Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30913
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    24   1.0  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   1.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.1  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   5.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.5  

>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
          hormone 1 protein.
          Length = 73

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 13 RMYSIAFVLFFVGACYCDVDFS 78
          RM+ I  ++ FVG C   ++FS
Sbjct: 3  RMFLIVVLIAFVGVCTAQLNFS 24


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 205 YRTLLKRFPSSKSISQTARSQRAHQ 131
           YRT+ KR  S     +T  S R HQ
Sbjct: 162 YRTIKKRLRSCDLCQKTKSSNRPHQ 186


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -3

Query: 572 QSPKAFEGYHVG*YQS*FLEVLRA--QNVRDASPG 474
           + P   EG+ V   Q  +LE LRA   N R   PG
Sbjct: 467 ERPALIEGWKVEKIQEIYLEALRAYVDNRRKPKPG 501


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 333 NFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPNSARIANT 461
           NF+     F+L PA      +DF AS+    F      R  NT
Sbjct: 307 NFLKRHTGFSLRPAAGLLTARDFLASLAFRIFQSTQYVRHKNT 349


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +3

Query: 579 NKF*TTELEPFYNEDRLVIGSVKMMYQKG 665
           NK+   +++   N DR++   +K +  +G
Sbjct: 25  NKYDNVDVDKILNNDRVLTNYIKCLMDEG 53


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 189 SDSRHQSPYPKRRDHNVPISLSL 121
           SD+R   PYP+   ++   SLSL
Sbjct: 30  SDTRPMLPYPQNYINSYLFSLSL 52


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 623 VFIIEGLQFGCSEFVERQSPKAFEGYHV 540
           +F +  L F C++  +  +  AF  YH+
Sbjct: 147 IFDLIFLSFRCTKLCKEANKTAFLWYHI 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,866
Number of Sequences: 336
Number of extensions: 3495
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)