILLAVTIIYQYFEIFVKEQ 499
TG+LL V+I+Y+ +E V+EQ
Sbjct: 403 TGVLLTVSIVYRLYEQLVQEQ 423
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 126 LCYYLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVS 254
+ YY S P +++I DP+HA+ Y L M+ C F W++ S
Sbjct: 297 IAYYFSTPYGISNIISDPLHAIFYTLMMVIFCILFGLFWVETS 339
>UniRef50_Q6C854 Cluster: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P78979 Yarrowia lipolytica
transport protein SEC61 alpha subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 485
Score = 66.9 bits (156), Expect = 5e-10
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIG-S 433
S+ KDVAKQ + Q +V+ G R S EL + IP AAA GG +GA+ D G +G S
Sbjct: 393 SAPKDVAKQFQAQSIVIVGQRAQSAPRELAKVIPVAAAVGGAVVGAIVAFCDIFGGLGAS 452
Query: 434 GTGILLAVTIIYQYFEIFVKE 496
+++AVT + YFEI +E
Sbjct: 453 AAPMIVAVTSMNNYFEILAQE 473
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/89 (30%), Positives = 42/89 (47%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
N+ + SQ L V+F N +V VLG W + YY+SP + +D +
Sbjct: 319 NVLIYSQSLYVQFPDNLMVQVLGSWG-------ADGSPVGGIAYYISPN----NFGYDVI 367
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
+LY ++ + C FSK W ++S PK
Sbjct: 368 KMVLYSVYTIVGCTLFSKYWAEISGSAPK 396
>UniRef50_Q2FSG8 Cluster: Preprotein translocase secY subunit; n=4;
Methanomicrobiales|Rep: Preprotein translocase secY
subunit - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 479
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Frame = +2
Query: 263 AKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIG-- 430
+K VA+Q++ M + G+R N + E L+RYIP GG+ IG +SV+A+ G IG
Sbjct: 382 SKAVARQIQLSGMSIPGYRRNPAVLEKVLDRYIPRVTVIGGVFIGIMSVVANLFGVIGAV 441
Query: 431 SGTGILLAVTIIYQYFEIFVKEQ 499
SGTG+LL V+I Y+ +E EQ
Sbjct: 442 SGTGLLLTVSITYRLYEQIASEQ 464
>UniRef50_A3GFV9 Cluster: Protein involved in co-translational
pathway of protein transport; n=6;
Saccharomycetales|Rep: Protein involved in
co-translational pathway of protein transport - Pichia
stipitis (Yeast)
Length = 501
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
S+ KD++KQ K+Q + + G RD S+ EL+R IP AA GG + A++V D LG +G
Sbjct: 402 SAPKDISKQFKDQGISISGKRDISITKELSRVIPVAAVSGGFILAAIAVAGDLLGGLGKS 461
Query: 437 TGILLAVTIIYQYFEIFVKE 496
++ V+ + E F+ E
Sbjct: 462 AATIVGVSAAFSVLEEFMVE 481
>UniRef50_A6UWW1 Cluster: Preprotein translocase, SecY subunit; n=2;
Methanococcus|Rep: Preprotein translocase, SecY subunit
- Methanococcus aeolicus Nankai-3
Length = 443
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 AKDVAKQLKEQQMVMRGHR--DNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
AK +AK++ M ++G R + S+ + L RYI +G L+ ADF+GA+G G
Sbjct: 349 AKSMAKKMGSMNMAIKGFRKSNKSIENRLKRYILPITVMSSAFVGLLASGADFMGALGGG 408
Query: 437 TGILLAVTIIYQYFEIFVKEQ 499
TG+LL V+I+Y+ +E V+EQ
Sbjct: 409 TGVLLTVSIVYRMYEQLVQEQ 429
Score = 39.9 bits (89), Expect = 0.060
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 126 LCYYLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVS 254
+ YY + P L + DP+ A++Y + M+ C F W++ S
Sbjct: 303 IAYYFATPYGLTSVLADPIRAIIYTILMIIFCIIFGMFWVETS 345
>UniRef50_A0RUE4 Cluster: Preprotein translocase secY subunit; n=2;
Thermoprotei|Rep: Preprotein translocase secY subunit -
Cenarchaeum symbiosum
Length = 478
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 SAKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGS 433
S K AK L + + + G R ++ E LN+YIP+ G + +GAL+ +D LG GS
Sbjct: 382 SPKSAAKNLLDADVQIPGFRRSNQPIEVLLNKYIPSVTIIGSMILGALAGASDVLGVFGS 441
Query: 434 GTGILLAVTIIYQYFEIFVKEQAEM 508
G GILL V I+ Y+ V+EQ E+
Sbjct: 442 GIGILLMVDILINYYNQLVREQVEV 466
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 126 LCYYLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
+ YY++PP L A DP+ A+ YVLFM+G F K W+++ PK
Sbjct: 337 IVYYITPPRGLDIAALDPMRAVGYVLFMIGIVVVFGKLWVELGGLSPK 384
>UniRef50_Q6L1A4 Cluster: Preprotein translocase secY subunit; n=5;
Thermoplasmatales|Rep: Preprotein translocase secY
subunit - Picrophilus torridus
Length = 587
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Frame = +2
Query: 272 VAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIG--SGT 439
VAKQ++ M + G R + + E L++YIP F G +G L+ AD +G +G SGT
Sbjct: 493 VAKQIQSSGMQIPGFRRDPRVMERVLSKYIPAITVFSGAVVGLLAAAADLIGTVGDTSGT 552
Query: 440 GILLAVTIIYQYFEIFVKEQ 499
G+LLAV I+ Q++E +EQ
Sbjct: 553 GLLLAVGIVIQFYEAMGREQ 572
>UniRef50_Q0J0G0 Cluster: Os09g0512000 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0512000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 466
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/75 (42%), Positives = 40/75 (53%)
Frame = +3
Query: 9 YVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPVHA 188
YV S++L K+SGN LVN+LG W + YYL P LA + DP HA
Sbjct: 297 YVASKVLYKKYSGNTLVNLLGKW--DGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHA 354
Query: 189 LLYVLFMLGSCAFFS 233
+YV F+L SC F S
Sbjct: 355 FIYVAFVLISCVFIS 369
Score = 59.7 bits (138), Expect = 7e-08
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +2
Query: 230 FKDLDRCVCSSAKDVAK-----QLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGA 394
F + VC+S+K V ++E++ + D+ +E+ R++ AA GG C G
Sbjct: 367 FISMGLMVCASSKGVFNGFVVLNMQEERRLRLAQPDSIHANEIRRHVMRAACVGGFCAGV 426
Query: 395 LSVLADFLGAIGSGTGILLAVTIIYQYFE 481
L + AD +G SGTGI+LAVT Y Y +
Sbjct: 427 LIIFADLIGVFCSGTGIMLAVTASYPYVD 455
>UniRef50_A0B9U7 Cluster: Preprotein translocase, SecY subunit; n=6;
Euryarchaeota|Rep: Preprotein translocase, SecY subunit
- Methanosaeta thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 537
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +2
Query: 263 AKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIG-- 430
AK +A ++ + + G+R + + E + RYIP GG IG L+V+A LG +G
Sbjct: 439 AKSIAAKIHASGLQIPGYRRSPVSIERLMERYIPKVTVIGGAIIGLLTVIASLLGTLGGA 498
Query: 431 SGTGILLAVTIIYQYFEIFVKEQAE 505
GTG+LLAV+I+Y+ +E EQ +
Sbjct: 499 GGTGLLLAVSIMYRLYEQIASEQIQ 523
>UniRef50_Q9UX84 Cluster: Preprotein translocase subunit secY; n=4;
Sulfolobaceae|Rep: Preprotein translocase subunit secY -
Sulfolobus solfataricus
Length = 469
Score = 59.7 bits (138), Expect = 7e-08
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +2
Query: 275 AKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGIL 448
A+QL E + + G R+N I E L RYI A F + +G ++V A LGA G+G GIL
Sbjct: 379 AQQLVEAGIEIPGVRNNPKIIEGILARYIYPLAFFSSIIVGLIAVFATLLGAYGTGIGIL 438
Query: 449 LAVTIIYQYFEIFVKEQA 502
LAVTI QY+ + E++
Sbjct: 439 LAVTIAIQYYSLLAYERS 456
>UniRef50_A3DND0 Cluster: Preprotein translocase, SecY subunit; n=1;
Staphylothermus marinus F1|Rep: Preprotein translocase,
SecY subunit - Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1)
Length = 476
Score = 56.4 bits (130), Expect = 7e-07
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 SAKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGS 433
SA A++L + M + G R N I E L+RYI L + ++V AD +GA G+
Sbjct: 381 SASAQAEELIKSGMEIPGIRRNPKILERILSRYIFPLTVLSSLIVALIAVTADLMGAYGT 440
Query: 434 GTGILLAVTIIYQYFEIFVKEQ 499
GTGILLAV I+ QY+ + E+
Sbjct: 441 GTGILLAVGIVQQYYTMIAYER 462
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 FLVNVLGVW-ADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPVHALLYVLFMLGSCAF 227
+L N++ W A+ L YYLSPP SLA +DP+ A++Y + +L
Sbjct: 310 YLQNIVPDWVANMLATYDANGRLTGGLAYYLSPPGSLARTLYDPMQAVIYAVSVLFLATL 369
Query: 228 FSKTWIDVS 254
F W+++S
Sbjct: 370 FGIMWVEIS 378
>UniRef50_P38353 Cluster: Sec sixty-one protein homolog; n=7;
Saccharomycetales|Rep: Sec sixty-one protein homolog -
Saccharomyces cerevisiae (Baker's yeast)
Length = 490
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
SSA+DVA + K+Q + + G R+ ++ ELN+ IP AA G + ++V+ + LG G
Sbjct: 391 SSARDVALEFKDQGITLMGRREQNVAKELNKVIPIAAVTGASVLSLITVIGESLGLKGKA 450
Query: 437 TGILLAVTIIYQYFEIFVKE 496
GI++ + + E+ E
Sbjct: 451 AGIVVGIAGGFSLLEVITIE 470
>UniRef50_Q9YDD0 Cluster: Preprotein translocase subunit secY; n=1;
Aeropyrum pernix|Rep: Preprotein translocase subunit
secY - Aeropyrum pernix
Length = 457
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +2
Query: 266 KDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGSGT 439
++ A++L + + + G R + + E L RYI L + AL ++AD GA G+GT
Sbjct: 361 REQAERLIKGGLAIPGMRSDPRVLERVLRRYIYPLTFLSSLIVAALVIVADIFGAYGTGT 420
Query: 440 GILLAVTIIYQYFEIFVKEQA 502
G+LLAV II QY+ + +E+A
Sbjct: 421 GLLLAVGIINQYYAMITRERA 441
Score = 32.7 bits (71), Expect = 9.2
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 126 LCYYLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
+ YYLSPP + DPV +++ F W++++ P+
Sbjct: 314 IVYYLSPPRGVVQSIADPVKTAVFIASWTVLSIVFGYMWVEIAGLNPR 361
>UniRef50_O42965 Cluster: Uncharacterized protein C19G7.17; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C19G7.17 - Schizosaccharomyces pombe (Fission yeast)
Length = 475
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +2
Query: 266 KDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGI 445
+DV KE Q+V+ G+R+ +M+ EL + IP AA + LSV+A A G G+
Sbjct: 392 RDVLLFFKENQLVIAGYREATMLKELEKIIPIAAKLSAFFVSILSVIAGIF-ASTFGVGV 450
Query: 446 LLAVTIIYQYFEIFV 490
L+A ++Y FE+ V
Sbjct: 451 LIASALVYASFEMIV 465
Score = 37.9 bits (84), Expect = 0.24
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 126 LCYYLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
L Y+L PP L+ PVH ++Y + ++ +FS W++ +A P+
Sbjct: 345 LVYFLYPPLGLSEALLHPVHTVIYTITLICITIYFSLLWMNATAGGPR 392
>UniRef50_A3H5A9 Cluster: Preprotein translocase secY subunit; n=1;
Caldivirga maquilingensis IC-167|Rep: Preprotein
translocase secY subunit - Caldivirga maquilingensis
IC-167
Length = 482
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 SAKDVAKQLKEQQMVMRGHRDN--SMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGS 433
SA+D A+ + + + G R + S+ L RY+ + GL G ++ L D LG G+
Sbjct: 386 SAEDQARTMVSSGLSIPGFRASARSLAVHLKRYVNSLTFTSGLLAGFIAALGDVLGVYGT 445
Query: 434 GTGILLAVTIIYQYFEIFVKEQ 499
G G++L V II QY+ I ++EQ
Sbjct: 446 GIGLILMVEIIIQYYTIAMQEQ 467
>UniRef50_A1RWR3 Cluster: Preprotein translocase, SecY subunit; n=1;
Thermofilum pendens Hrk 5|Rep: Preprotein translocase,
SecY subunit - Thermofilum pendens (strain Hrk 5)
Length = 476
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +2
Query: 275 AKQLKEQQMVMRGHRDNSMI--HELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGIL 448
A+QL + Q+ + G R + + L RYI + IG ++V++D +G GTGIL
Sbjct: 386 AEQLAKAQLQIPGFRKSEKVIASMLKRYIWGLTILSSIIIGVIAVVSDIFRVMGGGTGIL 445
Query: 449 LAVTIIYQYFEIFVKEQA 502
L V II QY+ I E+A
Sbjct: 446 LLVGIIVQYYSILASERA 463
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +3
Query: 132 YYLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
YY+SPP SLA DPVH ++Y L +G F WI S P+
Sbjct: 338 YYISPPRSLASALADPVHLVVYSLLYIGFAVLFGVAWILTSGMDPE 383
>UniRef50_Q8ZT51 Cluster: Preprotein translocase secY subunit; n=4;
Pyrobaculum|Rep: Preprotein translocase secY subunit -
Pyrobaculum aerophilum
Length = 459
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 SAKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGS 433
SA+D A+Q Q+ + G R + I L R I G G+ + L + LG G
Sbjct: 365 SAEDQARQFARSQLHVPGFRQSEKILAKILERPINALTIISGFIAGSFAALGNILGVWGG 424
Query: 434 GTGILLAVTIIYQYFEIFVKEQ 499
GTG++L V I QY+ + ++EQ
Sbjct: 425 GTGLILLVEIALQYYALVMREQ 446
>UniRef50_A2BME2 Cluster: Preprotein translocase subunit secY; n=1;
Hyperthermus butylicus DSM 5456|Rep: Preprotein
translocase subunit secY - Hyperthermus butylicus
(strain DSM 5456 / JCM 9403)
Length = 464
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 SAKDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGS 433
S + A+ L + M + G R N + E L RYI L + +++LAD GA G+
Sbjct: 369 SPRQQAENLIKSGMELPGIRKNVKLLERILARYIYPLTVISSLLVTTMAILADVFGAYGT 428
Query: 434 GTGILLAVTIIYQYFEIFVKEQ 499
G+G++L V IIY +++ V E+
Sbjct: 429 GSGLVLLVGIIYNFYQALVYER 450
>UniRef50_A0BY98 Cluster: Chromosome undetermined scaffold_136,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_136,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 366
Score = 50.0 bits (114), Expect = 6e-05
Identities = 36/81 (44%), Positives = 43/81 (53%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
SS +VAKQLKEQ M + G+RD+SM L + L + L AIGSG
Sbjct: 291 SSPNEVAKQLKEQDMKIVGYRDSSMKDVLYDIFQSL----------LPSVECALEAIGSG 340
Query: 437 TGILLAVTIIYQYFEIFVKEQ 499
T ILL VTIIY Y E K +
Sbjct: 341 TNILLQVTIIYGYIETLKKRK 361
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +3
Query: 174 DPVHALLYVLFMLGSCAFFSKTWIDVSAPRP 266
DP++ +LY F+ G CA SKTWIDVS P
Sbjct: 263 DPINKVLYTAFIHGICAVLSKTWIDVSGSSP 293
>UniRef50_A2ZMY6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 384
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 281 QLKEQQMVMRGHRDNSMIHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 457
++ +Q++ D S+ R+ T AA+ G+C+G L++LA F+G GSG I+LAV
Sbjct: 305 RVSPEQLLQEHDEDESISPRRCRHYMTMAAYIVGICVGLLNLLAGFMGLGGSGPAIMLAV 364
Query: 458 TIIYQYFE 481
T+I+ E
Sbjct: 365 TVIHNLVE 372
>UniRef50_UPI00015BB126 Cluster: protein translocase subunit
secY/sec61 alpha; n=1; Ignicoccus hospitalis KIN4/I|Rep:
protein translocase subunit secY/sec61 alpha -
Ignicoccus hospitalis KIN4/I
Length = 479
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 266 KDVAKQLKEQQMVMRGHRDNSMIHE--LNRYIPTAAAFGGLCIGALSVLADFLGAIGSGT 439
K A+ L E + + G R + E L +YI + + L ++AD GA G+GT
Sbjct: 386 KTQARNLIESGLHVPGARSDPRHLEKILAKYIYPLTILSSIIVALLVIVADIFGAYGTGT 445
Query: 440 GILLAVTIIYQYFEIFVKEQA 502
G+LLA I+ QY+ + E+A
Sbjct: 446 GLLLATMILQQYYTMLTYERA 466
Score = 35.5 bits (78), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 126 LCYYLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
+ YYL+PP L H+P+ Y + + F W++++ PK
Sbjct: 339 VAYYLTPPRGLLAFIHEPLRMFTYGIALTALSVAFGYLWVELAGLDPK 386
>UniRef50_Q7QS31 Cluster: GLP_661_12509_12237; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_661_12509_12237 - Giardia lamblia
ATCC 50803
Length = 90
Score = 46.4 bits (105), Expect = 7e-04
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -3
Query: 495 SLTKISKYW*MMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAAVGM*RFSS 337
SL S + +V AS +PVP+P+AP+ SA P PP AAVGM FSS
Sbjct: 37 SLANSSYIFTRVVAASKMPVPDPIAPKMSAQNPTNPSIRPPARAAVGMYLFSS 89
>UniRef50_A7QN16 Cluster: Chromosome undetermined scaffold_129,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_129, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 116
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 126 LCYYLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDV 251
L Y++ L +A +P HA Y+LFM +C F KTWI+V
Sbjct: 61 LASYITALSCLVDMAANPFHAFFYILFMFAACTLFEKTWIEV 102
>UniRef50_A2ZMZ3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 546
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +2
Query: 338 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIY 469
+ RY+ AA F G C+G LS+LA FLG G I+LAVT+I+
Sbjct: 372 QCRRYMTIAAIFVGFCVGFLSLLAGFLGL--DGPAIMLAVTVIH 413
Score = 43.2 bits (97), Expect = 0.006
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +3
Query: 6 LYVISQMLAVKFSG-NFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
L ISQ L++K+ N +VN+LG W Y +PP + DP
Sbjct: 252 LVSISQTLSIKYGETNRVVNLLGKWQQMCKYPGYYVPVARIASYVTTPPSFGEIVTGDP- 310
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPKMW 275
+LLY +F+L CAF S V A K +
Sbjct: 311 GSLLYAVFLLTGCAFLSLFCFKVCAKSSKRY 341
>UniRef50_Q74NB9 Cluster: NEQ168; n=1; Nanoarchaeum equitans|Rep:
NEQ168 - Nanoarchaeum equitans
Length = 476
Score = 41.1 bits (92), Expect = 0.026
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 263 AKDVAKQLKEQQMVMRGHRDNSMI-HELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGT 439
++ +AKQL + + RD +I H L++ IP GG +G L++L+ ++ GT
Sbjct: 384 SEGLAKQLSKMFGRIGLKRDYRIIKHYLDKIIPCVTVLGGFIVGFLALLSYWVSIPIGGT 443
Query: 440 GILLAVTIIYQYFE 481
ILLA I Y +E
Sbjct: 444 SILLATMISYMVYE 457
>UniRef50_Q2QM98 Cluster: Preprotein translocase, SecY subunit
containing protein; n=3; Oryza sativa|Rep: Preprotein
translocase, SecY subunit containing protein - Oryza
sativa subsp. japonica (Rice)
Length = 461
Score = 40.3 bits (90), Expect = 0.046
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 341 LNRYIPTAAAFGGLCIGALSVLADFLGAIG-SGTGILLAVTIIYQYFEIF 487
++R I AAA GG +G L+V A +GAIG +G +L AV +I E F
Sbjct: 401 IDRVIAAAAAVGGFAVGGLAVYAGAVGAIGEAGPELLFAVLVIKNLAETF 450
>UniRef50_A5C0J8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 371
Score = 37.1 bits (82), Expect = 0.43
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = +2
Query: 287 KEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAV 457
KEQQ+VM G + +L + A + I AL L + + AIGSG GILLAV
Sbjct: 309 KEQQIVMTGDQVEDSQKDLIYSLKVAGFVRNMYIVALIGLVEPMEAIGSGAGILLAV 365
>UniRef50_Q2HBA1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 550
Score = 37.1 bits (82), Expect = 0.43
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 277 ETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHR 390
E G D+RSP+QL+D R P++P+ R+ R V R
Sbjct: 19 EVVPGEGPEDSRSPQQLYDERGRPINPETKRINRDVIR 56
>UniRef50_A6QYP0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 367
Score = 36.7 bits (81), Expect = 0.56
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +1
Query: 271 CGETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRL---PRGHRLRHW 441
C E+ G + PR P T P HPD T S+S R P+GH+ +
Sbjct: 250 CPESDAGDESPTHKPPRARTQPVTRPYHPDADASETTKKADSLSHFRQESEPKGHKEQKN 309
Query: 442 DTARRHHHL---PVLRDLCQGTSGDGGM 516
T H HL P+ L +G + D +
Sbjct: 310 LTVDFHSHLTHNPLTSSLPKGETADSAL 337
>UniRef50_Q9C2B1 Cluster: Putative uncharacterized protein
B11N2.170; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein B11N2.170 - Neurospora crassa
Length = 599
Score = 34.7 bits (76), Expect = 2.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 277 ETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHR 390
E EGT + +P QL+D R P++P+ R+ R + R
Sbjct: 18 EVVEGTGEPQPGAPEQLYDDRGRPVNPETRRINRDIIR 55
>UniRef50_A0TSH0 Cluster: LigA; n=1; Burkholderia cenocepacia
MC0-3|Rep: LigA - Burkholderia cenocepacia MC0-3
Length = 1009
Score = 34.3 bits (75), Expect = 3.0
Identities = 25/72 (34%), Positives = 32/72 (44%)
Frame = +1
Query: 289 GTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLRHWDTARRHHHL 468
G A + S +LHD E P G RR+V G++ A R PR RH RH L
Sbjct: 4 GFAGDNEVSKGELHDGDVEYQQPAGRDRRRSVDAGALGAARQPRAD--RH-QVRLRHRRL 60
Query: 469 PVLRDLCQGTSG 504
L C+ +G
Sbjct: 61 RRLHRSCRRPAG 72
>UniRef50_A6SX11 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 517
Score = 33.9 bits (74), Expect = 4.0
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 251 VCSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFL-GAI 427
V ++A AK L Q + +G N ++H L P A+ G CI ++L L GA+
Sbjct: 395 VMATAGTSAKVLGTQALAHKGVYYNGLLH-LGSGAPLASMLWG-CIAIFAILNHPLRGAV 452
Query: 428 GSGTGILLAV 457
+GTG LLA+
Sbjct: 453 AAGTGALLAL 462
>UniRef50_UPI0000DD833C Cluster: PREDICTED: hypothetical protein;
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 369
Score = 33.5 bits (73), Expect = 5.2
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 262 GQRCGETTEG-TADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLRH 438
G+R EG T+ GDAR+ QL R R R + G V AG+ P G
Sbjct: 263 GRRGPVHPEGATSSGDARAQGQLSRLRNSECPRHRSRTRLCIPPGPVHAGKAPAG--CGR 320
Query: 439 WDTARRHHHLPV 474
W ++R H P+
Sbjct: 321 WASSRDPHSTPL 332
>UniRef50_A4MGD6 Cluster: YaeQ protein family; n=2; Burkholderia
pseudomallei|Rep: YaeQ protein family - Burkholderia
pseudomallei 305
Length = 127
Score = 33.5 bits (73), Expect = 5.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 307 ARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLR 435
A +PR L PR P+ P GGR + G+++ RL R R
Sbjct: 6 AHAPRILDAPRNRPIQPSGGRFGKRAIDGAIAHRRLRRAASCR 48
>UniRef50_Q6Z0Y6 Cluster: Putative uncharacterized protein
OSJNBa0081C13.15; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0081C13.15 - Oryza sativa subsp. japonica (Rice)
Length = 225
Score = 33.5 bits (73), Expect = 5.2
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 298 DGDARSPRQLHDPRTEPLHPDGGRVR---RTVHRGSVSAGRLPRGHRLRHWDTARRHHHL 468
DGD + R H G R R R RG + GR RG RL+ + R H +
Sbjct: 135 DGDGTAGR--HTGEAAEAAGGGRRHRIETRATGRGGAATGR--RGRRLKRENGGRGFHFI 190
Query: 469 PVLRDLCQGTSGDGG 513
RDL G +G+GG
Sbjct: 191 GEGRDLATGGAGNGG 205
>UniRef50_Q4Q8V2 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 927
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 449 AVSQCRSRWPRGSRPALTEPRCTVLRTRPPSGCSG 345
++ Q SR+ RG+ P+L RC PPS C G
Sbjct: 107 SLPQSFSRYERGAAPSLPRTRCATSLPLPPSACGG 141
>UniRef50_Q0S5C7 Cluster: Putative uncharacterized protein; n=1;
Rhodococcus sp. RHA1|Rep: Putative uncharacterized
protein - Rhodococcus sp. (strain RHA1)
Length = 233
Score = 33.1 bits (72), Expect = 6.9
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 251 VCSSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIG 430
V SS K VA+ + Q RD+S + + N Y+ A GGL G + GA+G
Sbjct: 117 VASSLKSVAQDGFDTQE----ERDDSALADFNSYLGYATLIGGLIFGVI------FGAVG 166
Query: 431 SGTGI-LLAVTII 466
G L AVT+I
Sbjct: 167 LAVGCGLFAVTVI 179
>UniRef50_A4JRR1 Cluster: Putative uncharacterized protein; n=1;
Burkholderia vietnamiensis G4|Rep: Putative
uncharacterized protein - Burkholderia vietnamiensis
(strain G4 / LMG 22486) (Burkholderiacepacia (strain
R1808))
Length = 236
Score = 32.7 bits (71), Expect = 9.2
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = -3
Query: 522 DAHAAISACSLTKISKYW*MMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAAVGM 352
++ A ++ SLTK W ++V SSIP PEP R SA+ R H P+AA VG+
Sbjct: 17 ESGAGVAMPSLTKAG--W-ILVPPSSIPNPEPSISR-SAAQRRHSEHD-PDAACVGL 68
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,184,616
Number of Sequences: 1657284
Number of extensions: 11729450
Number of successful extensions: 43132
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 40626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43083
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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