BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30914 (810 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 90 2e-18 U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 86 3e-17 AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 86 3e-17 AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 69 4e-12 U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 64 9e-11 U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 64 9e-11 Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 62 6e-10 AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 57 2e-08 Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 55 7e-08 AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-bindin... 48 6e-06 Z67755-2|CAA91755.2| 322|Caenorhabditis elegans Hypothetical pr... 28 9.1 AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 9.1 AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 28 9.1 AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 9.1 >Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical protein F36H1.1 protein. Length = 139 Score = 89.8 bits (213), Expect = 2e-18 Identities = 41/63 (65%), Positives = 49/63 (77%) Frame = +1 Query: 256 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 435 + FTF +G G VIKGWDQGLL+MCVGE+R LTIP LGYGERGA IP ++ L F+VEL Sbjct: 70 EEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVEL 129 Query: 436 INI 444 + I Sbjct: 130 MKI 132 Score = 50.8 bits (116), Expect = 1e-06 Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 3/109 (2%) Frame = +2 Query: 71 VLMLVALAGATFAGPE--VTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 244 ++ L+ L +A E + +L+ V E C KS+ GD L MHYTGTL DG +FDSS Sbjct: 6 IVGLLCLLAIAYAADEQKIDKLQIGVKKRAENCVQKSRKGDQLHMHYTGTLLDGTEFDSS 65 Query: 245 YDRVNLLRSKLALGK*SRDGTRACLT-CALVRNVN*LFPHPWATESAEP 388 R L G + + L C R + + PH E P Sbjct: 66 RTRNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGERGAP 114 >U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. Length = 108 Score = 85.8 bits (203), Expect = 3e-17 Identities = 40/62 (64%), Positives = 46/62 (74%) Frame = +1 Query: 259 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELI 438 PF F+IG G+VIKGWDQG+ M VGEK KLTI A LGYG RG IP +ATL FEVEL+ Sbjct: 46 PFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105 Query: 439 NI 444 + Sbjct: 106 GV 107 Score = 39.1 bits (87), Expect = 0.004 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +2 Query: 167 TKSKHGDMLTMHYTGTLDDGHKFDSSYDRVNLLRSKLALGK 289 TK K+G +T HY TL++G K DSS DR + K+ G+ Sbjct: 15 TKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGE 55 >AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical protein Y18D10A.19 protein. Length = 108 Score = 85.8 bits (203), Expect = 3e-17 Identities = 40/62 (64%), Positives = 46/62 (74%) Frame = +1 Query: 259 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELI 438 PF F+IG G+VIKGWDQG+ M VGEK KLTI A LGYG RG IP +ATL FEVEL+ Sbjct: 46 PFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105 Query: 439 NI 444 + Sbjct: 106 GV 107 Score = 39.1 bits (87), Expect = 0.004 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +2 Query: 167 TKSKHGDMLTMHYTGTLDDGHKFDSSYDRVNLLRSKLALGK 289 TK K+G +T HY TL++G K DSS DR + K+ G+ Sbjct: 15 TKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGE 55 >AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding protein family protein3 protein. Length = 261 Score = 68.9 bits (161), Expect = 4e-12 Identities = 31/60 (51%), Positives = 40/60 (66%) Frame = +1 Query: 256 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 435 +PF F++G GQVIKG D + MC GEKRK+ IP L YGE G IP ++ LHF++ L Sbjct: 191 RPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSL 250 Score = 52.0 bits (119), Expect = 5e-07 Identities = 27/64 (42%), Positives = 40/64 (62%) Frame = +1 Query: 253 RQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVE 432 ++P+TF +G G+VI G + + MCVGE+RK+ IP G+ E G V TL++ VE Sbjct: 71 QKPYTFTLGKGEVIHGMEIAMEGMCVGEQRKVIIPPEQGFDEDG-DEVEGKGETLYYFVE 129 Query: 433 LINI 444 L +I Sbjct: 130 LKSI 133 Score = 38.7 bits (86), Expect = 0.005 Identities = 19/45 (42%), Positives = 25/45 (55%) Frame = +2 Query: 155 EGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRVNLLRSKLALGK 289 EGCT K++ GD L YT L+DG DSS+ R K+ G+ Sbjct: 157 EGCTEKAQAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQ 201 >U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding protein family protein5, isoform a protein. Length = 264 Score = 64.5 bits (150), Expect = 9e-11 Identities = 28/71 (39%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Frame = +1 Query: 250 SRQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG-AGNVIPPHATLHFE 426 +++P+TF +G GQVI G ++ + MC GEKRK+ IP +LG+G++G + I TL++ Sbjct: 72 NKKPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYT 131 Query: 427 VELINIGDSPP 459 V+L+++ + P Sbjct: 132 VQLVDLFRAVP 142 Score = 59.7 bits (138), Expect = 2e-09 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +1 Query: 259 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 435 PF F++ +VIKG D + MC GE+R++ IP+ GYG+ G IP A L+F++ L Sbjct: 197 PFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITL 255 Score = 28.7 bits (61), Expect = 5.2 Identities = 19/65 (29%), Positives = 31/65 (47%) Frame = +2 Query: 59 TLRCVLMLVALAGATFAGPEVTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFD 238 T++ V + A+ G + E ++ + + E KSK GD + Y L+DG D Sbjct: 131 TVQLVDLFRAVPGEKWTTDEGIVIE-QTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVD 189 Query: 239 SSYDR 253 SS+ R Sbjct: 190 SSFSR 194 >U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding protein family protein5, isoform b protein. Length = 300 Score = 64.5 bits (150), Expect = 9e-11 Identities = 28/71 (39%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Frame = +1 Query: 250 SRQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG-AGNVIPPHATLHFE 426 +++P+TF +G GQVI G ++ + MC GEKRK+ IP +LG+G++G + I TL++ Sbjct: 108 NKKPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYT 167 Query: 427 VELINIGDSPP 459 V+L+++ + P Sbjct: 168 VQLVDLFRAVP 178 Score = 59.7 bits (138), Expect = 2e-09 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +1 Query: 259 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 435 PF F++ +VIKG D + MC GE+R++ IP+ GYG+ G IP A L+F++ L Sbjct: 233 PFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITL 291 Score = 28.7 bits (61), Expect = 5.2 Identities = 19/65 (29%), Positives = 31/65 (47%) Frame = +2 Query: 59 TLRCVLMLVALAGATFAGPEVTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFD 238 T++ V + A+ G + E ++ + + E KSK GD + Y L+DG D Sbjct: 167 TVQLVDLFRAVPGEKWTTDEGIVIE-QTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVD 225 Query: 239 SSYDR 253 SS+ R Sbjct: 226 SSFSR 230 >Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical protein F31D4.3 protein. Length = 431 Score = 61.7 bits (143), Expect = 6e-10 Identities = 30/58 (51%), Positives = 37/58 (63%) Frame = +1 Query: 262 FTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 435 F+F +G G VIKGWD G+ M GE + TI + GYG+ G+ IP ATL FEVEL Sbjct: 60 FSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117 Score = 35.5 bits (78), Expect = 0.045 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 Query: 170 KSKHGDMLTMHYTGTLDDGHKFDSSYDRVNLLRSKLALG 286 K G + +HY GTL++G KFDSS DR + L G Sbjct: 29 KPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRG 67 >AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical protein Y18D10A.25 protein. Length = 290 Score = 56.8 bits (131), Expect = 2e-08 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = +1 Query: 250 SRQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEV 429 S+ P F+IG G+VI G D G+ M VGE + GYG G +IP +A+L +V Sbjct: 125 SQNPIIFKIGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKV 184 Query: 430 ELINIG-DSPPATNVFKEIDADKDNMLSAKK*ATI 531 L N DS V ++I DN+ +K T+ Sbjct: 185 RLFNCSWDSYAKIGVDRQILVQGDNVTKSKNGQTV 219 Score = 54.4 bits (125), Expect = 9e-08 Identities = 25/42 (59%), Positives = 31/42 (73%) Frame = +1 Query: 259 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG 384 PF F+IG G+VIKGWDQG+ M V EK KLTI + G+ E+G Sbjct: 242 PFKFKIGKGEVIKGWDQGVAQMSVKEKSKLTIAPAFGF-EKG 282 Score = 38.7 bits (86), Expect = 0.005 Identities = 19/41 (46%), Positives = 24/41 (58%) Frame = +2 Query: 167 TKSKHGDMLTMHYTGTLDDGHKFDSSYDRVNLLRSKLALGK 289 TKSK+G +T HY L DG K DSS DR + K+ G+ Sbjct: 211 TKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGE 251 >Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical protein ZC455.10 protein. Length = 259 Score = 54.8 bits (126), Expect = 7e-08 Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%) Frame = +1 Query: 253 RQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVE 432 ++P+TF +G QVI G D+ + MC+GE RK+ IP LG+ + G L++ V+ Sbjct: 75 KKPYTFTLGRNQVIPGMDRAMRGMCIGEIRKVVIPPKLGFAKDSTGQ------PLYYTVQ 128 Query: 433 LINIGDSPPATNVFKE--IDADKDNMLSAKK 519 L+N+ + P E I D+ + + A K Sbjct: 129 LVNLFRANPGERWVTEEGIQIDQIHKIEADK 159 Score = 53.6 bits (123), Expect = 2e-07 Identities = 25/59 (42%), Positives = 36/59 (61%) Frame = +1 Query: 259 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 435 PF F++ +VI G D + MC GE+R++ IP+ GYG +G+ IP A L FE+ L Sbjct: 192 PFVFRLRNREVIDGMDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVL 250 >AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-binding protein family protein7 protein. Length = 318 Score = 48.4 bits (110), Expect = 6e-06 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Frame = +1 Query: 259 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGA--GNVIPPHATLHFEVE 432 P T Q+G G ++ G D+GL MC E RK+ +P + + N+ L F +E Sbjct: 118 PVTIQLGTGMIMPGLDKGLKGMCAEELRKVRVPYRMSRKSKSKVWKNIPNDENWLIFNIE 177 Query: 433 LINIGDSPPATNVFKEIDADKDNMLSAKK 519 ++ I P FK +D ++D L+ K+ Sbjct: 178 MVEIKPYTPEIQ-FKFLDLNEDEQLTNKE 205 >Z67755-2|CAA91755.2| 322|Caenorhabditis elegans Hypothetical protein F54F7.2 protein. Length = 322 Score = 27.9 bits (59), Expect = 9.1 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 501 HALREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEE 620 H+ REE LK A GG++S+++ SH L E+ Sbjct: 18 HSYREEPYHTLKVPFSSAKGGQISKEVFIEFYSHTVLTEQ 57 >AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide exchange factorfor RAS protein. Length = 1413 Score = 27.9 bits (59), Expect = 9.1 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Frame = -2 Query: 452 ESPMLINSTSKCNVAWGGITLP----APRSP*PKDAGIVSLRFSPTHMSS 315 + P L+ +S+ N + ++LP AP P PK +G++S SPT +++ Sbjct: 1270 QPPPLLPRSSRANQS-NSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTT 1318 >AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical protein F20H11.4 protein. Length = 446 Score = 27.9 bits (59), Expect = 9.1 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = -1 Query: 483 DFLEHVCGRWRVTDVDQL 430 D + HVCG +R+T +DQ+ Sbjct: 232 DNISHVCGIYRITKIDQM 249 >AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos homolog protein 1 protein. Length = 1493 Score = 27.9 bits (59), Expect = 9.1 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Frame = -2 Query: 452 ESPMLINSTSKCNVAWGGITLP----APRSP*PKDAGIVSLRFSPTHMSS 315 + P L+ +S+ N + ++LP AP P PK +G++S SPT +++ Sbjct: 1270 QPPPLLPRSSRANQS-NSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTT 1318 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,458,727 Number of Sequences: 27780 Number of extensions: 396281 Number of successful extensions: 1070 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1001 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1070 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1987863822 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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