Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30916
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 235 3e-62
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 229 2e-60
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 9e-49
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 186 1e-47
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 103 1e-22
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 71 9e-13
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.86
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 31 0.86
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 2.6
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.6
SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11) 29 3.5
SB_52448| Best HMM Match : X (HMM E-Value=1.7) 29 4.6
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.6
SB_46631| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_23914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 8.0
SB_49430| Best HMM Match : Chorion_1 (HMM E-Value=3.2) 28 8.0
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 8.0
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 235 bits (574), Expect = 3e-62
Identities = 133/209 (63%), Positives = 150/209 (71%), Gaps = 4/209 (1%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 245 MNPTTQYSMPNVSSDVSSKMLLCKPT*STGLSR--LSVIR--GKPKIKVAYKGEDKTFFP 412
MNP + ++ + + K P + ++ VIR +PKI+V +KGE K+FFP
Sbjct: 61 MNP--ENTVFDAKRLIGRK--FDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFP 116
Query: 413 EEVSSMVLTKMKETAEAYLGQNCAECSYHGSRYFNDSQRQATKDAGTIFWLETFSEFINE 592
EE+SSMVLTKMKETAEAYLG + YF+DSQRQATKDAGTI L INE
Sbjct: 117 EEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVL-RIINE 175
Query: 593 PTAAAIAYGSLTKRGTGERNVLYLWTSGG 679
PTAAAIAYG L K+ ERNVL GG
Sbjct: 176 PTAAAIAYG-LDKKVGVERNVLIYDLGGG 203
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDKRQT*DQGSI*G*RQNLFP 411
P NT+FDAKRLIGRKF+D V DM HWPF V+ + + Q G +++ FP
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFP 116
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 229 bits (559), Expect = 2e-60
Identities = 127/207 (61%), Positives = 143/207 (69%), Gaps = 2/207 (0%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 245 MNPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVI--RGKPKIKVAYKGEDKTFFPEE 418
+NP + ++ + + + L +I KPKI+V YKGE KTF EE
Sbjct: 61 LNP--ENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEE 118
Query: 419 VSSMVLTKMKETAEAYLGQNCAECSYHGSRYFNDSQRQATKDAGTIFWLETFSEFINEPT 598
+SSMVL KMKETAEAYLGQ YFNDSQRQATKDAGTI L INEPT
Sbjct: 119 ISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVL-RVINEPT 177
Query: 599 AAAIAYGSLTKRGTGERNVLYLWTSGG 679
AAA+AYG L K +GE+NVL GG
Sbjct: 178 AAALAYG-LDKSLSGEKNVLIFDLGGG 203
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 190 bits (463), Expect = 9e-49
Identities = 110/189 (58%), Positives = 123/189 (65%), Gaps = 27/189 (14%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 245 MNPTT-----------QYSMPNVSSDVSSKMLLCKPT*STGLSRLSV-IRGKPK------ 370
MNPT ++ P V D+ K + G ++ V +G+ K
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDM--KHWSFEVVNEAGRPKVKVEYKGETKTFFAEE 118
Query: 371 ---------IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGQNCAECSYHGSRYFNDS 523
+KV YKGE KTFF EE+SSMVL KMKETAEAYLG + YFNDS
Sbjct: 119 VVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDS 178
Query: 524 QRQATKDAG 550
QRQATKDAG
Sbjct: 179 QRQATKDAG 187
Score = 91.9 bits (218), Expect = 4e-19
Identities = 53/88 (60%), Positives = 57/88 (64%)
Frame = +2
Query: 416 EVSSMVLTKMKETAEAYLGQNCAECSYHGSRYFNDSQRQATKDAGTIFWLETFSEFINEP 595
++SSMVL KMKETAEAYLG + YFNDSQRQATKDAG I L INEP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVL-RIINEP 269
Query: 596 TAAAIAYGSLTKRGTGERNVLYLWTSGG 679
TAAAIAYG L K+ ERNVL GG
Sbjct: 270 TAAAIAYG-LDKKVGQERNVLIFDLGGG 296
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD 354
P NTIFDAKRLIGR+F+D V+ DMKHW FEVV++
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNE 97
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 186 bits (453), Expect = 1e-47
Identities = 113/208 (54%), Positives = 132/208 (63%), Gaps = 9/208 (4%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTT 259
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPE- 762
Query: 260 QYSMPNVSSDVSSKMLLCKPT*STGLSR------LSVI--RGKPKIKVAYKGEDKTFFPE 415
N D +K L+ + T + V+ KP ++V K E KTF E
Sbjct: 763 -----NTVFD--AKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAE 815
Query: 416 EVSSMVLTKMKETAEAYLGQNCAECSYHGSRYFNDSQRQATKDAGTIFWLETFSEFINEP 595
E+S+MVLTKMKETAEAYLG+ YFND+QRQATKDAG I L T INEP
Sbjct: 816 EISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGL-TVMRIINEP 874
Query: 596 TAAAIAYGSLTKRGTGERNVLYLWTSGG 679
TAAAIAYG K GE+N+L GG
Sbjct: 875 TAAAIAYGMDKKE--GEKNILVFDLGGG 900
Score = 52.4 bits (120), Expect = 3e-07
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDKRQ 363
P NT+FDAKRLIGR ++D +VQ D+K +PF+VV ++
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKK 798
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 103 bits (248), Expect = 1e-22
Identities = 70/206 (33%), Positives = 99/206 (48%), Gaps = 3/206 (1%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 245 MNP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSVIRGKPKIKVAYKGEDKTFFPEEV 421
+NP T Y +K L + + RG V KG PEE+
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 422 SSMVLTKMKETAEAYLGQNCAECSYHGSRYFNDSQRQATKDAGTIFWLETFSEFINEPTA 601
V+ K++ AE L + F+ QR AT A ++ + T INEPTA
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGI-TVLRVINEPTA 208
Query: 602 AAIAYGSLTKRGTGERNVLYLWTSGG 679
AA+AYG K G NV+ + GG
Sbjct: 209 AALAYGLHKKEGVA--NVMVVDLGGG 232
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 70.9 bits (166), Expect = 9e-13
Identities = 49/118 (41%), Positives = 62/118 (52%), Gaps = 24/118 (20%)
Frame = +2
Query: 371 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGQNCAECSYHGSRYFNDSQRQATKDAG 550
I V GE ++F PE++S++VL ++K AEA+LGQ +FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 551 TIFWLETFS-----------------------EFINEPTAAAIAYG-SLTKRGTGERN 652
TI L+ S INEPTAAAIAYG + G ERN
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = +2
Query: 371 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGQNCAECSYHGSRYFNDSQRQATKDAG 550
I+V Y G+ + F PE+V +M+ T++K TAE L +C Y+ D QR+ DA
Sbjct: 160 IQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDAS 219
Query: 551 TIFWLETFSEFINEPTAAAIAYG 619
L +N+ TA ++AYG
Sbjct: 220 ATAGLNCL-RLMNDTTAVSLAYG 241
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 238
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVV 348
NTI KR IGRKF D VQ ++ H P++VV
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVV 151
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 134 GKVEIIANDQGNRTTPSYVAFTDTERLI 217
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +2
Query: 365 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGQNCAECSYHGSRYFNDSQRQATKD 544
P +K Y+ D TF PEE+ M+L + E + + +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 545 AGTIFWLETFSEFINEPTAAAIAYG 619
A + L + +N TA A+ YG
Sbjct: 127 AAELVGLNVL-QIMNSNTAVALNYG 150
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 143 EIIANDQGNRTTPSYVAFT-DTERL 214
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -2
Query: 617 RKQSQQQSVH**IRRTFQARRWYLHLLWLVFESH*SSGNRDNCILHSFA 471
RK + ++ +H R A+ ++ LWL F + SS + D C+LHS A
Sbjct: 397 RKDNYEKEIH----RLITAKD-VIYTLWLDFSRYYSSASSDICVLHSIA 440
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 52 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 228
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 229 QEPGGDEPHNTIFDA 273
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 332 GLSRLSVI-RGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKET 454
G R++VI RGKPK +V + +DK P S++V+ +M +T
Sbjct: 4622 GSIRMTVIVRGKPKPEVKWSKDDKPLTPN--SNIVMEEMDDT 4661
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 251 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 153
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11)
Length = 1384
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 679 AARGPKIKYISFSSTPFC*RTVSNRSSSRFIDEFGERFKPEDGTCI--FCGLSLR 521
A P ++ I+FS+TP+C + + S G RFK G+ +CG R
Sbjct: 585 ATASPTVE-IAFSTTPYCGNRIKHHGGSHSKPYCGNRFKHHGGSDSKPYCGNRFR 638
>SB_52448| Best HMM Match : X (HMM E-Value=1.7)
Length = 549
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 598 CCCDCLRFFNKKGYWRTKCTLSLDLGR 678
CCC N+KG WRT C L R
Sbjct: 145 CCCRLPAPRNRKGGWRTSCRAWLSYDR 171
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 11 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 97
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_46631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 302 MLLCKPT*STGLSRLSVIRGKPKIKVAYKGEDKTFFPEE 418
MLL P LS +VI GK KIK+ ++ E+K +E
Sbjct: 6 MLLSLPD-EKNLSTAAVIDGKGKIKIGFQHEEKPLTADE 43
>SB_23914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 302 MLLCKPT*STGLSRLSVIRGKPKIKVAYKGEDKTFFPEE 418
MLL P LS +VI GK KIK+ ++ E+K +E
Sbjct: 6 MLLSLPD-EKNLSTAAVIDGKGKIKIGFQHEEKPLTADE 43
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_49430| Best HMM Match : Chorion_1 (HMM E-Value=3.2)
Length = 273
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 511 VAGTVITAFCTVLPKISFGSFLHFRKHHGTDF 416
VAG VI A C ++ + FL+ RK H F
Sbjct: 210 VAGGVIAAVCLIIIALGIAYFLYKRKKHRDRF 241
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +2
Query: 104 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 283
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 284 SDVSSKMLLCKP 319
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,673,779
Number of Sequences: 59808
Number of extensions: 552879
Number of successful extensions: 1770
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1758
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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