Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30915
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    27   0.15 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.7  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 468 LGVKQLIVGVNKMDPLNHHTVSPDL-RKSRRKYPHTSRRLATTQLLSLFVPISGWH 632
           LG+K L + ++  + L  + ++P L RKS  KY          + +S+ VPISG H
Sbjct: 344 LGMKYLDMVIS--ETLRKYPLAPFLNRKSDVKYTFEETGFTLDKGVSIMVPISGLH 397


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 305 GNIVLASFELPESNIDCIPS 246
           GNI +  + +P  NI+ +P+
Sbjct: 151 GNIAMELWNMPRENIEPLPN 170


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 588 TTQLLSLFVPISGWHG 635
           T QLLSL     GW G
Sbjct: 2   TIQLLSLICKFGGWMG 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,968
Number of Sequences: 336
Number of extensions: 3901
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)