Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30913
(691 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 45 5e-05
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 43 2e-04
At2g35580.1 68415.m04357 serpin family protein / serine protease... 40 0.002
At1g64030.1 68414.m07252 serpin family protein / serine protease... 39 0.003
At4g21180.1 68417.m03063 DNAJ heat shock N-terminal domain-conta... 33 0.18
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 32 0.31
At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-conta... 30 1.3
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 30 1.7
At1g58050.1 68414.m06579 helicase domain-containing protein cont... 29 2.2
At3g47760.1 68416.m05203 ABC transporter family protein probable... 29 3.8
At3g47750.1 68416.m05202 ABC transporter family protein probable... 29 3.8
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 3.8
At1g60140.1 68414.m06775 glycosyl transferase family 20 protein ... 29 3.8
At1g19700.1 68414.m02457 homeobox-leucine zipper family protein ... 29 3.8
At5g48840.1 68418.m06042 pantoate-beta-alanine ligase, putative ... 28 5.1
At2g25110.1 68415.m03004 MIR domain-containing protein similar t... 28 6.7
At1g29570.1 68414.m03616 zinc finger protein-related contains si... 28 6.7
At5g43500.2 68418.m05318 expressed protein 27 8.9
At5g43500.1 68418.m05319 expressed protein 27 8.9
At3g62080.1 68416.m06975 SNF7 family protein contains Pfam domai... 27 8.9
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 27 8.9
At2g14540.1 68415.m01628 serpin family protein / serine protease... 27 8.9
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 44.8 bits (101), Expect = 5e-05
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Frame = +3
Query: 288 VVLDQTANGVSLVS-RNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPNSARIA--N 458
V+ D +ANG +S N ++D + P+F+ L+ + A+ DF IA N
Sbjct: 80 VLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVN 139
Query: 459 TYIEK-SGGRVSNVLRSENFQE-SRLILTNVISFKGLWGLPFNKF*TTELE 605
++ EK + G ++ VL + ++LI N + FKG W F++ T E E
Sbjct: 140 SWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGE 190
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +3
Query: 339 VFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPNSARI--ANTYIE-KSGGRVSNVLRSE 509
V++D + P+F+ L+ + A+ +DF+ + I N + E + G + +L +
Sbjct: 98 VWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGLIKEILSDD 157
Query: 510 NFQ---ESRLILTNVISFKGLWGLPFN 581
+ + ES LIL N + FKG W F+
Sbjct: 158 SIKTIRESMLILANAVYFKGAWSKKFD 184
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +3
Query: 279 LTDVVLDQTANGVSLVSR-NFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPNSA--R 449
+T V+ D TA+G +S N ++++ + P+F+ L + A+ +DF R
Sbjct: 77 VTTVLADSTASGGPTISAANGLWIEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNR 136
Query: 450 IANTYIEK-SGGRVSNVLRSENFQESRL---ILTNVISFKGLWGLPFN 581
N+++EK + G ++N+L S N + + L I N + F G W F+
Sbjct: 137 EVNSWVEKQTNGLITNLLPS-NPKSAPLTDHIFANALFFNGRWDSQFD 183
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Frame = +3
Query: 270 YKSLTDVVL-DQTANG-VSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDF-SDPN 440
++ L VV D++A G + + N +++D P F+ + F A +DF S+
Sbjct: 74 FRELASVVYADRSATGGPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAE 133
Query: 441 SARI-ANTYIEKSGGRVSNVLRSENFQES--RLILTNVISFKGLWGLPFNKF*TTELEPF 611
R N+++E + L + S I N +SFKG W PF K+ T + F
Sbjct: 134 EVRKEVNSWVEHHTNNLIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRD-NDF 192
Query: 612 Y 614
Y
Sbjct: 193 Y 193
>At4g21180.1 68417.m03063 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 661
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 100 IELLYHTQTQTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILPKNP 252
I L+YHT+ + + PFGI L G + +YR+LS + KNP
Sbjct: 82 IFLIYHTKNMSRESQLFEPFGILGLEPGASDSEIKKAYRRLSIQYHPDKNP 132
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 32.3 bits (70), Expect = 0.31
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Frame = +3
Query: 339 VFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDPNSARI--ANTYIE-KSGGRVSNVLRSE 509
V++D L P+F+ L+ + AS +DF+ I N + + + G + +L +
Sbjct: 95 VWIDKSSYLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTNGLIKQILSRD 154
Query: 510 ------NFQESRLILTNVISFKGLWGLPFN 581
+ S LIL N + FK W F+
Sbjct: 155 CTDTIKEIRNSTLILANAVYFKAAWSRKFD 184
>At1g79940.1 68414.m09342 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 702
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 100 IELLYHTQTQTDGHVVISPFGIWTLMTGIALGASGNSYRQLSRAFILPKNP 252
I L+Y+T+ + V PF I L G+ +YR+LS + KNP
Sbjct: 82 IFLIYYTKNMSREAQVFDPFSILGLEPGVTDSEIKKAYRRLSIQYHPDKNP 132
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/87 (22%), Positives = 37/87 (42%)
Frame = +3
Query: 219 AEQSVYFAQKSGTLIEGYKSLTDVVLDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKD 398
AE++ + +K ++ ++ D SL+ + ++ L DF+ L + LQ D
Sbjct: 22 AERADEYIRKIYAELDSVRAKADAASITAEQTCSLLEQKYLSLSQDFSSLESQNAKLQSD 81
Query: 399 FGASIKVLDFSDPNSARIANTYIEKSG 479
F + L S ++ IEK G
Sbjct: 82 FDDRLAELAQSQAQKHQLHLQSIEKDG 108
>At1g58050.1 68414.m06579 helicase domain-containing protein
contains similarity to SP|P24785 Dosage compensation
regulator (Male-less protein) (No action potential
protein) {Drosophila melanogaster}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 1417
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -1
Query: 361 VKSLSKKTKFRLTRDTPFAV*SSTTSVRDLYPSISVP 251
++ + ++TK+ L D+P A+ SS TS+ D S++VP
Sbjct: 792 LEDIYERTKYLLASDSPAAL-SSDTSITDKLGSVNVP 827
>At3g47760.1 68416.m05203 ABC transporter family protein probable
transport protein ABC-C, Homo sapiens, PIR2:S71363
Length = 872
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -3
Query: 635 YYQSVFIIEGLQFGCSEFVERQSPKAFEGYHVG*YQS*FLEVLRAQNVRDASPGFFDVGV 456
+++ V +EGL + +E S + F+GY G + EV A ++ D F+V +
Sbjct: 186 FHKEVRCVEGLNLWRNNSIEI-SNEIFKGYRQGNLEEIINEVAAAYDLMDTDINNFNVTI 244
Query: 455 GYSS 444
Y+S
Sbjct: 245 WYNS 248
>At3g47750.1 68416.m05202 ABC transporter family protein probable
transport protein ABC-C, Homo sapiens, PIR2:S71363
Length = 944
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = -3
Query: 635 YYQSVFIIEGLQFGCSEFVERQSPKAFEGYHVG*YQS*FLEVLRAQNVRDASPGFFDVGV 456
+++ V ++GL + VE + + F+GY G ++ EV A ++ D F+V +
Sbjct: 216 FHKEVRCVQGLNLWRNNSVE-VNDEIFKGYRQGNHEEIINEVAAAYDLLDTDRNKFNVTI 274
Query: 455 GYSS 444
Y+S
Sbjct: 275 WYNS 278
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 28.7 bits (61), Expect = 3.8
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Frame = -2
Query: 408 KHRNPSGASS*R----PATR*NRCP---RRQSSD*PGILRSRSDRAPR-----PSGICTL 265
+HR+P+ + R P R +R P RR+ S P R RS P PS +
Sbjct: 339 RHRSPTPPARQRRSPSPPARRHRSPPPARRRRSPSPPARRRRSPSPPARRRRSPSPLYRR 398
Query: 264 -RSACRIFGQNKRSAQLPVAITGRS*SDSRHQSPYPKRRD 148
RS ++ +N+ ++ P+A GRS S R SP + RD
Sbjct: 399 NRSPSPLYRRNR--SRSPLAKRGRSDSPGRSPSPVARLRD 436
>At1g60140.1 68414.m06775 glycosyl transferase family 20 protein /
trehalose-phosphatase family protein contains Pfam
profile: PF02358 trehalose-phosphatase
Length = 861
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +3
Query: 294 LDQTANGVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGA----SIKVLDFSDPNSARIANT 461
++QT + S+ +FLD D TL+P T++ KD A ++K L SDPN+
Sbjct: 579 IEQTVSAYRRSSKRAIFLDYDGTLVP--ETSIVKDPSAEVISALKAL-CSDPNN----TI 631
Query: 462 YIEKSGGRVS 491
+I G+VS
Sbjct: 632 FIVSGRGKVS 641
>At1g19700.1 68414.m02457 homeobox-leucine zipper family protein
similar to BEL1-like homeodomain 1 (GI:13877517)
[Arabidopsis thaliana]; similar to homeodomain protein
GI:7239157 from (Malus domestica); contains weak hit to
Pfam profile PF00046: Homeobox domain
Length = 538
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 462 YIEKSGGRVSNVLRSENFQESRLILTNVISFK 557
Y E SGG +S+VLRS + ++ +L V+S K
Sbjct: 155 YNETSGGFMSSVLRSRYLKPAQNLLDEVVSVK 186
>At5g48840.1 68418.m06042 pantoate-beta-alanine ligase, putative
similar to pantoate--beta-alanine ligase [Lotus
japonicus] GI:2292921; contains Pfam profile PF02569:
pantoate--beta-alanine ligase
Length = 310
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 556 LKDITLVSINLDSWKFSERRTFETRPPDFS 467
L D+T+VSI ++ +FS T P DFS
Sbjct: 49 LTDVTVVSIYVNPGQFSPTEDLSTYPSDFS 78
>At2g25110.1 68415.m03004 MIR domain-containing protein similar to
SP|Q99470 Stromal cell-derived factor 2 precursor
(SDF-2) {Homo sapiens}; contains Pfam profile PF02815:
MIR domain
Length = 218
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 385 VVLKAGNKVKSLSKKTKFRL-TRDTPFAV*SSTTSVRDLYPSISVPDFW 242
V + G+ +K + +KTKFRL + D P+ S SV + +W
Sbjct: 35 VEITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVVDSNSYW 83
>At1g29570.1 68414.m03616 zinc finger protein-related contains
similarity to zinc finger proteins (CCCH type)
Length = 321
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 342 RQSSD*PGILRSRSDRAPRPSGICTLRSACRIFGQNKRSAQLPVAI 205
RQSS P + + +G+C RS+CR +R +LPV I
Sbjct: 47 RQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRI 92
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 678 ERELPLSGTSFLRCLLPVGLHYRRAP 601
E+ LP G RCLL + HY++ P
Sbjct: 311 EKILPFGGEDICRCLLWIQRHYQKWP 336
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 678 ERELPLSGTSFLRCLLPVGLHYRRAP 601
E+ LP G RCLL + HY++ P
Sbjct: 323 EKILPFGGEDICRCLLWIQRHYQKWP 348
>At3g62080.1 68416.m06975 SNF7 family protein contains Pfam domain,
PF03357: SNF7 family
Length = 423
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 402 GASIKVLDFSDPNSARIANTYIEKSGGRVSNVLRSENFQESRLILTNVISFK 557
G +++ D DP S RIA V ++ E E+ L+L ++ K
Sbjct: 91 GDVVRISDLDDPGSGRIARLLRTVKNLMVQQPVKQEEILENTLVLVPLLKEK 142
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 193 LKRFPSSKSISQTARSQRAHQSESACGTIVQC 98
LK+F ++S + +++ Q S CGT+V C
Sbjct: 349 LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDC 380
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Frame = +3
Query: 312 GVSLVSRNFVFLDNDFTLLPAFRTTLQKDFGASIKVLDFSDP-NSARI-ANTYIEK-SGG 482
G + + N V+++ + P + F AS +DF R+ NT+ + +
Sbjct: 118 GPKIAAVNGVWMEQSLSCNPDWEDLFLNFFKASFAKVDFRHKAEEVRLDVNTWASRHTND 177
Query: 483 RVSNVL-RSENFQESRLILTNVISFKGLWGLPFNKF*TTELEPFY 614
+ +L R + I N + FKG W F+K T + +PF+
Sbjct: 178 LIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRD-KPFH 221
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,132,193
Number of Sequences: 28952
Number of extensions: 326373
Number of successful extensions: 807
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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