Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30908
(574 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 184 1e-45
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 173 3e-42
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 167 1e-40
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 122 5e-27
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 120 2e-26
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 120 2e-26
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 113 2e-24
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 109 6e-23
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 108 1e-22
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 107 2e-22
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 104 1e-21
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 104 1e-21
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 101 1e-20
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 95 8e-19
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 94 2e-18
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 86 5e-16
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 83 6e-15
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 55 1e-06
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 52 1e-05
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 51 2e-05
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 51 2e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 51 2e-05
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 51 2e-05
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 50 3e-05
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 49 7e-05
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 49 7e-05
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 48 2e-04
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 46 6e-04
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 46 6e-04
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 46 8e-04
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 46 8e-04
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 46 8e-04
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 46 8e-04
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 46 8e-04
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 46 8e-04
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 45 0.001
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 45 0.001
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 45 0.001
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 44 0.003
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 44 0.003
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 43 0.006
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 42 0.008
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 42 0.010
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 42 0.014
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 42 0.014
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.014
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 42 0.014
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 41 0.018
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 41 0.024
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 40 0.041
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 40 0.041
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 40 0.055
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 40 0.055
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 40 0.055
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 40 0.055
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 39 0.096
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 39 0.096
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 39 0.096
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.13
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.22
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.22
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 38 0.22
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 0.29
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 36 0.51
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 0.51
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 36 0.68
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.89
UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response regul... 35 1.2
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 35 1.6
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 2.1
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 34 2.1
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 34 2.1
UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep: P... 34 2.7
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.8
UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3; ... 33 4.8
UniRef50_P35825 Cluster: S-layer protein precursor; n=1; Geobaci... 33 4.8
UniRef50_Q9Z543 Cluster: Putative DNA-binding protein; n=1; Stre... 33 6.3
UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|R... 33 6.3
UniRef50_A4ECN1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.3
UniRef50_Q8HIS1 Cluster: Ribosomal protein L29; n=1; Monosiga br... 33 6.3
UniRef50_Q54QQ1 Cluster: Protein serine/threonine kinase; n=2; D... 33 6.3
UniRef50_P31397 Cluster: Pheromone M-factor receptor; n=1; Schiz... 33 6.3
UniRef50_A7PDE5 Cluster: Chromosome chr17 scaffold_12, whole gen... 32 8.3
UniRef50_A4HSX0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
UniRef50_Q8Y221 Cluster: LPS-assembly protein precursor; n=7; Bu... 32 8.3
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 184 bits (449), Expect = 1e-45
Identities = 86/93 (92%), Positives = 87/93 (93%)
Frame = +3
Query: 255 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 434
NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHIGK
Sbjct: 162 NRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGK 221
Query: 435 ASTVKRGTSAGRKVGLIAARRTGRIVEGKTDTK 533
ASTVKRGTSAGRKVGLIAARRTGRI GK D+K
Sbjct: 222 ASTVKRGTSAGRKVGLIAARRTGRIRGGKGDSK 254
Score = 141 bits (341), Expect = 1e-32
Identities = 62/83 (74%), Positives = 72/83 (86%)
Frame = +1
Query: 16 LYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 195
++TGQFVYCG+KATL++GNVMP+ M EGTI+CNLEEK GDRGRLAR SGN+ATVI HN
Sbjct: 82 MHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQ 141
Query: 196 DAKRTRVKLPSGAKKVLPSRTEA 264
D K+TRVKLPSGAKKV+PS A
Sbjct: 142 DTKKTRVKLPSGAKKVVPSANRA 164
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 173 bits (420), Expect = 3e-42
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +3
Query: 255 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 434
NR +VGIVAGGGRIDKP+LKAGRAYHKYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGK
Sbjct: 138 NRAIVGIVAGGGRIDKPMLKAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGK 197
Query: 435 ASTVKRGTSAGRKVGLIAARRTGRI 509
ASTV+R TSAGRKVGLIAARRTGR+
Sbjct: 198 ASTVRRDTSAGRKVGLIAARRTGRL 222
Score = 80.6 bits (190), Expect = 2e-14
Identities = 43/86 (50%), Positives = 54/86 (62%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
+ +YTGQF+YCGKKA L++ RG+LARASGN+ATVI
Sbjct: 79 TEGMYTGQFIYCGKKANLQI------------------------RGKLARASGNYATVIS 114
Query: 187 HNPDAKRTRVKLPSGAKKVLPSRTEA 264
HNPD K++RVKLPSG+KKV+PS A
Sbjct: 115 HNPDTKKSRVKLPSGSKKVIPSANRA 140
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 167 bits (407), Expect = 1e-40
Identities = 76/95 (80%), Positives = 82/95 (86%)
Frame = +3
Query: 255 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 434
NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK
Sbjct: 162 NRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGK 221
Query: 435 ASTVKRGTSAGRKVGLIAARRTGRIVEGKTDTKKE 539
ST++R AGRKVGLIAARRTGR+ KT +KE
Sbjct: 222 PSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKE 256
Score = 136 bits (330), Expect = 3e-31
Identities = 61/86 (70%), Positives = 72/86 (83%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
+ ++TGQFVYCGKKA L +GNV+PVG M EGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 187 HNPDAKRTRVKLPSGAKKVLPSRTEA 264
HNP+ K+TRVKLPSG+KKV+ S A
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRA 164
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 122 bits (295), Expect = 5e-27
Identities = 57/84 (67%), Positives = 64/84 (76%)
Frame = +3
Query: 255 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 434
+R +GI AG GRI+KPI+KAG AYHK+KVK WP VRGVAMN V+HP GGG HQH G+
Sbjct: 152 SRATIGIPAGAGRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGR 211
Query: 435 ASTVKRGTSAGRKVGLIAARRTGR 506
STV R GRKVG IAARRTGR
Sbjct: 212 PSTVARTAPPGRKVGHIAARRTGR 235
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/86 (39%), Positives = 54/86 (62%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
+ +Y GQ + G A E GN++P+G + EGT V N+E + GD G+LAR +G++A V+G
Sbjct: 71 AEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVG 130
Query: 187 HNPDAKRTRVKLPSGAKKVLPSRTEA 264
+T ++LPSG K +P+ + A
Sbjct: 131 R--AGAKTILRLPSGKDKEVPNDSRA 154
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 120 bits (289), Expect = 2e-26
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = +1
Query: 4 CSRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVI 183
C+ LY+GQ++YCG KA+L +GNV+P+G EGT+VCN+E K GDRG +ARASGN+ATVI
Sbjct: 69 CAEGLYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVI 128
Query: 184 GHNPDAKRTRVKLPSGAK 237
HN D + TR++LPSGAK
Sbjct: 129 SHNADNETTRIRLPSGAK 146
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 120 bits (289), Expect = 2e-26
Identities = 55/83 (66%), Positives = 62/83 (74%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 437
R +VG+VAGGG +KP+LKAG Y KYKVK WP+VRGVAMN V HPHGGG HQ + +
Sbjct: 152 RAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRP 211
Query: 438 STVKRGTSAGRKVGLIAARRTGR 506
STV R GRKVG IAARRTGR
Sbjct: 212 STVSRNAPPGRKVGHIAARRTGR 234
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%)
Frame = +1
Query: 10 RSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGH 189
+ L GQ + GK A + GN++ VG + EGTI+ N+E+ GD G+ AR++G + V+G
Sbjct: 71 QGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGK 130
Query: 190 NPDAKRTRVKLPS 228
D + VKL S
Sbjct: 131 TGD--KVLVKLSS 141
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 113 bits (273), Expect = 2e-24
Identities = 53/85 (62%), Positives = 60/85 (70%)
Frame = +3
Query: 252 KNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
K R +GI AG GR +KP+LKAG AY+K+K K WP VRGVAMN V HPHGGGNHQ G
Sbjct: 155 KARATIGIAAGAGRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPG 214
Query: 432 KASTVKRGTSAGRKVGLIAARRTGR 506
+TV R G+KVG IAAR TGR
Sbjct: 215 YPTTVARNAPPGQKVGHIAARCTGR 239
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/86 (36%), Positives = 53/86 (61%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
+ +YTGQ V G A GN++P+ A+ EGT + N+E + GD G+LAR+ G +A ++G
Sbjct: 75 AEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVG 134
Query: 187 HNPDAKRTRVKLPSGAKKVLPSRTEA 264
+ ++ ++LPSG K + ++ A
Sbjct: 135 KSGNS--AIIQLPSGKVKQVNAKARA 158
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 109 bits (261), Expect = 6e-23
Identities = 51/83 (61%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 437
R +VG+VAGGG DKP+LKA A++K K + + +P VRGVAMNPVEH HGGGNHQH+GK
Sbjct: 149 RCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKP 208
Query: 438 STV-KRGTSAGRKVGLIAARRTG 503
+TV K+ S +K+GL+ ARRTG
Sbjct: 209 TTVSKKDISQEQKIGLVGARRTG 231
Score = 63.3 bits (147), Expect = 4e-09
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
S +YTGQ + G A +++GN+ + + EG V ++E GD G A +G+++ V+
Sbjct: 65 SEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVN 124
Query: 187 HNPDAKRTRVKLPSGAKKVLPS 252
H + T +K+PSG K + S
Sbjct: 125 HRKETNETVIKIPSGKKLTVSS 146
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 108 bits (259), Expect = 1e-22
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 437
R +G+++GGG+ +KP +KAG+ Y+ + K WP VRGVAMN V+HP GGGNHQ GK
Sbjct: 157 RATIGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKP 216
Query: 438 STVKRGTSAGRKVGLIAARRTGR 506
+T+ RG GRKVG IAAR+TGR
Sbjct: 217 TTIARGDPPGRKVGHIAARKTGR 239
Score = 66.1 bits (154), Expect = 6e-10
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +1
Query: 25 GQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 204
G + CG A ++ GN +P+ + EG + N+E + GD G+ ARA G +AT+I H D
Sbjct: 81 GDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVG 138
Query: 205 RTRVKLPSGAKKVLPSRTEA 264
RT V+LPSG + R A
Sbjct: 139 RTYVQLPSGKVRTFDPRCRA 158
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 107 bits (257), Expect = 2e-22
Identities = 51/84 (60%), Positives = 60/84 (71%)
Frame = +3
Query: 252 KNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
K R +VGIVAG GR+D+P LKAG+ YHK K + +P V VAMNP +HP GGG +H G
Sbjct: 152 KCRAVVGIVAGSGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPG 211
Query: 432 KASTVKRGTSAGRKVGLIAARRTG 503
K +TV R GRKVGLIAARRTG
Sbjct: 212 KPTTVSRNAPPGRKVGLIAARRTG 235
Score = 72.5 bits (170), Expect = 6e-12
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
S + G + CG A ++ GN++P+G + EG +CN+E K D G+ R+SG +ATV+
Sbjct: 72 SEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVT 131
Query: 187 HNPDAKRTRVKLPSGAKKVLPSRTEA 264
H +A RT V +PSG K L + A
Sbjct: 132 H--EATRTAVSMPSGNIKWLNPKCRA 155
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 104 bits (250), Expect = 1e-21
Identities = 46/83 (55%), Positives = 60/83 (72%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 437
R +G+VAGGG+ +KP+LKAG+ Y+K+K +P V+ + HPHGGGNHQHIG
Sbjct: 189 RATIGVVAGGGKYEKPLLKAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGNHQHIGHP 248
Query: 438 STVKRGTSAGRKVGLIAARRTGR 506
STV R + G+KVGLIAARR+GR
Sbjct: 249 STVSRRSPPGQKVGLIAARRSGR 271
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +1
Query: 16 LYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 195
LY + + CG +A GNV+P+ + G VCN+EEK GD G+LAR++G F V+ H+
Sbjct: 108 LYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSHSK 167
Query: 196 DAKRTRVKLPSGAKKVLPS 252
T++KLPS K+L S
Sbjct: 168 YNNVTKLKLPSKKIKILSS 186
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 104 bits (250), Expect = 1e-21
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 252 KNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
KNR M+G +AGGG ++P + AG + +K K +P VRGVA HPHGGG HQH+G
Sbjct: 153 KNRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVG 212
Query: 432 KASTVKRGTSAGRKVGLIAARRTGR 506
++STV R T G KVG IAAR+TGR
Sbjct: 213 QSSTVSRDTPPGAKVGSIAARKTGR 237
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +1
Query: 25 GQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 204
G+ + G K+ +E GNV+ + + +GTIVCN+E+ GD G + +++G ATV H +
Sbjct: 79 GETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG- 137
Query: 205 RTRVKLPSGAKKVLPSRTEA 264
VKLPSG L + A
Sbjct: 138 -VTVKLPSGKFTTLNPKNRA 156
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 101 bits (242), Expect = 1e-20
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = +3
Query: 252 KNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
KNR MVG +AGGG ++P + AG + +++ K +P VRGVA HPHGGG HQH+G
Sbjct: 152 KNRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVG 211
Query: 432 KASTVKRGTSAGRKVGLIAARRTGR 506
++STV R G KVG IAAR+TGR
Sbjct: 212 QSSTVSRNAPPGAKVGSIAARKTGR 236
Score = 51.6 bits (118), Expect = 1e-05
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +1
Query: 25 GQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 204
G + G K+ + GNV+ V + +GT VCN+E+ GD G + +++G ATV H
Sbjct: 78 GSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG- 136
Query: 205 RTRVKLPSGAKKVLPSRTEA 264
+KLPSG L + A
Sbjct: 137 -VVLKLPSGRFSTLNPKNRA 155
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 95.5 bits (227), Expect = 8e-19
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = +3
Query: 252 KNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
+ R VGIVAGGGRI+KP LKAG+ YH+ + K +P VRG AM+P HPHGGG+HQ G
Sbjct: 153 RGRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG 212
Query: 432 KASTVKRGTSAGRKVGLIAARRTGR 506
+ V + G+KVG I +R TGR
Sbjct: 213 --TPVPKTAPPGQKVGFIGSRCTGR 235
Score = 81.8 bits (193), Expect = 1e-14
Identities = 37/88 (42%), Positives = 56/88 (63%)
Frame = +1
Query: 1 HCSRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATV 180
+ + LY GQ V GK A+ + GN+M +G + EGT++ N+E++ GD G+ ARA G +A V
Sbjct: 69 YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVV 128
Query: 181 IGHNPDAKRTRVKLPSGAKKVLPSRTEA 264
IG P+ +T ++LPSG + SR A
Sbjct: 129 IGQKPEENKTIIRLPSGRTVEVDSRGRA 156
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 93.9 bits (223), Expect = 2e-18
Identities = 47/81 (58%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPY-VRGVAMNPVEHPHGGGNHQHIGK 434
R VG+VA G ID PILKAG H + K PY VRGVAMN V HPHGGGNHQH+G+
Sbjct: 148 RATVGVVAASGIIDAPILKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGR 206
Query: 435 ASTVKRGTSAGRKVGLIAARR 497
STV R GRKVG ++ +R
Sbjct: 207 PSTVGRNAPPGRKVGRLSPKR 227
Score = 52.8 bits (121), Expect = 6e-06
Identities = 27/82 (32%), Positives = 40/82 (48%)
Frame = +1
Query: 19 YTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 198
Y GQ + G T+ G + + +G+ V N+E GD G R++G FA V+ H
Sbjct: 71 YVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH--- 127
Query: 199 AKRTRVKLPSGAKKVLPSRTEA 264
R +KLPSG+ + R A
Sbjct: 128 GSRVTLKLPSGSMRDFDPRCRA 149
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 86.2 bits (204), Expect = 5e-16
Identities = 38/83 (45%), Positives = 50/83 (60%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 437
R ++G++AGGGR +KP +KAG Y+ + WP V GV N +HP GG H + K
Sbjct: 154 RAVIGVIAGGGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKP 213
Query: 438 STVKRGTSAGRKVGLIAARRTGR 506
TV + GRKVG I AR+TGR
Sbjct: 214 FTVSKWAPPGRKVGYIGARKTGR 236
Score = 58.8 bits (136), Expect = 8e-08
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +1
Query: 25 GQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 204
G VY GK+A +G++ P+ + EGT + LE GD G+L RASG+FA ++ D
Sbjct: 78 GDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKLGD-- 135
Query: 205 RTRVKLPSGAKKVLPSRTEA 264
+ V+LPSG K L + A
Sbjct: 136 KVIVQLPSGQFKTLSANARA 155
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 82.6 bits (195), Expect = 6e-15
Identities = 40/88 (45%), Positives = 56/88 (63%)
Frame = -3
Query: 497 PASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPS 318
PASSN+T+F SR S D +L+V T+ ML+RVHG+T + WPA+ L+LV+ +
Sbjct: 17 PASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPHAWPAIPLGLILVIGTA 76
Query: 317 SFQNRFVNTSTSSNNTDHASVLDGRTFL 234
QN VN +TSS++TDH+ V G L
Sbjct: 77 GLQNGLVNAATSSHHTDHSPVGRGDDLL 104
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
++ + G + + A ++VGN P+ + EGT++ N+E K G G++AR++G ++G
Sbjct: 108 AKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILG 167
Query: 187 HNPDAKRTRVKLPSG-AKKVL 246
+ D K ++L SG +KVL
Sbjct: 168 KDDDGKYVTLRLTSGEVRKVL 188
Score = 39.5 bits (88), Expect = 0.055
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +3
Query: 339 KVKRNCW----PYVRGVAMNPVEHPHGGG-NHQHIGKASTVKRGTSAGRKVGLIAARRT 500
K RN W P VRG MNP +HPHGGG IG+ S V T G+K + R T
Sbjct: 210 KAGRNRWRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV---TPWGKKALGVKTRNT 265
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +1
Query: 58 LEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 237
++ GN MP+ + EGTIV N+E G G++ARA+G +A V+G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 238 KVLPSRTEA 264
+++ R A
Sbjct: 209 RMIHERCMA 217
Score = 41.9 bits (94), Expect = 0.010
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 360 PYVRGVAMNPVEHPHGGGNHQHIGK 434
P+ RG AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 64 VGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 243
VGN +P+ + GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 244 LPSRTEA 264
+ SR A
Sbjct: 419 IDSRCRA 425
Score = 44.8 bits (101), Expect = 0.001
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 437
R +GIV+ + KAG++ ++ +R P VRGVAMNPV+HPHGGG + G
Sbjct: 424 RATIGIVSNLNHGKRKFNKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGEGRTKGGR 478
Query: 438 STV 446
+V
Sbjct: 479 PSV 481
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = +1
Query: 10 RSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGH 189
+ L G V G +A ++VGN +P+ + GT++ N+E K G G+LAR++G A ++G
Sbjct: 108 KGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQLLG- 166
Query: 190 NPDAKRTRVKLPSGAKKVL 246
+ K V+L SG +++
Sbjct: 167 -KEGKYAIVRLSSGEVRLV 184
Score = 38.3 bits (85), Expect = 0.13
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 312 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ-HIGKASTVK--RGTSAGRKVGL 482
KAGR +++ KR P VRG MNP +HPHGGG + IG S + + G+K
Sbjct: 207 KAGRT--RWQGKR---PTVRGSVMNPNDHPHGGGEGKAPIGHPSPMSPWGKKTLGKKTRN 261
Query: 483 IAARRTGRIVEGKTDTK 533
AR IV G+ K
Sbjct: 262 KKARSNKLIVRGRRPGK 278
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 437
R +GIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG + G
Sbjct: 423 RATIGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNPVDHPHGGGEGRTKGGR 477
Query: 438 STVK---RGTSAGRKVGLIAARR 497
+V + T AG + G+ +R
Sbjct: 478 PSVSPWGKPTKAGFRAGVGVGKR 500
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +1
Query: 61 EVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 240
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 241 VLPSRTEA 264
++ SR A
Sbjct: 417 LIDSRCRA 424
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = +1
Query: 10 RSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGH 189
R G + G + +++GN +P+ M GT + N+E +G G+LARA+G A +I
Sbjct: 106 RGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA- 164
Query: 190 NPDAKRTRVKLPSGAKKVLPSRTEA 264
+ K +KLPSG +++ A
Sbjct: 165 -KEGKSATLKLPSGEVRLISKNCSA 188
Score = 41.5 bits (93), Expect = 0.014
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +3
Query: 354 CW----PYVRGVAMNPVEHPHGGG 413
CW P VRGV MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 50.4 bits (115), Expect = 3e-05
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +1
Query: 61 EVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 240
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 241 VLPSRTEA 264
+ SR A
Sbjct: 353 AVDSRCHA 360
Score = 48.4 bits (110), Expect = 1e-04
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +3
Query: 267 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 446
+GIV+ + + KAG + ++ +R P VRGVAMNPV+HPHGGG + G +V
Sbjct: 362 IGIVSNPSHGTRKLRKAGHS--RWLGRR---PVVRGVAMNPVDHPHGGGEGRTKGGRPSV 416
Query: 447 K---RGTSAGRKVGLIAARR 497
+ T AG + +A+R+
Sbjct: 417 SPWGKPTKAGYRSPSVASRK 436
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 49.2 bits (112), Expect = 7e-05
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVI- 183
S L G FV G + GN +P+ ++ GT+V N+E G G++ RA+G A +I
Sbjct: 201 SHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIK 260
Query: 184 GHNPDAKRTRVKLPSGAKKVLP 249
HN K ++LPSG K P
Sbjct: 261 KHN---KYAILRLPSGELKSFP 279
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +3
Query: 267 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 446
+GIV+ + + KAG + ++ +R P VRGVAMNP++HPHGGG + G +V
Sbjct: 286 IGIVSNLNHFNTDLKKAGAS--RWLGRR---PTVRGVAMNPIDHPHGGGEGRTSGGRPSV 340
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 49.2 bits (112), Expect = 7e-05
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +1
Query: 16 LYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 195
L G V G ++ GN MP+ +M GTI+ N+E G G++AR++G +A ++G
Sbjct: 110 LAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR-- 167
Query: 196 DAKRTRVKLPSGAKKVL 246
D ++L SG ++++
Sbjct: 168 DQGMAILRLNSGEQRLV 184
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 312 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
KAGR+ ++ KR P+VRGVAMNPV+HPHGGG + G
Sbjct: 207 KAGRSV--WRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/58 (34%), Positives = 37/58 (63%)
Frame = +1
Query: 58 LEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 231
++ GN +P+ + G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSG 269
Score = 40.3 bits (90), Expect = 0.031
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +3
Query: 312 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 413
KAGR+ H+ K P VRGVAMN +HPHGGG
Sbjct: 297 KAGRSRHRGKR-----PMVRGVAMNAFDHPHGGG 325
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 64 VGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 243
VGN + + + GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 244 LPSRTEA 264
+ SR A
Sbjct: 381 IDSRCRA 387
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/63 (42%), Positives = 38/63 (60%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 437
R VGIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG + G
Sbjct: 386 RATVGIVSNLHHGKRKLDKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGEGRTKGGR 440
Query: 438 STV 446
+V
Sbjct: 441 PSV 443
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 46.0 bits (104), Expect = 6e-04
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +3
Query: 282 GGGRIDKPILKAGRAYHKYKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIGKASTVK 449
G G + K R + K R+ W P VRGVAMNPV+HPHGGG + KAS
Sbjct: 192 GFGTLGKTSNLMQRNVNLGKAGRSRWLGIRPTVRGVAMNPVDHPHGGGEGKKSKKASPTN 251
Query: 450 RGTS 461
+ S
Sbjct: 252 KWAS 255
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 45.6 bits (103), Expect = 8e-04
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +3
Query: 252 KNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
K R +G V G +++ + KAGR +++ KR P VRG+ MNPV+HP+GGG + G
Sbjct: 190 KCRATIGEVGNGEHMNRKLGKAGR--NRWLGKR---PRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 45.6 bits (103), Expect = 8e-04
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = +3
Query: 270 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVK 449
G G ++ + + AGR+ ++ KR P VRGVAMNP++HPHGGG + G +V
Sbjct: 171 GANLGNTKLFEKLKMAGRS--RWLSKR---PSVRGVAMNPIDHPHGGGEGKTSGGRPSVS 225
Query: 450 RGTSAGRKVGLIAARRTGR 506
+ GR + R+T R
Sbjct: 226 KW---GRLTKNVKTRKTKR 241
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 45.6 bits (103), Expect = 8e-04
Identities = 24/52 (46%), Positives = 32/52 (61%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 413
R +G V ++KAG + +++ KR P VRGVAMNPV+HPHGGG
Sbjct: 165 RACLGQVGNESHFLSSLMKAGES--RWRNKR---PKVRGVAMNPVDHPHGGG 211
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 45.6 bits (103), Expect = 8e-04
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKA 437
R +GIV+ + KAG++ ++ +R P VRGVAMNPV+HPHGGG + G
Sbjct: 185 RATIGIVSNENHGKRNFRKAGQS--RWLGRR---PVVRGVAMNPVDHPHGGGEGRTKGGR 239
Query: 438 STV 446
+V
Sbjct: 240 RSV 242
Score = 37.9 bits (84), Expect = 0.17
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 64 VGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 243
+GN + + + GT++ N+E G + RA+G FA +I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 244 LPSRTEA 264
+ S+ A
Sbjct: 180 INSQCRA 186
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 45.6 bits (103), Expect = 8e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +1
Query: 64 VGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 243
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 244 LPSRTEA 264
+ ++ A
Sbjct: 73 INAKCRA 79
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +3
Query: 252 KNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 413
K R +G V+ K + KAG++ ++ R P VRGVAMNP +HPHGGG
Sbjct: 76 KCRATIGTVSNPSHGTKKLYKAGQS--RWLGIR---PKVRGVAMNPCDHPHGGG 124
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 45.6 bits (103), Expect = 8e-04
Identities = 20/27 (74%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +3
Query: 333 KYKVKRNCWPYVRGVAM-NPVEHPHGG 410
K +KRN W VRGVAM NPVEHPHGG
Sbjct: 411 KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 45.6 bits (103), Expect = 8e-04
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +1
Query: 67 GNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 246
GN +P+ M GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
Score = 38.3 bits (85), Expect = 0.13
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +3
Query: 267 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
VG+ + + + KAGR+ N P VRG+AMN EHPHGGG + G
Sbjct: 280 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +3
Query: 336 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 431
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +3
Query: 336 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 431
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWRGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = -2
Query: 144 TSITHFLFKIAHNGTLSHSSNRHHISNFKSCFLSTINKLACVEASG 7
T++TH + +AHNGTL S R +I+N + L+TI++L V A G
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALG 52
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +3
Query: 360 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 446
P VRGVAMNP++HPHGGG + G S+V
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSGGRSSV 229
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/74 (29%), Positives = 43/74 (58%)
Frame = +1
Query: 25 GQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 204
G + G ++ ++VGN +P+ + T + N+E G G+L R++G+ AT++ D
Sbjct: 139 GDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVKKADDGG 198
Query: 205 RTRVKLPSGAKKVL 246
V+LPSG ++++
Sbjct: 199 YCVVRLPSGEQRLV 212
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 43.6 bits (98), Expect = 0.003
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEG 102
+ S+YTGQFV C KKATL V NV+P+ + EG
Sbjct: 45 AESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 360 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 446
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSGGRPSV 227
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 42.3 bits (95), Expect = 0.008
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +3
Query: 348 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
R P VRGVAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
Score = 35.1 bits (77), Expect = 1.2
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 16 LYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 195
L G + G+ A ++VGN +P+ + GT+V +E K G + AR++G ++
Sbjct: 116 LSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVAKEG 175
Query: 196 DAKRTRVK 219
+ R++
Sbjct: 176 EYATLRMR 183
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 41.9 bits (94), Expect = 0.010
Identities = 25/84 (29%), Positives = 41/84 (48%)
Frame = -2
Query: 264 CLCS*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLSHSS 85
C S W NLL R L IR+V++ + ++ + TSIT+ +F + GT +
Sbjct: 70 CSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGSRA 129
Query: 84 NRHHISNFKSCFLSTINKLACVEA 13
++ + FL+ N+LA V A
Sbjct: 130 QGQNVIGNEGGFLTAANELARVYA 153
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 41.5 bits (93), Expect = 0.014
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +3
Query: 354 CW----PYVRGVAMNPVEHPHGGG 413
CW P VRGV MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
Score = 37.1 bits (82), Expect = 0.29
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 91 MTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRTEA 264
M GT + N+E +G G+LARA+G A +I + K +KLPSG +++ A
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSA 58
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 273 IVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 413
+V G +D +G+A K P VRGV MNPV+HPHGGG
Sbjct: 191 VVGQAGNVDSKNRASGKAGSKRWPGSR--PRVRGVVMNPVDHPHGGG 235
Score = 34.7 bits (76), Expect = 1.6
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +1
Query: 25 GQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 204
G + G A VGN P M GT++ +E G G+ ARA+G A + +
Sbjct: 113 GDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQSARAAGAPAKPVAKEGQSA 172
Query: 205 RTRVKLPSGAKKVLPSRTEA 264
+R LP G + +P A
Sbjct: 173 TSR--LPPGEVRSIPQNRPA 190
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.014
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +3
Query: 354 CW----PYVRGVAMNPVEHPHGGG 413
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 41.5 bits (93), Expect = 0.014
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 294 IDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 410
I+K I K+ +A K + P VRG+AMNPV+HPHGG
Sbjct: 181 IEKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPHGG 217
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 41.1 bits (92), Expect = 0.018
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +3
Query: 258 RGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 413
R VG+V+ I KAGR H R P VRG AMNP +HPHGGG
Sbjct: 197 RATVGVVSNLDHNLVVIGKAGRNRH-----RGIRPTVRGSAMNPNDHPHGGG 243
Score = 38.3 bits (85), Expect = 0.13
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +1
Query: 58 LEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 231
++ G MP+ + EGT V N+E G++AR++G++A ++G + K ++L SG
Sbjct: 130 IKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSG 187
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 40.7 bits (91), Expect = 0.024
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +1
Query: 55 TLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 234
T + GN +P+ + GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 235 KKVLPSRTEAWSVLLLEVD 291
+ + A ++ +D
Sbjct: 294 HRYVSLEAVATIGVVSNID 312
Score = 39.1 bits (87), Expect = 0.072
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +3
Query: 210 KSKATVWSQEGS----AIKNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 377
K KA V Q G +++ +G+V+ ++ + KAGR+ ++ R P VRGV
Sbjct: 282 KKKAIVRLQSGEHRYVSLEAVATIGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGV 336
Query: 378 AMNPVEHPHGGG 413
AMN +HPHGGG
Sbjct: 337 AMNKCDHPHGGG 348
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 39.9 bits (89), Expect = 0.041
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 34 VYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDR 141
+YCGKKATL VGNV+P+ ++ EG + +G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 39.9 bits (89), Expect = 0.041
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
+++L G + G KA L++GN +P+ + G+ + N+E + +G L + + N +I
Sbjct: 98 TKNLKIGSQINFGFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIIL 156
Query: 187 HNPDAKRTRVKLPSGAKKVL 246
D T VKLPSG K+L
Sbjct: 157 MIGDIYVT-VKLPSGEIKLL 175
Score = 38.3 bits (85), Expect = 0.13
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 276 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 440
+ G I + + K + + + K + P +RG AMN V+HPHGGG GKAS
Sbjct: 182 ILGQLEIRRKVNKNIKKHAGFNRKLSIRPKIRGAAMNAVDHPHGGGE----GKAS 232
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.5 bits (88), Expect = 0.055
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 360 PYVRGVAMNPVEHPHGG 410
P VRGVAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
Score = 32.3 bits (70), Expect = 8.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 100 GTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 231
GTI+ N+ + + +++GNFA +I D + ++KLPSG
Sbjct: 140 GTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG 181
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 39.5 bits (88), Expect = 0.055
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -2
Query: 144 TSITHFLFKIAHNGTLSHSSNRHHISNFKSCFLSTINKLACVEA 13
T +TH + +AHNGTL S R +I+N + L+ +++L V A
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHA 62
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 39.5 bits (88), Expect = 0.055
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3
Query: 336 YKVKRNCWPYVRGVAMNPVEHPHGGG 413
YK+K P VRG AMN +HPHGGG
Sbjct: 188 YKIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 39.5 bits (88), Expect = 0.055
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 67 GNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 204
GN +P+ + GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
Score = 37.1 bits (82), Expect = 0.29
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +3
Query: 267 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
VG+ + + + KAGR+ N P VRG+AMN +HPHGGG + G
Sbjct: 311 VGVASNPNHQYRQLGKAGRSRWL-----NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 38.7 bits (86), Expect = 0.096
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 360 PYVRGVAMNPVEHPHGG 410
P VRG+AMNPV+HPHGG
Sbjct: 220 PSVRGIAMNPVDHPHGG 236
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 38.7 bits (86), Expect = 0.096
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +3
Query: 360 PYVRGVAMNPVEHPHGGGNHQH-IGKAS 440
P VRGVAMN +HPHGGG ++ IG++S
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRSS 240
Score = 33.1 bits (72), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +1
Query: 25 GQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 204
G +Y G+ L++GN++P+ + G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKK 166
Query: 205 RTRVKLPSGAKKVL 246
+KLPSG ++L
Sbjct: 167 YVTIKLPSGEIRLL 180
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 38.7 bits (86), Expect = 0.096
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 321 RAYHKYKVKRNC-W-PYVRGVAMNPVEHPHGGGN 416
R K +RN W P VRG+AMN HPHGGGN
Sbjct: 250 RILKKAGTRRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 38.3 bits (85), Expect = 0.13
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 366 VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGL 482
VRGV MNPV+HPHGGG G+A K+ +GL
Sbjct: 11 VRGVVMNPVDHPHGGGE----GRAPIDKKKKKTLNSLGL 45
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.5 bits (83), Expect = 0.22
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +3
Query: 339 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 431
K RN W P+VRG AMN V+H HGGG + G
Sbjct: 405 KAGRNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
Score = 34.7 bits (76), Expect = 1.6
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 46 KKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGH 189
+ TL+ GNV+P+ + G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 37.5 bits (83), Expect = 0.22
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 267 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 413
+G V+ + + KAGR+ ++ +R P VRGVAMN +HPHGGG
Sbjct: 374 IGTVSNKDHQHRRLGKAGRS--RWLGRR---PKVRGVAMNACDHPHGGG 417
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 37.5 bits (83), Expect = 0.22
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +3
Query: 312 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 413
KAGR +Y KR P VRG+AMN +HPHGGG
Sbjct: 305 KAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
Score = 35.9 bits (79), Expect = 0.68
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = +1
Query: 58 LEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 237
L+ GN +P+ + G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 238 KVL 246
+ +
Sbjct: 280 RYI 282
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 0.29
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 366 VRGVAMNPVEHPHGG 410
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 36.3 bits (80), Expect = 0.51
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 67 GNVMPVGAMTEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 225
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 36.3 bits (80), Expect = 0.51
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 360 PYVRGVAMNPVEHPHGG 410
P VRGVAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 35.9 bits (79), Expect = 0.68
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 336 YKVKRNCWPYVRGVAMNPVEHPHGG 410
Y V R P VRG+ NPV+HP+GG
Sbjct: 249 YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 35.5 bits (78), Expect = 0.89
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 67 GNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 246
GN +P+ + GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response
regulator receiver; n=1; Robiginitalea biformata
HTCC2501|Rep: Regulatory protein, LuxR:Response
regulator receiver - Robiginitalea biformata HTCC2501
Length = 536
Score = 35.1 bits (77), Expect = 1.2
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 255 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 431
N G+ + G GR+D P+LKA AY V+ + G + +EH + NH H+G
Sbjct: 355 NEGLKELRDGIGRVDAPLLKAQAAYASGLVR-----FAEGNLQDALEHLNEALNHIHVG 408
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 67 GNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVI 183
G+ PVGA+ GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 34.7 bits (76), Expect = 1.6
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = -3
Query: 425 MLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNNTDHASVLDG 246
MLMVTTTV +L RV + +I A ++ +S Q+ V+T+T+SNNT++ SV
Sbjct: 1 MLMVTTTVEILNRVAMH--HIPLASSY----ASSTTSLQDWLVDTTTASNNTNYGSVGRW 54
Query: 245 RTFL 234
+ FL
Sbjct: 55 QNFL 58
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 2.1
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 360 PYVRGVAMNPVEHPHGGGNHQ-HIGKAS 440
P VRG AMN +HPHGGG + IG+ S
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRS 223
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 34.3 bits (75), Expect = 2.1
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 67 GNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 228
G+ P+GA+ GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 34.3 bits (75), Expect = 2.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 336 YKVKRNCWPYVRGVAMNPVEHPHGGG 413
Y + N P VRG A N +HPHGGG
Sbjct: 194 YNIYYNIKPKVRGKAKNVCDHPHGGG 219
>UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep:
Protein lozenge - Drosophila melanogaster (Fruit fly)
Length = 826
Score = 33.9 bits (74), Expect = 2.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 276 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 425
VAG GR+ + I +G ++H + + + PY +P HPH +H H
Sbjct: 90 VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 4.8
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 112 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 246
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3;
Vibrionales|Rep: Putative uncharacterized protein -
Vibrio splendidus 12B01
Length = 7629
Score = 33.1 bits (72), Expect = 4.8
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -3
Query: 407 TVRMLYRVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNNTDHASVLDGRTFLAP 228
TVR + NT Y+ +FD+ LV+ P + Q FVN + + D + +D +
Sbjct: 6662 TVRSVDTDADNTEYLGTPTSFDVDLVIDPINDQPIFVNVTNIETSEDISVAIDNFSIYDV 6721
Query: 227 DGSF 216
D +F
Sbjct: 6722 DANF 6725
>UniRef50_P35825 Cluster: S-layer protein precursor; n=1;
Geobacillus stearothermophilus|Rep: S-layer protein
precursor - Bacillus stearothermophilus (Geobacillus
stearothermophilus)
Length = 1228
Score = 33.1 bits (72), Expect = 4.8
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 58 LEVGNVMPVGAMTEG-TIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 234
+E G +PV A T G TI L+E + + A N T+ G+N +A + A
Sbjct: 427 VETGKRIPVIASTSGSTITITLKEALVTGKQYKLAINNVKTLTGYNAEAYELVFTANASA 486
Query: 235 KKVLPSRTEAWSVLLLEVDVLTNLF*KLEG 324
V + T L + TN++ KL G
Sbjct: 487 PTVATAPTTLGGTTLSTGSLTTNVWGKLAG 516
>UniRef50_Q9Z543 Cluster: Putative DNA-binding protein; n=1;
Streptomyces coelicolor|Rep: Putative DNA-binding
protein - Streptomyces coelicolor
Length = 303
Score = 32.7 bits (71), Expect = 6.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 357 WPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 491
WPY+R V + E GG +G +T +R SA + VG + A
Sbjct: 9 WPYIRSVRVRVGERTRAGGEFDLMG--TTTRRNASAMKMVGALLA 51
>UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|Rep:
DNA gyrase subunit A - Leptospira interrogans
Length = 834
Score = 32.7 bits (71), Expect = 6.3
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 31 FVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKR- 207
+V C K +GN P G + + + ++ R L GNF ++ G NP A R
Sbjct: 87 YVKCAKIVGEVIGNYHPHGDASVYEALVRMVQEFSLRVPLIDGQGNFGSIDGDNPAAYRY 146
Query: 208 TRVKLPSGAKKVL 246
T +L A+++L
Sbjct: 147 TEARLEKVAEELL 159
>UniRef50_A4ECN1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 577
Score = 32.7 bits (71), Expect = 6.3
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 390 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIVEG 518
VE H G +H +GKA + R T G ++ L+ A + GR+ G
Sbjct: 463 VEVTHLGVSHLTVGKAHILARSTERGVRILLVQAIKEGRLSSG 505
>UniRef50_Q8HIS1 Cluster: Ribosomal protein L29; n=1; Monosiga
brevicollis|Rep: Ribosomal protein L29 - Monosiga
brevicollis
Length = 337
Score = 32.7 bits (71), Expect = 6.3
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Frame = +3
Query: 312 KAGRAYHKYKVKR--------NCWPYVRGVAMNPVEHPHGG 410
K HKY++K N P VRG A NPV+HP GG
Sbjct: 271 KVSNELHKYEIKGKAGTNRLLNNRPKVRGKAQNPVDHPMGG 311
>UniRef50_Q54QQ1 Cluster: Protein serine/threonine kinase; n=2;
Dictyostelium discoideum|Rep: Protein serine/threonine
kinase - Dictyostelium discoideum AX4
Length = 1387
Score = 32.7 bits (71), Expect = 6.3
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = -3
Query: 320 SSFQNRFVNTSTSSNNTDHASVLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRP 141
+S +NTS ++NN + S ++ +F++P S LV L+ P + A + +P
Sbjct: 312 TSTSTNSINTSNNNNNNNSGSNINPSSFISPMSS--LVSLSLSSSPASSAPHSPTLSSQP 369
Query: 140 LSPIFSSRLHTMVPSVIAP 84
SP HT+ P +P
Sbjct: 370 SSP------HTITPITTSP 382
>UniRef50_P31397 Cluster: Pheromone M-factor receptor; n=1;
Schizosaccharomyces pombe|Rep: Pheromone M-factor
receptor - Schizosaccharomyces pombe (Fission yeast)
Length = 365
Score = 32.7 bits (71), Expect = 6.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 319 PAFKIGLSIRPPPATIPTMPLFLMAEPSWLQTVALLLYA 203
P K+GL+ PP + M LF W + VAL+L++
Sbjct: 255 PTTKVGLNDWVPPTVLYLMSLFFSTSGGWTEKVALILWS 293
>UniRef50_A7PDE5 Cluster: Chromosome chr17 scaffold_12, whole genome
shotgun sequence; n=5; eudicotyledons|Rep: Chromosome
chr17 scaffold_12, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 126
Score = 32.3 bits (70), Expect = 8.3
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 366 VRGVAMNPVEHPHGGG 413
VRGV MNPV+HPH G
Sbjct: 70 VRGVVMNPVDHPHRSG 85
>UniRef50_A4HSX0 Cluster: Putative uncharacterized protein; n=1;
Leishmania infantum|Rep: Putative uncharacterized
protein - Leishmania infantum
Length = 3340
Score = 32.3 bits (70), Expect = 8.3
Identities = 23/88 (26%), Positives = 38/88 (43%)
Frame = -3
Query: 323 PSSFQNRFVNTSTSSNNTDHASVLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 144
P S F +T+TS+N T + + +A S T++ LAS + + A A++
Sbjct: 415 PRSPSLSFADTNTSANTTASSPSSHTESTMAFGTSTTVMALASATGTAAMPRLNNAAAKK 474
Query: 143 PLSPIFSSRLHTMVPSVIAPTGITFPTS 60
L + H MVP +A P +
Sbjct: 475 SLMSSAVASPHLMVPQRLASLASRLPAT 502
>UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 348
Score = 32.3 bits (70), Expect = 8.3
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 179 TVAKFPEARARRPLSPIFSSRLHTMVPSVIAPTGITFPTSRVA 51
+VA PEA A P SP+FS R+ P P TFP S+++
Sbjct: 3 SVAYEPEALAFDP-SPLFSQRVQRWEPGASKPNPDTFPFSKIS 44
>UniRef50_Q8Y221 Cluster: LPS-assembly protein precursor; n=7;
Burkholderiaceae|Rep: LPS-assembly protein precursor -
Ralstonia solanacearum (Pseudomonas solanacearum)
Length = 811
Score = 32.3 bits (70), Expect = 8.3
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = -3
Query: 317 SFQNRFVNTSTSSNNTDHASVLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPL 138
+FQ + S + NT V R F+ P S+ ++R + P + R RP
Sbjct: 445 NFQTDYTKFSIPTENT----VQGERLFMQPTISYPIIRPGWFVTPKFILNTTSYRLDRPT 500
Query: 137 SPIFSSRLHTMVPSVIAPTGITF 69
+S+++ +P+V +G+TF
Sbjct: 501 GDTQASQINRTLPTVSLDSGLTF 523
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,719,276
Number of Sequences: 1657284
Number of extensions: 13913435
Number of successful extensions: 43934
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 42009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43910
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -