Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30910
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094708-1|AAM11061.1|  708|Drosophila melanogaster GH13165p pro...    33   0.28 
AE013599-3771|AAF47136.1|  708|Drosophila melanogaster CG3121-PA...    33   0.28 
AJ130871-1|CAA10224.1| 1464|Drosophila melanogaster Bazooka prot...    31   1.1  

>AY094708-1|AAM11061.1|  708|Drosophila melanogaster GH13165p
           protein.
          Length = 708

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 17/66 (25%), Positives = 36/66 (54%)
 Frame = -1

Query: 223 TLAQPLLWMRLKNIVTRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEME 44
           +LA P+ W+ +++ +  ++   V +DE +       ++ L LK+ ++GE E   + +E E
Sbjct: 491 SLATPVAWVHVRSNILNQQGRVVWYDEEKARKEREKALALYLKMQMLGEMEEEVEEEEDE 550

Query: 43  PELSEQ 26
            E  E+
Sbjct: 551 EEGEEE 556


>AE013599-3771|AAF47136.1|  708|Drosophila melanogaster CG3121-PA
           protein.
          Length = 708

 Score = 33.5 bits (73), Expect = 0.28
 Identities = 17/66 (25%), Positives = 36/66 (54%)
 Frame = -1

Query: 223 TLAQPLLWMRLKNIVTRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQEME 44
           +LA P+ W+ +++ +  ++   V +DE +       ++ L LK+ ++GE E   + +E E
Sbjct: 491 SLATPVAWVHVRSNILNQQGRVVWYDEEKARKEREKALALYLKMQMLGEMEEEVEEEEDE 550

Query: 43  PELSEQ 26
            E  E+
Sbjct: 551 EEGEEE 556


>AJ130871-1|CAA10224.1| 1464|Drosophila melanogaster Bazooka protein
           protein.
          Length = 1464

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 19/36 (52%), Positives = 23/36 (63%)
 Frame = +2

Query: 416 RKPHSDRPPVGLHRFVAYARALGNKIQILRLFRGPS 523
           RKPH+   PVG    VA  R LG KIQI+ L +GP+
Sbjct: 420 RKPHA--APVGTSLQVANTRKLGRKIQIM-LKKGPN 452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,052,936
Number of Sequences: 53049
Number of extensions: 817177
Number of successful extensions: 2216
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2216
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)