Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30913
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    58   6e-09
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    58   6e-09
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    55   4e-08
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    55   4e-08
AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or cys...    52   5e-07
AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin prote...    52   5e-07
U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    44   8e-05
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    44   8e-05
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AY835433-1|AAX37360.1|  331|Caenorhabditis elegans bZIP transcri...    29   4.1  
AY835432-1|AAX37359.1|  467|Caenorhabditis elegans bZIP transcri...    29   4.1  
AF016440-2|AAB65905.2|  331|Caenorhabditis elegans Abnormal ever...    29   4.1  
AF016440-1|ABA54419.1|  467|Caenorhabditis elegans Abnormal ever...    29   4.1  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
 Frame = +3

Query: 258 LIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDP 437
           L+E +  ++  V + T  GV +   N V+L   FT+ P F +T  K++GA  K LD + P
Sbjct: 63  LVEHFSFVSKEVKNGT-KGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTP 121

Query: 438 NSARIANTYIE-KSGGRVSNVLRSENFQESRLILTNVISFKGLWGLPFN 581
            + +  N+++   + G++ N+   ++ +++  +L N I FK  W   F+
Sbjct: 122 AAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWDDKFD 170


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 31/109 (28%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
 Frame = +3

Query: 258 LIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDP 437
           L+E +  ++  V + T  GV +   N V+L   FT+ P F +T  K++GA  K LD + P
Sbjct: 63  LVEHFSFVSKEVKNGT-KGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTP 121

Query: 438 NSARIANTYIE-KSGGRVSNVLRSENFQESRLILTNVISFKGLWGLPFN 581
            + +  N+++   + G++ N+   ++ +++  +L N I FK  W   F+
Sbjct: 122 AAVQEINSFVNTATNGKIKNIATQDSIKDAIALLINSIYFKADWDDKFD 170


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
 Frame = +3

Query: 258 LIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSD- 434
           + E +  L + V D T NGV     N VF++  +T+   +  T++K + AS + LDFS  
Sbjct: 60  IFEEFSGLMEAVGD-TDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQT 118

Query: 435 PNSARIANTYIEK-SGGRVSNVLRSENFQESRLILTNVISFKGLWGLPFNKF*TTELEPF 611
             +A+  NT++E  + G++ +++ +++   +   L N + FK  W   F K  TT  E F
Sbjct: 119 EQAAKTMNTFVENHTNGKIKDLIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFF 178

Query: 612 YNE 620
            +E
Sbjct: 179 TSE 181


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
 Frame = +3

Query: 258 LIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSD- 434
           + E +  L + V D T NGV     N VF++  +T+   +  T++K + AS + LDFS  
Sbjct: 60  IFEEFSGLMEAVGD-TDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQT 118

Query: 435 PNSARIANTYIEK-SGGRVSNVLRSENFQESRLILTNVISFKGLWGLPFNKF*TTELEPF 611
             +A+  NT++E  + G++ +++ +++   +   L N + FK  W   F K  TT  E F
Sbjct: 119 EQAAKTMNTFVENHTNGKIKDLIPADSANNAFAFLVNAMYFKADWQSKFAKESTTGREFF 178

Query: 612 YNE 620
            +E
Sbjct: 179 TSE 181


>AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
 Frame = +3

Query: 276 SLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFS-DPNSARI 452
           S  + +L+ + N V  +  N +F+  +  +  AF   L++ + A    +DF     +A+I
Sbjct: 75  SFINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKI 134

Query: 453 ANTYI-EKSGGRVSNVLRSENFQESRLILTNVISFKGLWGLPFNKF*TTELEPFYNEDRL 629
            N +I E + G++ ++++ +N ++   IL N I F+G W   F +   +       E+RL
Sbjct: 135 MNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKFGEPAESNFSISATENRL 194

Query: 630 V 632
           V
Sbjct: 195 V 195


>AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin protein
           1 protein.
          Length = 366

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
 Frame = +3

Query: 276 SLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFS-DPNSARI 452
           S  + +L+ + N V  +  N +F+  +  +  AF   L++ + A    +DF     +A+I
Sbjct: 75  SFINKLLNSSVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKI 134

Query: 453 ANTYI-EKSGGRVSNVLRSENFQESRLILTNVISFKGLWGLPFNKF*TTELEPFYNEDRL 629
            N +I E + G++ ++++ +N ++   IL N I F+G W   F +   +       E+RL
Sbjct: 135 MNQFISESTKGKIPDMIKPDNLKDVDAILINAIFFQGDWRRKFGEPAESNFSISATENRL 194

Query: 630 V 632
           V
Sbjct: 195 V 195


>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
 Frame = +3

Query: 312 GVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPN-SARIANTYI-EKSGGR 485
           G  +   N +F    FT+   +   ++K + A    L+F D   SA   N ++ E + G 
Sbjct: 90  GTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149

Query: 486 VSNVLRSENFQESRL-ILTNVISFKGLWGLPFNKF*TTELEPFYNED 623
           +  ++  ++  E  + +LTN   FK  W   F K  T + E F +E+
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSEN 196


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
 Frame = +3

Query: 312 GVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPN-SARIANTYI-EKSGGR 485
           G  +   N +F    FT+   +   ++K + A    L+F D   SA   N ++ E + G 
Sbjct: 90  GTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGH 149

Query: 486 VSNVLRSENFQESRL-ILTNVISFKGLWGLPFNKF*TTELEPFYNED 623
           +  ++  ++  E  + +LTN   FK  W   F K  T + E F +E+
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSEN 196


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
 Frame = -2

Query: 408 KHRNPSGASS*RPATR*NRCPRRQSSD*PGILRSRSDRAPRPSGICTLRSACR----IFG 241
           + R+PS + S  PA R  R P +  S  P   +SRS   P P+      SA +       
Sbjct: 304 RRRSPSASKSPPPARR-RRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPK 362

Query: 240 QNKRSAQLPVAITGRS*SDSRHQSPYPKRR 151
           + K  ++ P A   RS S S+   P P+RR
Sbjct: 363 RAKSRSKSPPARRRRSPSASK-SPPAPRRR 391


>AY835433-1|AAX37360.1|  331|Caenorhabditis elegans bZIP
           transcription factor FOS-1b protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/65 (23%), Positives = 28/65 (43%)
 Frame = -3

Query: 443 RIRVAEVKHFNRSTEILLERRPEGRQQGEIVVQEDKVPTDQGYSVRGLIEHHVRQGFVPF 264
           R ++  +K++  + +  L R     +   +++    VP  Q Y    L  H  R   VP+
Sbjct: 77  RNKLNSLKNYLETHDCKLSREERTHEINRLIIPPSTVPPSQPYLQHSLRVHPPRADSVPY 136

Query: 263 DQRAG 249
             R+G
Sbjct: 137 SIRSG 141


>AY835432-1|AAX37359.1|  467|Caenorhabditis elegans bZIP
           transcription factor FOS-1a protein.
          Length = 467

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/65 (23%), Positives = 28/65 (43%)
 Frame = -3

Query: 443 RIRVAEVKHFNRSTEILLERRPEGRQQGEIVVQEDKVPTDQGYSVRGLIEHHVRQGFVPF 264
           R ++  +K++  + +  L R     +   +++    VP  Q Y    L  H  R   VP+
Sbjct: 213 RNKLNSLKNYLETHDCKLSREERTHEINRLIIPPSTVPPSQPYLQHSLRVHPPRADSVPY 272

Query: 263 DQRAG 249
             R+G
Sbjct: 273 SIRSG 277


>AF016440-2|AAB65905.2|  331|Caenorhabditis elegans Abnormal
           eversion of vulva protein5, isoform a protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/65 (23%), Positives = 28/65 (43%)
 Frame = -3

Query: 443 RIRVAEVKHFNRSTEILLERRPEGRQQGEIVVQEDKVPTDQGYSVRGLIEHHVRQGFVPF 264
           R ++  +K++  + +  L R     +   +++    VP  Q Y    L  H  R   VP+
Sbjct: 77  RNKLNSLKNYLETHDCKLSREERTHEINRLIIPPSTVPPSQPYLQHSLRVHPPRADSVPY 136

Query: 263 DQRAG 249
             R+G
Sbjct: 137 SIRSG 141


>AF016440-1|ABA54419.1|  467|Caenorhabditis elegans Abnormal
           eversion of vulva protein5, isoform b protein.
          Length = 467

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/65 (23%), Positives = 28/65 (43%)
 Frame = -3

Query: 443 RIRVAEVKHFNRSTEILLERRPEGRQQGEIVVQEDKVPTDQGYSVRGLIEHHVRQGFVPF 264
           R ++  +K++  + +  L R     +   +++    VP  Q Y    L  H  R   VP+
Sbjct: 213 RNKLNSLKNYLETHDCKLSREERTHEINRLIIPPSTVPPSQPYLQHSLRVHPPRADSVPY 272

Query: 263 DQRAG 249
             R+G
Sbjct: 273 SIRSG 277


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
           protein ZC116.3 protein.
          Length = 3871

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 426 FSDPNSARIANTYIEKSGGRVSNVLRSENF 515
           F  PN+      Y+E SGGR  N L +  +
Sbjct: 875 FYTPNAVETYENYVEFSGGRTDNALFNRRY 904


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
           protein ZC116.3 protein.
          Length = 3871

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 426 FSDPNSARIANTYIEKSGGRVSNVLRSENF 515
           F  PN+      Y+E SGGR  N L +  +
Sbjct: 875 FYTPNAVETYENYVEFSGGRTDNALFNRRY 904


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,980,429
Number of Sequences: 27780
Number of extensions: 347445
Number of successful extensions: 968
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)