Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30911
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.84 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.4  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    23   3.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.5  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 532 LLMGASLRLN*RAKKSKTGVSPILTPRPQ 618
           LL+G S+R+    K+ K   SP+  P P+
Sbjct: 189 LLIGPSIRITPAKKRIKLEQSPLCPPAPR 217


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 471 LPGFLIFHSFGGGPALGFTCLI 536
           L G +I HS+GGG   G   L+
Sbjct: 656 LRGSIIDHSYGGGFGFGSAVLL 677


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 471 LPGFLIFHSFGGGPALGFTCLI 536
           L G +I HS+GGG   G   L+
Sbjct: 694 LRGSIIDHSYGGGFGFGSAVLL 715


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 234 LQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQL 335
           L+  R+  H+    + D+EPTV         RQL
Sbjct: 234 LEERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 205 RWSCLWASGHQAGCRAPGSKAPSRHYR 125
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 205 RWSCLWASGHQAGCRAPGSKAPSRHYR 125
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 205 RWSCLWASGHQAGCRAPGSKAPSRHYR 125
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 176 MARCPQTRPSGVETILSTLSSARPELE 256
           +A+ P      + T+ ST+SSA+PE E
Sbjct: 7   VAQLPHHLSPNMPTMDSTVSSAKPEPE 33


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 517 RAGPPPKEWK 488
           R  PPP++WK
Sbjct: 413 RTSPPPEDWK 422


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,427
Number of Sequences: 438
Number of extensions: 4895
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)