Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30912
(567 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 153 2e-38
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 151 5e-38
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 124 1e-29
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 94 1e-20
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 89 4e-19
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 36 0.004
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.029
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 28 0.83
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 3.4
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 3.4
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 26 4.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.7
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 25 7.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 153 bits (370), Expect = 2e-38
Identities = 87/169 (51%), Positives = 100/169 (59%)
Frame = +3
Query: 3 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIHQGAEAPARFL*WKGAQQI 182
EEL ADLFR TMEPVE+ LRD+K+DKA +++IVLVGGSTRI + + + F K +
Sbjct: 301 EELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKS 360
Query: 183 Y*P*RGRSLWCSCPGCYLARXXXXXXXXXXXXXXXXXXXGIATAGGVMTTLIKRNXXXXX 362
P + + L GI TAGGVMT LIKRN
Sbjct: 361 INPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPT 420
Query: 363 XXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGV 509
YSDNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGV
Sbjct: 421 KKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGV 469
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 PQIEVTFDIYANGILNVSA 565
PQIEVTFD+ ANGILNVSA
Sbjct: 470 PQIEVTFDVDANGILNVSA 488
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 151 bits (367), Expect = 5e-38
Identities = 86/169 (50%), Positives = 101/169 (59%)
Frame = +3
Query: 3 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIHQGAEAPARFL*WKGAQQI 182
EEL ADLFR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRI + + + F K +
Sbjct: 301 EELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKS 360
Query: 183 Y*P*RGRSLWCSCPGCYLARXXXXXXXXXXXXXXXXXXXGIATAGGVMTTLIKRNXXXXX 362
P + + L GI TAGGVMT LIKRN
Sbjct: 361 INPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPT 420
Query: 363 XXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGV 509
Y+DNQPGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGV
Sbjct: 421 KKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGV 469
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 509 PQIEVTFDIYANGILNVSA 565
PQIEVTFD+ ANGILNVSA
Sbjct: 470 PQIEVTFDVDANGILNVSA 488
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 124 bits (298), Expect = 1e-29
Identities = 75/169 (44%), Positives = 94/169 (55%)
Frame = +3
Query: 3 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIHQGAEAPARFL*WKGAQQI 182
EE+N DLF+ T++PVE+ L+D+ + K++I DIVLVGGSTRI + E F K ++ I
Sbjct: 333 EEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFFGKKASKGI 392
Query: 183 Y*P*RGRSLWCSCPGCYLARXXXXXXXXXXXXXXXXXXXGIATAGGVMTTLIKRNXXXXX 362
P + + L+ GI T GGVMT LI RN
Sbjct: 393 N-PDEAVAYGAAVQAGVLS--GEEGSDNIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPT 449
Query: 363 XXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGV 509
DNQ VLIQV+EGER +TKDNNLLGKF+L GIPPAPRGV
Sbjct: 450 RKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGV 498
Score = 34.3 bits (75), Expect = 0.013
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 130 KVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 249
KVQ+LL+ FF GK+ +K INPDE +L G++
Sbjct: 375 KVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEE 413
Score = 33.5 bits (73), Expect = 0.022
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 509 PQIEVTFDIYANGILNVSA 565
PQIEVTF++ ANG+L VSA
Sbjct: 499 PQIEVTFEVDANGVLTVSA 517
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 94.3 bits (224), Expect = 1e-20
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Frame = +3
Query: 3 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIHQGAEAPARFL*WKGAQQI 182
E++NA F++T++PV K L+D+K+ KA +HDIVLVGGSTRI + + F + +
Sbjct: 305 EDINATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKS 364
Query: 183 Y*P*RGRSLWCSCPGCYLA-RXXXXXXXXXXXXXXXXXXXGIATAGGVMTTLIKRNXXXX 359
P + + L + G+A G V + RN
Sbjct: 365 INPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIP 424
Query: 360 XXXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVLKL 518
+DNQ V V++GER +N LG+F+LTGIPP PRG +L
Sbjct: 425 TIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAEL 477
Score = 41.9 bits (94), Expect = 6e-05
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +1
Query: 130 KVQKLLQDFFNGKELNKSINPDE 198
KVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 347 KVQRLVSDFFDGRALNKSINPDE 369
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 512 QIEVTFDIYANGILNVSA 565
++E TF++ ANGIL V+A
Sbjct: 476 ELEATFELDANGILKVTA 493
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 89.0 bits (211), Expect = 4e-19
Identities = 54/168 (32%), Positives = 85/168 (50%)
Frame = +3
Query: 3 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIHQGAEAPARFL*WKGAQQI 182
E+L L R T++P +++L+DA + ++I++++LVGG TR+ + E + A+ +
Sbjct: 349 EKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFKREPAKSV 408
Query: 183 Y*P*RGRSLWCSCPGCYLARXXXXXXXXXXXXXXXXXXXGIATAGGVMTTLIKRNXXXXX 362
P ++ + G L+ GI T GGV T LI RN
Sbjct: 409 N-PDEAVAIGAAIQGGVLS----GHVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPT 463
Query: 363 XXXXXXXXYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRG 506
+D Q V I+VF+GER + +DN L+G F+LTGI PAP+G
Sbjct: 464 RKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKG 511
Score = 33.9 bits (74), Expect = 0.017
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +2
Query: 506 RPQIEVTFDIYANGILNVSA 565
+PQIEV+FD+ A+GI+NVSA
Sbjct: 512 QPQIEVSFDVDADGIINVSA 531
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = +3
Query: 3 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 125
E L D+ + +EP+ K+L+ A + ++I+ I+L GG++RI
Sbjct: 337 ESLCKDMEDAAVEPINKALKKANLTFSEINSIILFGGASRI 377
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 33.1 bits (72), Expect = 0.029
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 3 EELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 125
EEL L P+EK+L A + K ++ I +VGG TR+
Sbjct: 309 EELIKPLLERLTPPIEKALELAGIKKEDLYSIEMVGGCTRV 349
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 28.3 bits (60), Expect = 0.83
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 19 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWWVAPLVSTKVQKLLQDFFN 162
ICS LP + W + S PR+ R S ++ WW +T V + Q N
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWWSTTAWTTFVASITQSTAN 184
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 93 RGFEPYPSWHHGETSPLAP 37
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 346 TLPSPLNRLRHSPPTLITNPEYSSKYLR 429
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 283 TSSNSRSCTSQTCHRAR*QPGQLHHKLRP 197
T S +R C S +C R Q +LH K++P
Sbjct: 381 TCSRNRLCYSISCPRRLEQQARLHLKVQP 409
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 27 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIHQG 134
RST+E +E S R +M K I ST +H G
Sbjct: 526 RSTIEYIETSTRVYEMPKDTIPSRFKTSISTEVHDG 561
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 491 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLS 369
WD G+ ++ I GHS +L L+ S L +S
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLENGSVLTANYNSASIS 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,362,497
Number of Sequences: 5004
Number of extensions: 47867
Number of successful extensions: 181
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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