Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30908
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   184   2e-48
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         27   0.43 
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       27   0.57 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   1.7  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    24   4.0  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   5.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   7.1  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  184 bits (447), Expect = 2e-48
 Identities = 85/93 (91%), Positives = 85/93 (91%)
 Frame = +3

Query: 255 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 434
           NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGGNHQHIGK
Sbjct: 162 NRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGK 221

Query: 435 ASTVKRGTSAGRKVGLIAARRTGRIVEGKTDTK 533
           ASTVKRGT  GRKVGLIAARRTGRI  GK D K
Sbjct: 222 ASTVKRGTPPGRKVGLIAARRTGRIRGGKGDEK 254



 Score =  144 bits (350), Expect = 1e-36
 Identities = 63/86 (73%), Positives = 74/86 (86%)
 Frame = +1

Query: 7   SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
           +  +YTGQFVYCG++A L++GNV+P+G M EGTIVCNLEEK GDRG+LAR SGN+A+VI 
Sbjct: 79  AEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIA 138

Query: 187 HNPDAKRTRVKLPSGAKKVLPSRTEA 264
           HNPD KRTRVKLPSGAKKVLPS   A
Sbjct: 139 HNPDTKRTRVKLPSGAKKVLPSANRA 164


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.1 bits (57), Expect = 0.43
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 267 VGIVAGGGRIDKPILKAGRAYHK 335
           +G V GG   D  IL  GRAYH+
Sbjct: 87  LGAVVGGHTSDGEILYVGRAYHE 109


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 26.6 bits (56), Expect = 0.57
 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
 Frame = -2

Query: 171 EVSRGTCQTTSI--THFLFKIAHNGTLSHSSNRHHISNFKSCFLSTINKLACVEASG 7
           +V R   +TT I  THF FK  H         R     +  CF      + CV  SG
Sbjct: 172 DVLRTRVKTTGIVETHFSFKSIHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSG 228


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +2

Query: 251 QEQRHGRYCCWRWTY 295
           Q+Q+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -3

Query: 344 DLVLVVCPSSFQNRFVN-TSTSSNNTDHASVLDGRTFLAPDGS 219
           D V+ +  + ++N F    S + +  DH   L  R F  PDGS
Sbjct: 243 DQVVQLRDNLYKNSFATLVSIARHFPDHFDTLRQRLFKLPDGS 285


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 387 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQY 292
           GS  H     SSYV    CG P ++    C++
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH 535


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 301 LSIRPPPATIPTM 263
           + +RPPP  +PTM
Sbjct: 114 MGMRPPPMMVPTM 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,843
Number of Sequences: 2352
Number of extensions: 14504
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)