Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30912
         (567 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    29   0.14 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.56 
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          26   0.99 
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.3  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     24   4.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   5.3  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    23   6.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   9.2  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 28.7 bits (61), Expect = 0.14
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 213 TISYGLVRVNRFVELLSIKEILQELLHLGGYEWSHPPVQYRGFEPY 76
           T+ Y L+R N  V    IKE+  + + LG +E+ H P   +G  PY
Sbjct: 99  TLWYNLLRWN--VTAYFIKELPPDAMTLGNHEFDHSP---KGLAPY 139


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 141  LLHLGGYEWSHPPVQYRGFEPYPSWHHGE 55
            ++ LG Y      + Y GFEPY   H G+
Sbjct: 1322 IVDLGPYRLVDEMISYYGFEPYERNHFGK 1350


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 0.99
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 286 VTSSNSRSCTSQTCHRAR*QPGQLHHKLRPRQ 191
           VTS      TS+   + + QP QLH +L+ +Q
Sbjct: 198 VTSPQPSQVTSRQLQQQQLQPNQLHQQLQQQQ 229


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 45  VEKSLRDAKMDKAQIHDIVLVGGSTRIHQGAEAPA 149
           +++S+RDAK+  A      +V  S ++HQ A   A
Sbjct: 721 IDRSMRDAKLVIAHAKTEFIVISSHKVHQKASIMA 755


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 151 LAGASAPWWIRVEP 110
           LA  S PWW R +P
Sbjct: 75  LADGSRPWWERYQP 88


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -2

Query: 407 SGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSR 306
           +G+V+ +GG C  L   D  ++  + G D+++ R
Sbjct: 48  AGIVLGMGGNCKLLSRCDNVISYIKNGKDSATIR 81


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 521 PQFEDATRRRWDPGQLEFT 465
           P F + T   WDPG+ + T
Sbjct: 267 PLFRNVTIAAWDPGKFDQT 285


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 9.2
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 322 TPPAVAIP--RERGVTSSNSRSCTSQTCHRAR*QPGQ 218
           +PPAVA P    R  T++ + + T++    A+ +P +
Sbjct: 561 SPPAVATPPSTSRARTATRTATTTTRALRSAKKEPAE 597


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,640
Number of Sequences: 2352
Number of extensions: 11978
Number of successful extensions: 41
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)