Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30911
(651 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 171 3e-43
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 171 3e-43
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 171 3e-43
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 171 3e-43
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 171 5e-43
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 171 5e-43
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 164 4e-41
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 107 6e-24
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 105 2e-23
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 105 2e-23
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 104 4e-23
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 104 6e-23
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 104 6e-23
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 102 2e-22
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 102 2e-22
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 100 1e-21
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 69 4e-12
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 68 5e-12
At4g38980.1 68417.m05523 expressed protein 31 0.88
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 29 2.0
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 29 2.0
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 29 2.0
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 29 2.0
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.0
At2g24030.2 68415.m02870 expressed protein and genefinder 29 3.5
At2g24030.1 68415.m02871 expressed protein and genefinder 29 3.5
At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putativ... 27 8.2
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 8.2
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 27 8.2
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 8.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 171 bits (417), Expect = 3e-43
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
TIGKEIVDL LDRIRKLAD CTGL GFL+F++ GGG G L+
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 101 bits (241), Expect = 5e-22
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 121 QIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
Q+GNACWELYC EHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG P
Sbjct: 15 QVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVP 63
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 171 bits (417), Expect = 3e-43
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
TIGKEIVDL LDRIRKLAD CTGL GFL+F++ GGG G L+
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 101 bits (241), Expect = 5e-22
Identities = 41/49 (83%), Positives = 44/49 (89%)
Frame = +1
Query: 121 QIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
Q+GNACWELYC EHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG P
Sbjct: 15 QVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVP 63
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 171 bits (417), Expect = 3e-43
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
TIGKEIVDL LDRIRKLAD CTGL GFL+F++ GGG G L+
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 102 bits (244), Expect = 2e-22
Identities = 41/49 (83%), Positives = 45/49 (91%)
Frame = +1
Query: 121 QIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
Q+GNACWELYC EHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG P
Sbjct: 15 QVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVP 63
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 171 bits (417), Expect = 3e-43
Identities = 79/105 (75%), Positives = 87/105 (82%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
TIGKEIVDL LDRIRKLAD CTGL GFL+F++ GGG G L+
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 102 bits (244), Expect = 2e-22
Identities = 41/49 (83%), Positives = 45/49 (91%)
Frame = +1
Query: 121 QIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
Q+GNACWELYC EHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG P
Sbjct: 15 QVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVP 63
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (415), Expect = 5e-43
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
T+GKEIVDL LDR+RKLAD CTGL GFL+F++ GGG G L+
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 87.8 bits (208), Expect = 5e-18
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +1
Query: 121 QIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
Q+GN+CWELYC EHGIQPDG MP+D T+G D+FNTFFSETGAG P
Sbjct: 15 QVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVP 63
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 171 bits (415), Expect = 5e-43
Identities = 77/105 (73%), Positives = 87/105 (82%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F + KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
T+GKEIVDL LDR+RKLAD CTGL GFL+F++ GGG G L+
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 87.8 bits (208), Expect = 5e-18
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +1
Query: 121 QIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
Q+GN+CWELYC EHGIQPDG MP+D T+G D+FNTFFSETGAG P
Sbjct: 15 QVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVP 63
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 164 bits (399), Expect = 4e-41
Identities = 73/105 (69%), Positives = 86/105 (81%)
Frame = +3
Query: 222 FQHFLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 401
F F S +HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 402 TIGKEIVDLVLDRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
T+G+EIVD L+R+RKLAD CTGL GFL+F++ GGG G L+
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLL 153
Score = 84.2 bits (199), Expect = 7e-17
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 121 QIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
Q+GN+CWELYC EHGIQPDG MP+D T+G D+FNTFFSET +G P
Sbjct: 15 QVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVP 63
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 107 bits (257), Expect = 6e-24
Identities = 46/94 (48%), Positives = 63/94 (67%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 RYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 117
Query: 435 DRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
D +RK A+ C L GF + HS GGG G L+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGSTYP 267
+QIG+ WE+ C EHGI P G + +G D + N +++E G P
Sbjct: 14 NQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEASCGRYVP 61
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 105 bits (253), Expect = 2e-23
Identities = 46/94 (48%), Positives = 63/94 (67%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 435 DRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
D +RK A+ C L GF + HS GGG G L+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
+QIG+ WE+ EHGI G+ D + + N +++E G P
Sbjct: 14 NQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGRYVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 105 bits (253), Expect = 2e-23
Identities = 45/94 (47%), Positives = 63/94 (67%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 435 DRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
D +RK A+ C L GF + HS GGG G L+
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 152
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
+QIG+ WE+ C EHG+ P G+ D + + N +++E G P
Sbjct: 14 NQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGRYVP 62
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 104 bits (250), Expect = 4e-23
Identities = 46/94 (48%), Positives = 62/94 (65%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 RFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 435 DRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
D +RK A+ C L GF + HS GGG G L+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
+QIG WE+ C EHGI G+ + + + N +++E G P
Sbjct: 14 NQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGRFVP 61
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 104 bits (249), Expect = 6e-23
Identities = 45/94 (47%), Positives = 63/94 (67%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 435 DRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
D +RK A+ C L GF + HS GGG G L+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 35.9 bits (79), Expect = 0.023
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
+QIG WE+ C EHGI GQ D + + N +F+E G P
Sbjct: 14 NQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGKYVP 61
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 104 bits (249), Expect = 6e-23
Identities = 44/94 (46%), Positives = 63/94 (67%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 59 RYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 118
Query: 435 DRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
D +RK A+ C L GF + HS GGG G L+
Sbjct: 119 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 152
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
+QIG+ WE+ C EHGI G+ D T + N +++E G P
Sbjct: 14 NQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVP 62
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 102 bits (244), Expect = 2e-22
Identities = 45/94 (47%), Positives = 61/94 (64%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 RFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 435 DRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
D +RK A+ C L GF + HS GGG G L+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
+QIG WE+ C EHGI P G+ D + + N +++E G P
Sbjct: 14 NQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGRFVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 102 bits (244), Expect = 2e-22
Identities = 45/94 (47%), Positives = 61/94 (64%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 RFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 435 DRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
D +RK A+ C L GF + HS GGG G L+
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
+QIG WE+ C EHGI P G+ D + + N +++E G P
Sbjct: 14 NQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGRFVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 100 bits (239), Expect = 1e-21
Identities = 44/94 (46%), Positives = 62/94 (65%)
Frame = +3
Query: 255 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 434
K+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 58 KYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Query: 435 DRIRKLADQCTGLPGFLIFHSFGGGPALGFTCLI 536
D +RK A+ L GF + HS GGG G L+
Sbjct: 118 DVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLL 151
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGSTYP 267
+QIG WE+ C EHGI GQ D + + + +F+E G P
Sbjct: 14 NQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGKYVP 61
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = +3
Query: 231 FLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 404
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ 110
Query: 405 IGKEIVDLVLDRIRKLADQCTGLPGFLIFHSFGGGPALG 521
GK + + ++D I + AD L GF++ HS GG G
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSG 148
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFF 237
+QIG W+ C EHGI DG + T GG D + FF
Sbjct: 15 NQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 68.1 bits (159), Expect = 5e-12
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = +3
Query: 231 FLQRDRSWKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 404
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ 110
Query: 405 IGKEIVDLVLDRIRKLADQCTGLPGFLIFHSFGGGPALG 521
GK + + ++D I + AD L GF++ HS GG G
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSG 148
Score = 31.9 bits (69), Expect = 0.38
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 118 SQIGNACWELYCPEHGIQPDGQMPTDKTIGGGDDSFNTFF 237
+QIG W+ C EHGI DG + T GG D + FF
Sbjct: 15 NQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At4g38980.1 68417.m05523 expressed protein
Length = 280
Score = 30.7 bits (66), Expect = 0.88
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 10/106 (9%)
Frame = -2
Query: 500 EGVEDQESWQTGTLVSELADSVQNQIY--DFLS----NXXXXXXXXXGRIFLTSNKLFWM 339
E +E+ S G E SV +Q++ DF+S + + +TS ++F +
Sbjct: 156 ESIEEDGSVSNGEAKEEKPASVSSQVFKDDFMSTYVEDNAEDCNVTEDPVKVTSQEIFKV 215
Query: 338 KQLSVCASAD----LINNSRFKIDEDSTGYVLPAPVSLKKVLKESS 213
L V D L+ + +DE ST LP P++ +V+ E S
Sbjct: 216 WDLEVVGDNDEEDGLVLQLKKALDESSTVQPLPQPLNDDQVVSEKS 261
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 243 LAEESVERIVSTPDGLVCGHLAIRLDAVLRAVKLPAGITDLGLRLGP 103
+A+ V R V T +G + +DA+++A KLP I +G+ GP
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGP 296
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 243 LAEESVERIVSTPDGLVCGHLAIRLDAVLRAVKLPAGITDLGLRLGP 103
+A+ V R V T +G + +DA+++A KLP I +G+ GP
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGP 296
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 243 LAEESVERIVSTPDGLVCGHLAIRLDAVLRAVKLPAGITDLGLRLGP 103
+A+ V R V T +G + +DA+++A KLP I +G+ GP
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGP 296
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 243 LAEESVERIVSTPDGLVCGHLAIRLDAVLRAVKLPAGITDLGLRLGP 103
+A+ V R V T +G + +DA+++A KLP I +G+ GP
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLVGVGDGP 296
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 248 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSGQ*SSQQALPI 123
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g24030.2 68415.m02870 expressed protein and genefinder
Length = 374
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/72 (36%), Positives = 32/72 (44%)
Frame = -2
Query: 365 LTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLPAPVSLKKVLKESSPPPMVLSVG 186
L SNK +Q V A AD + R K ++ TG V K KES M L G
Sbjct: 131 LESNK----EQFIVLARADPVGEKR-KAEDIQTGLNEDLQVKRPKA-KESEAKAMSLETG 184
Query: 185 IWPSGWMPCSGQ 150
S +PCSG+
Sbjct: 185 EIVSSKVPCSGK 196
>At2g24030.1 68415.m02871 expressed protein and genefinder
Length = 455
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/72 (36%), Positives = 32/72 (44%)
Frame = -2
Query: 365 LTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLPAPVSLKKVLKESSPPPMVLSVG 186
L SNK +Q V A AD + R K ++ TG V K KES M L G
Sbjct: 212 LESNK----EQFIVLARADPVGEKR-KAEDIQTGLNEDLQVKRPKA-KESEAKAMSLETG 265
Query: 185 IWPSGWMPCSGQ 150
S +PCSG+
Sbjct: 266 EIVSSKVPCSGK 277
>At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 535
Score = 28.7 bits (61), Expect = 3.5
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2
Query: 101 VGPSRSPRSVMPAGSFTARSTASSLMARCPQTRPSGVETILSTLSSARPELEARTP 268
V S SPR + + S S SS R Q+ SG ET+ S+ S++ + TP
Sbjct: 195 VPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTP 250
>At4g24560.1 68417.m03520 ubiquitin-specific protease 16, putative
(UBP16) similar to ubiquitin-specific protease 16
GI:11993477 [Arabidopsis thaliana]
Length = 1008
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 134 PAGSFTARSTASSLMARCPQTRPSGVETILSTLSSARPELEARTP 268
P + ++ AS+ +R P + + TI ++S++ PEL + TP
Sbjct: 852 PRLAVCTKTEASNKKSRVPLPKANEKSTISRSVSTSSPELSSNTP 896
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 8.2
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 447 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 358
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 302 NNSRFKIDEDSTGYVLPAPVSLKKVLKESSPPPM 201
N R K S+ L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 8.2
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 447 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 358
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,889,493
Number of Sequences: 28952
Number of extensions: 376252
Number of successful extensions: 1237
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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