Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30912
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    56   2e-10
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    56   2e-10
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    54   6e-10
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    26   0.20 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   3.2  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   4.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.6  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   7.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.7  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 56.0 bits (129), Expect = 2e-10
 Identities = 23/41 (56%), Positives = 34/41 (82%)
 Frame = +3

Query: 3   EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 125
           E++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRI
Sbjct: 131 EDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRI 171



 Score = 36.7 bits (81), Expect = 1e-04
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = +1

Query: 130 KVQKLLQDFFNGKELNKSINPDE 198
           KVQ+L+ ++FNGKE  +SINPDE
Sbjct: 173 KVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 56.0 bits (129), Expect = 2e-10
 Identities = 23/41 (56%), Positives = 34/41 (82%)
 Frame = +3

Query: 3   EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 125
           E++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRI
Sbjct: 131 EDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRI 171



 Score = 36.7 bits (81), Expect = 1e-04
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = +1

Query: 130 KVQKLLQDFFNGKELNKSINPDE 198
           KVQ+L+ ++FNGKE  +SINPDE
Sbjct: 173 KVQQLITEYFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 54.4 bits (125), Expect = 6e-10
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = +3

Query: 3   EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 125
           EELN D F  T++PV+K L DA M K QI +IVLVGGSTRI
Sbjct: 130 EELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRI 170



 Score = 42.7 bits (96), Expect = 2e-06
 Identities = 16/23 (69%), Positives = 22/23 (95%)
 Frame = +1

Query: 130 KVQKLLQDFFNGKELNKSINPDE 198
           K+Q+L++DFF+GKELN+ INPDE
Sbjct: 172 KIQQLIKDFFDGKELNRGINPDE 194


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -1

Query: 90  GFEPY-PSWHHGETSPLAPW*T*TDRR 13
           GF P+ PS H G   P  PW T  D R
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYR 494


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 142 LLQDFFNGKELNKSINPDE 198
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 105 PVQYRGFEPYPSWHHGETSPLAP 37
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 479 QLEFTEQVVIFGHSTLTLKYLDEYSGLV 396
           Q    +QV  F HS  ++ +L E  GLV
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 130 WWIRVEPPTSTIS 92
           WW + + P STIS
Sbjct: 245 WWEQQQTPRSTIS 257


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -3

Query: 151 LAGASAPWWIRVEP 110
           +  ++ PWW R +P
Sbjct: 67  VTSSNRPWWERYQP 80


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -3

Query: 151 LAGASAPWWIRVEP 110
           +  ++ PWW R +P
Sbjct: 68  VTSSNRPWWERYQP 81


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -3

Query: 151 LAGASAPWWIRVEP 110
           +  ++ PWW R +P
Sbjct: 68  VTSSNRPWWERYQP 81


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/39 (17%), Positives = 17/39 (43%)
 Frame = -1

Query: 183 RFVELLSIKEILQELLHLGGYEWSHPPVQYRGFEPYPSW 67
           +F+E +  +  +  + +L   +W   P +  G   +  W
Sbjct: 433 KFIEEMLQRNDVYFVTNLQVIQWMQNPTELNGLRDFQEW 471


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/39 (17%), Positives = 17/39 (43%)
 Frame = -1

Query: 183 RFVELLSIKEILQELLHLGGYEWSHPPVQYRGFEPYPSW 67
           +F+E +  +  +  + +L   +W   P +  G   +  W
Sbjct: 440 KFIEEMLQRNDVYFVTNLQVIQWMQNPTELNGLRDFQEW 478


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,244
Number of Sequences: 336
Number of extensions: 2792
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)