Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30918
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   3.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   3.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   3.2  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   4.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.9  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 398 TEPRCTVLRTRPPSGCSGSV 339
           T+P C  L T+PP   S ++
Sbjct: 109 TQPMCESLNTQPPVTSSSNI 128


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 398 TEPRCTVLRTRPPSGCSGSV 339
           T+P C  L T+PP   S ++
Sbjct: 109 TQPMCESLNTQPPVTSSSNI 128


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 398 TEPRCTVLRTRPPSGCSGSV 339
           T+P C  L T+PP   S ++
Sbjct: 109 TQPMCESLNTQPPVTSSSNI 128


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 634 YLVSVGCEYIVGTF 675
           Y V  GC  ++GTF
Sbjct: 80  YTVPAGCTVVIGTF 93


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = +3

Query: 177 PVHALLYVLFMLGSCAFFSKTWIDVSAPRPKM 272
           P++   Y++ +    A+   TWI     + K+
Sbjct: 72  PIYKNTYLIILFADFAYLETTWICTLLKKDKL 103


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = +3

Query: 177 PVHALLYVLFMLGSCAFFSKTWIDVSAPRPKM 272
           P++   Y++ +    A+   TWI     + K+
Sbjct: 90  PIYKNTYLIILFADFAYLETTWICTLLKKDKL 121


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 393 APMHSPP 373
           APMHSPP
Sbjct: 195 APMHSPP 201


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 423 APRKSASTDRAPMHSPPNAAA 361
           +P   AS   AP+H P   AA
Sbjct: 43  SPASVASNASAPLHIPAKRAA 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,302
Number of Sequences: 336
Number of extensions: 2878
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)