Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30908
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.5  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 483 IAARRTGRIVEGKTDTKKET 542
           I ARRTGR V  + +T K T
Sbjct: 336 IRARRTGRKVSPRVNTIKHT 355


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 483 IAARRTGRIVEGKTDTKKET 542
           I ARRTGR V  + +T K T
Sbjct: 336 IRARRTGRKVSPRVNTIKHT 355


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 64  VGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFA 174
           VG  +      EG     L E +GD G+L  AS +FA
Sbjct: 91  VGTALTFCLQEEGGTTSQLIELLGDAGKLL-ASVHFA 126


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +3

Query: 162  WKLRHCDWTQS 194
            W   HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 242 TFLAPDGSFTLVR 204
           T   PDG FT++R
Sbjct: 579 TVTVPDGGFTIIR 591


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 420  DGYHHREDALQGSWQHHVHMASS 352
            D Y HR ++LQ   +++V   SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 420  DGYHHREDALQGSWQHHVHMASS 352
            D Y HR ++LQ   +++V   SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 420  DGYHHREDALQGSWQHHVHMASS 352
            D Y HR ++LQ   +++V   SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 420  DGYHHREDALQGSWQHHVHMASS 352
            D Y HR ++LQ   +++V   SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,474
Number of Sequences: 336
Number of extensions: 3409
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)