Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30910
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10351-1|CAA71377.1|  711|Homo sapiens nuclear protein SDK3 prot...    31   3.0  
AF112222-1|AAF17209.1|  717|Homo sapiens nuclear protein SDK3 pr...    31   3.0  
BC025316-1|AAH25316.1|  509|Homo sapiens phospholipase A2, group...    31   5.2  
AF220490-1|AAF44746.1|  509|Homo sapiens group III secreted phos...    31   5.2  
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot...    31   5.2  
AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.    31   5.2  
DQ840901-1|ABI74428.1|  127|Homo sapiens immunoglobulin heavy ch...    30   6.9  
Y09703-1|CAA70874.1|  586|Homo sapiens MEMA protein.                   30   9.1  
M35857-1|AAA63262.1|  346|Homo sapiens TNFR1 protein.                  30   9.1  

>Y10351-1|CAA71377.1|  711|Homo sapiens nuclear protein SDK3
           protein.
          Length = 711

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 21/58 (36%), Positives = 33/58 (56%)
 Frame = +3

Query: 3   SSNSL*IACSESSGSISWKSANDSRSPTRMTFSFNGIEGTETGRGRDSSNATQSKRSR 176
           SS+S   + S SSGS S   ++ SRS +  + S +G  G ++     SS+ ++S RSR
Sbjct: 574 SSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSGRDSSSSTSSSSESRS-RSR 630


>AF112222-1|AAF17209.1|  717|Homo sapiens nuclear protein SDK3
           protein.
          Length = 717

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 21/58 (36%), Positives = 33/58 (56%)
 Frame = +3

Query: 3   SSNSL*IACSESSGSISWKSANDSRSPTRMTFSFNGIEGTETGRGRDSSNATQSKRSR 176
           SS+S   + S SSGS S   ++ SRS +  + S +G  G ++     SS+ ++S RSR
Sbjct: 580 SSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSGRDSSSSTSSSSESRS-RSR 636


>BC025316-1|AAH25316.1|  509|Homo sapiens phospholipase A2, group
           III protein.
          Length = 509

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -2

Query: 594 QPRLQFAAGAVCLHTRASSSFMAGEGPRKSLSI*ILLPNARAYATKRCSPTGGR 433
           +P L  A GA+C H  A  SF+   GP    ++  L     A      SP G R
Sbjct: 76  EPELTAAYGALCAHETAWGSFIHTPGPELQRALATLQSQWEACRALEESPAGAR 129


>AF220490-1|AAF44746.1|  509|Homo sapiens group III secreted
           phospholipase A2 protein.
          Length = 509

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -2

Query: 594 QPRLQFAAGAVCLHTRASSSFMAGEGPRKSLSI*ILLPNARAYATKRCSPTGGR 433
           +P L  A GA+C H  A  SF+   GP    ++  L     A      SP G R
Sbjct: 76  EPELTAAYGALCAHETAWGSFIHTPGPELQRALATLQSQWEACRALEESPAGAR 129


>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
           precursor protein.
          Length = 1253

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 33  ESSGSISWKSANDSRSPTRMTFSFNGIEGTETGRGRDSSNA 155
           ES+G+    S +D+ S +R   S+N  E  + G G DS  A
Sbjct: 470 ESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGA 510


>AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.
          Length = 788

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 33  ESSGSISWKSANDSRSPTRMTFSFNGIEGTETGRGRDSSNA 155
           ES+G+    S +D+ S +R   S+N  E  + G G DS  A
Sbjct: 8   ESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGA 48


>DQ840901-1|ABI74428.1|  127|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 127

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = -3

Query: 476 PARTLQSDAAQLVGGHYEVSGHSIRLRHAVSADDNFATLTQVVAADWVEAEQLFGCLRQF 297
           P + L+  A    GG Y+    S++ R A+S DD+   L   + +  +E   ++ C R  
Sbjct: 41  PGKGLEWVAVVSSGGEYKYYADSVKGRFAISRDDSKNALYLQLTSLRLEDTAIYYCARAL 100

Query: 296 NGY 288
           + Y
Sbjct: 101 SSY 103


>Y09703-1|CAA70874.1|  586|Homo sapiens MEMA protein.
          Length = 586

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = +3

Query: 3   SSNSL*IACSESSGSISWKSANDSRSPTRMTFSFNGIEGTETGRGRDSSNATQSK-RSR 176
           SS+S   + S SSGS S   ++ SRS +  + S +G    ++     +S++++S+ RSR
Sbjct: 447 SSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSTSSSSESRSRSR 505


>M35857-1|AAA63262.1|  346|Homo sapiens TNFR1 protein.
          Length = 346

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 24  ACSESSGSI-SWKSANDSRSPTRMTFSFNGIEGTETGRGRDSSNATQS 164
           A S SS S+ S  SA D R+PTR      G+E +  G  R S+ ++ S
Sbjct: 208 APSSSSSSLESSASALDRRAPTRNQPQAPGVEASGAGEARTSTGSSDS 255


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,189,689
Number of Sequences: 237096
Number of extensions: 2770144
Number of successful extensions: 6740
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6739
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)