Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30918
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640... 144 8e-35
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544... 144 8e-35
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586... 144 8e-35
09_04_0707 + 19645471-19646112 98 5e-21
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 60 2e-09
12_02_1185 + 26786543-26786545,26786676-26786686,26787032-267872... 49 3e-06
12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091... 44 1e-04
12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388 40 0.001
02_01_0286 + 1921049-1921726 33 0.17
01_05_0278 - 20313373-20313387,20314617-20315240 31 0.90
04_01_0122 + 1267048-1267149,1267764-1267855,1268137-1268234,126... 30 1.6
02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356 30 1.6
02_02_0449 - 10377835-10377876,10377977-10378117,10378230-103783... 30 1.6
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 29 2.8
08_01_0259 + 2123393-2123555,2123670-2124070 29 3.6
02_05_0593 - 30217432-30218232 29 3.6
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 29 3.6
10_01_0022 + 295760-295830,296885-296918,297042-297097,297292-29... 28 6.4
04_04_0869 - 28883688-28884983 28 6.4
02_03_0182 + 16101861-16101955,16102226-16102372,16102465-161025... 28 6.4
01_06_1229 + 35551522-35552169 28 6.4
10_01_0146 - 1719997-1720386,1721498-1721515 28 8.4
09_04_0514 - 18236061-18237392 28 8.4
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 28 8.4
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101... 28 8.4
02_03_0085 + 15063444-15063889,15064324-15065311 28 8.4
02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810 28 8.4
>09_02_0577 -
10862976-10863215,10863653-10863788,10863906-10864030,
10864132-10864516,10864571-10864798,10864976-10865319
Length = 485
Score = 144 bits (348), Expect = 8e-35
Identities = 69/82 (84%), Positives = 77/82 (93%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
SSAKDVAKQLKEQQMVM GHR++++ ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSG
Sbjct: 396 SSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSG 455
Query: 437 TGILLAVTIIYQYFEIFVKEQA 502
TGILLAVTIIYQYFE F KE+A
Sbjct: 456 TGILLAVTIIYQYFETFEKERA 477
Score = 90.6 bits (215), Expect = 1e-18
Identities = 44/89 (49%), Positives = 56/89 (62%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
NLY ISQ+L ++SGNFLVN+LG W + L YY++ P SLA + +P
Sbjct: 313 NLYFISQLLYRRYSGNFLVNLLGKWKESEYSGHSVPVGG--LAYYVTAPSSLADVLANPF 370
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
HAL YV+FML +CA FSKTWI+VS K
Sbjct: 371 HALFYVVFMLSACALFSKTWIEVSGSSAK 399
>09_02_0576 -
10853361-10853600,10854033-10854168,10854285-10854409,
10854487-10854871,10854934-10855161,10855332-10855675
Length = 485
Score = 144 bits (348), Expect = 8e-35
Identities = 69/82 (84%), Positives = 77/82 (93%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
SSAKDVAKQLKEQQMVM GHR++++ ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSG
Sbjct: 396 SSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSG 455
Query: 437 TGILLAVTIIYQYFEIFVKEQA 502
TGILLAVTIIYQYFE F KE+A
Sbjct: 456 TGILLAVTIIYQYFETFEKERA 477
Score = 90.6 bits (215), Expect = 1e-18
Identities = 44/89 (49%), Positives = 56/89 (62%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
NLY ISQ+L ++SGNFLVN+LG W + L YY++ P SLA + +P
Sbjct: 313 NLYFISQLLYRRYSGNFLVNLLGKWKESEYSGHSVPVGG--LAYYVTAPSSLADVLANPF 370
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
HAL YV+FML +CA FSKTWI+VS K
Sbjct: 371 HALFYVVFMLSACALFSKTWIEVSGSSAK 399
>03_02_0140 +
5864612-5864955,5865154-5865381,5865460-5865814,
5865899-5866023,5866150-5866285,5866382-5866621
Length = 475
Score = 144 bits (348), Expect = 8e-35
Identities = 69/82 (84%), Positives = 77/82 (93%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSG 436
SSAKDVAKQLKEQQMVM GHR++++ ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSG
Sbjct: 386 SSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSG 445
Query: 437 TGILLAVTIIYQYFEIFVKEQA 502
TGILLAVTIIYQYFE F KE+A
Sbjct: 446 TGILLAVTIIYQYFETFEKERA 467
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/89 (48%), Positives = 56/89 (62%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
NLY ISQ+L ++SGNFLVN++G W + L YY++ P SLA + +P
Sbjct: 303 NLYFISQLLYRRYSGNFLVNLIGKWKESEYSGHSVPVGG--LAYYVTAPSSLADVLANPF 360
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPK 269
HAL YV+FML +CA FSKTWI+VS K
Sbjct: 361 HALFYVVFMLSACALFSKTWIEVSGSSAK 389
>09_04_0707 + 19645471-19646112
Length = 213
Score = 98.3 bits (234), Expect = 5e-21
Identities = 47/83 (56%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Frame = +2
Query: 257 SSAKDVAKQLKEQQMVMRG--HRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIG 430
SSA+DVA+QL Q++ + G RD ++ L+RYI TAAA GGLC+GAL++LAD GAIG
Sbjct: 131 SSAQDVARQLSVQRLALHGARERDAALRSHLSRYISTAAALGGLCVGALTILADMTGAIG 190
Query: 431 SGTGILLAVTIIYQYFEIFVKEQ 499
SGTGILLA T++Y + F KE+
Sbjct: 191 SGTGILLAATVVYNLIDAFQKEE 213
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +3
Query: 3 NLYVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
+LY +SQ+L F ++LG W + YY++PP L+H A
Sbjct: 58 SLYTVSQLLHYS---RFAGSLLGTWKKTGYAAIPVPVGG--VAYYVTPPAGLSHAA---- 108
Query: 183 HALLYVLFMLGSCAFFSKTWIDVS 254
Y +L SC FS W++VS
Sbjct: 109 ---AYAASLLASCTLFSGAWVEVS 129
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/75 (42%), Positives = 40/75 (53%)
Frame = +3
Query: 9 YVISQMLAVKFSGNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPVHA 188
YV S++L K+SGN LVN+LG W + YYL P LA + DP HA
Sbjct: 297 YVASKVLYKKYSGNTLVNLLGKW--DGLNHFGQSIPVGGIVYYLRTPPILADLHRDPFHA 354
Query: 189 LLYVLFMLGSCAFFS 233
+YV F+L SC F S
Sbjct: 355 FIYVAFVLISCVFIS 369
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +2
Query: 284 LKEQQMVMRGHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTI 463
++E++ + D+ +E+ R++ AA GG C G L + AD +G SGTGI+LAVT
Sbjct: 374 MQEERRLRLAQPDSIHANEIRRHVMRAACVGGFCAGVLIIFADLIGVFCSGTGIMLAVTA 433
Query: 464 IYQYFE 481
Y Y +
Sbjct: 434 SYPYVD 439
>12_02_1185 +
26786543-26786545,26786676-26786686,26787032-26787262,
26787892-26788012,26788263-26788393,26788718-26788760,
26788963-26789220
Length = 265
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 281 QLKEQQMVMRGHRDNSMIHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 457
++ +Q++ D S+ R+ T AA+ G+C+G L++LA F+G GSG I+LAV
Sbjct: 186 RVSPEQLLQEHDEDESISPRRCRHYMTMAAYIVGICVGLLNLLAGFMGLGGSGPAIMLAV 245
Query: 458 TIIYQYFE 481
T+I+ E
Sbjct: 246 TVIHNLVE 253
>12_02_1195 +
26906814-26907121,26907771-26907992,26908913-26909153,
26909512-26909642,26910336-26910474,26910600-26910810,
26911371-26911759
Length = 546
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +2
Query: 338 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIY 469
+ RY+ AA F G C+G LS+LA FLG G I+LAVT+I+
Sbjct: 372 QCRRYMTIAAIFVGFCVGFLSLLAGFLGL--DGPAIMLAVTVIH 413
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +3
Query: 6 LYVISQMLAVKFSG-NFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPV 182
L ISQ L++K+ N +VN+LG W Y +PP + DP
Sbjct: 252 LVSISQTLSIKYGETNRVVNLLGKWQQMCKYPGYYVPVARIASYVTTPPSFGEIVTGDP- 310
Query: 183 HALLYVLFMLGSCAFFSKTWIDVSAPRPKMW 275
+LLY +F+L CAF S V A K +
Sbjct: 311 GSLLYAVFLLTGCAFLSLFCFKVCAKSSKRY 341
>12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388
Length = 483
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 341 LNRYIPTAAAFGGLCIGALSVLADFLGAIG-SGTGILLAVTIIYQYFEIF 487
++R I AAA GG +G L+V A +GAIG +G +L AV +I E F
Sbjct: 423 IDRVIAAAAAVGGFAVGGLAVYAGAVGAIGEAGPELLFAVLVIKNLAETF 472
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 45 GNFLVNVLGVWADXXXXXXXXXXXXXXLCYYLSPPESLAHIAHDPVHALL-YVLFMLGSC 221
G F+VN+LG W D L YY++PP L + +H LL + +F++ SC
Sbjct: 331 GGFVVNLLGRWKD---AGGGAAYPVGGLVYYVTPPSKLL-VDPGLIHELLIHSVFVVASC 386
Query: 222 AFFSKTWIDVS 254
S W + S
Sbjct: 387 TLLSMAWAEAS 397
>02_01_0286 + 1921049-1921726
Length = 225
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 298 DGDARSPRQLHDPRTEPLHPDGGRVR---RTVHRGSVSAGRLPRGHRLRHWDTARRHHHL 468
DGD + R H G R R R RG + GR RG RL+ + R H +
Sbjct: 135 DGDGTAGR--HTGEAAEAAGGGRRHRIETRATGRGGAATGR--RGRRLKRENGGRGFHFI 190
Query: 469 PVLRDLCQGTSGDGG 513
RDL G +G+GG
Sbjct: 191 GEGRDLATGGAGNGG 205
>01_05_0278 - 20313373-20313387,20314617-20315240
Length = 212
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 462 MVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAAVG 355
M + S P P P +P +S + + MH PP+ AA G
Sbjct: 1 MGASCSSPFPPPPSPAESNAPSASAMHHPPHPAAGG 36
>04_01_0122 +
1267048-1267149,1267764-1267855,1268137-1268234,
1268333-1268488,1268736-1269355,1269480-1269547,
1269848-1270099,1270390-1270525,1271054-1271246,
1271386-1271939
Length = 756
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +1
Query: 217 LAPSFQRPGSMCLLLGQR--CGETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHR 390
+ PSF ++G R + GT D + SPR +H T GG + V R
Sbjct: 176 VGPSFGTNSCNRKIIGARWYAYDVPNGTLDTEVLSPRDVHGHGTHTASTAGGNIVHNVSR 235
Query: 391 GSVSAG 408
++AG
Sbjct: 236 LGLAAG 241
>02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356
Length = 444
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 447 SIPVPEPMAPRKSASTDRAPMHSPP 373
++ VPEP+ PR A P+H PP
Sbjct: 79 AVLVPEPLPPRTDAPMPEIPIHPPP 103
>02_02_0449 -
10377835-10377876,10377977-10378117,10378230-10378337,
10378418-10378465,10378568-10378780,10378905-10378969,
10379092-10379216,10379332-10379524,10379621-10379723
Length = 345
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 513 AAISACSLTKISKYW*MMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAA 364
AA++AC+ + + ++ TA++ PEP+ + AS SPP+AA
Sbjct: 12 AAVAACASPAVPRRSLLLSTAAAALQPEPVRLTRGASAAPKLRASPPDAA 61
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -3
Query: 447 SIPVPEPMAPRKSASTDRAPMHSPPNAA 364
S P+P P +PR S+S+ R+P SPP+++
Sbjct: 115 SEPLPHP-SPRVSSSSPRSPTPSPPSSS 141
>08_01_0259 + 2123393-2123555,2123670-2124070
Length = 187
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 447 SIPVPEPMAPRKSASTDRAPMHSPPNA 367
S P P PM PR T AP PP A
Sbjct: 126 SNPAPSPMTPRPRTPTAMAPNAMPPTA 152
>02_05_0593 - 30217432-30218232
Length = 266
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 462 MVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAA 361
++T+ + P K STD + H PPNA A
Sbjct: 171 VITSPAAEAPSSATESKPNSTDASSKHGPPNAGA 204
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 456 TASSIPVPEPMAPRKSASTDRAPMHSPPNAAAV 358
+A +P P+P PR A D+AP+ P AAV
Sbjct: 184 SAPPLP-PQPPPPRNQAQADKAPIPVAPPGAAV 215
>10_01_0022 +
295760-295830,296885-296918,297042-297097,297292-297337
Length = 68
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 680 SIKVPTMYSHPTLTRYENVT 621
S K+P+ SHP +TR+ +VT
Sbjct: 8 SYKIPSSVSHPAMTRHRSVT 27
>04_04_0869 - 28883688-28884983
Length = 431
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 447 SIPVPEPMAPRKSASTDRAPMHSPP 373
S P P P A K ++P HSPP
Sbjct: 354 SSPAPSPKAAGKKKKKGKSPSHSPP 378
>02_03_0182 +
16101861-16101955,16102226-16102372,16102465-16102515,
16102617-16102782,16103055-16103283,16104067-16104638
Length = 419
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 352 HPDG---GRVRRTVHRGSVSAGRLPRGHRLRHWDTARRHHHLPVLRD 483
+PDG G T+ ++ GRLP L H+ +RR H + RD
Sbjct: 188 YPDGHPFGTEFLTIAGDDLAVGRLPINDHLVHFFLSRRRHSTDMARD 234
>01_06_1229 + 35551522-35552169
Length = 215
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 325 LHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLR 435
+HDPR P+HP + T G + GR+ G R R
Sbjct: 1 MHDPRGFPIHPQPYHLHPTA--GGLGEGRMRGGGRRR 35
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/53 (39%), Positives = 23/53 (43%)
Frame = +1
Query: 286 EGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLRHWD 444
E TADG + R L R + PD G RR R S A PR R WD
Sbjct: 61 ETTADGGGAALRLL-QLRAAEMQPDDGGQRR--RRRSEPATTQPRRRASRGWD 110
>09_04_0514 - 18236061-18237392
Length = 443
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 474 YW*MMVTASSIPVPEPMAPRKSASTDRAPMH 382
+W A S+PVPEP+AP +A + H
Sbjct: 86 HWWSRAPARSLPVPEPVAPLVAAPRGGSHSH 116
>05_04_0284 -
19813179-19813340,19813464-19813748,19813850-19814131,
19814224-19814531,19814654-19814927,19815807-19816175,
19816372-19816434,19817495-19817789,19817818-19818008,
19818123-19818428,19818516-19818638
Length = 885
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 496 FLDKDLEVLVNDGDGEQYPSAGADGP 419
+LD D+ V++ND P+A DGP
Sbjct: 252 YLDSDMIVILNDNKQVSLPTATLDGP 277
>03_02_1012 + 13207907-13207990,13209196-13209280,13209402-13210186,
13210262-13210462,13210580-13210690,13211105-13211487,
13211594-13211702,13211786-13211866,13212088-13212156,
13212379-13212467,13212619-13212780,13212859-13212916,
13213143-13213373,13213516-13213662,13213779-13214333,
13214562-13214819,13215096-13215203,13215760-13215854,
13215946-13216102,13216466-13216666,13217542-13217670,
13218292-13218567
Length = 1457
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 472 LVNDGDGEQYPSAGADGPEEVGQH*QSPDAQSSERGRRR 356
L D + EQ P+ D P E ++ SPD +E + R
Sbjct: 1415 LNEDKEPEQEPTTDGDNPAEAAENNISPDDNDTEEAKDR 1453
>02_03_0085 + 15063444-15063889,15064324-15065311
Length = 477
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 373 RRTVHRGSVSAGRLPRGHRLRHWDTARRHHHLP 471
RR R +S+ RLP L HW RR LP
Sbjct: 22 RRLRLRAILSSSRLPTTTPLHHWPRRRRSRGLP 54
>02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810
Length = 472
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 441 PVPEPMAPRKSASTDRAPMHSPPNA 367
P P P P+ +AS A M SPP+A
Sbjct: 288 PTPTPPRPQGTASNTTAAMPSPPSA 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,926,092
Number of Sequences: 37544
Number of extensions: 361835
Number of successful extensions: 1431
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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