Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30908
(574 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 162 2e-40
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.015
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 31 0.44
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 29 2.3
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 29 2.3
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 29 2.3
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 29 2.3
AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 29 2.3
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 29 3.1
L14331-4|AAA28097.1| 352|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 28 5.4
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 27 7.2
L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 27 7.2
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 27 7.2
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z75955-13|CAB00113.2| 424|Caenorhabditis elegans Hypothetical p... 27 9.5
Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical pr... 27 9.5
U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical pr... 27 9.5
U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical pr... 27 9.5
U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical pr... 27 9.5
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 27 9.5
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 162 bits (393), Expect = 2e-40
Identities = 72/89 (80%), Positives = 78/89 (87%)
Frame = +3
Query: 255 NRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGK 434
NR M+G+VAGGGR DKP+LKAGR+YHKYK KRN WP VRGVAMNPVEHPHGGGNHQHIG
Sbjct: 162 NRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGH 221
Query: 435 ASTVKRGTSAGRKVGLIAARRTGRIVEGK 521
STV+R SAG+KVGLIAARRTGRI GK
Sbjct: 222 PSTVRRDASAGKKVGLIAARRTGRIRGGK 250
Score = 125 bits (302), Expect = 2e-29
Identities = 51/86 (59%), Positives = 70/86 (81%)
Frame = +1
Query: 7 SRSLYTGQFVYCGKKATLEVGNVMPVGAMTEGTIVCNLEEKMGDRGRLARASGNFATVIG 186
+ ++TGQF++CG KA +++GN++PVG + EGT +CN+E K GDRG +ARASGN+ATVI
Sbjct: 79 AEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIA 138
Query: 187 HNPDAKRTRVKLPSGAKKVLPSRTEA 264
HNPD K+TR++LPSGAKKV+ S A
Sbjct: 139 HNPDTKKTRIRLPSGAKKVVQSVNRA 164
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.015
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 67 GNVMPVGAMTEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 225
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 31.5 bits (68), Expect = 0.44
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 181 IGHNPDAKRTRVKLPSGAKKVLPSRTEAWSVLLLE 285
IGH D +RTR LP+G KKVL + +LL++
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVLVQNVKDLDMLLMQ 90
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 221 YRLEPRRFCHQEQRHGRYCCWR 286
YR+EP C QE H CWR
Sbjct: 892 YRMEPPHLCPQEVYHLMCSCWR 913
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 221 YRLEPRRFCHQEQRHGRYCCWR 286
YR+EP C QE H CWR
Sbjct: 892 YRMEPPHLCPQEVYHLMCSCWR 913
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 221 YRLEPRRFCHQEQRHGRYCCWR 286
YR+EP C QE H CWR
Sbjct: 892 YRMEPPHLCPQEVYHLMCSCWR 913
>Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical
protein F58A3.2b protein.
Length = 988
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 221 YRLEPRRFCHQEQRHGRYCCWR 286
YR+EP C QE H CWR
Sbjct: 839 YRMEPPHLCPQEVYHLMCSCWR 860
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 221 YRLEPRRFCHQEQRHGRYCCWR 286
YR+EP C QE H CWR
Sbjct: 891 YRMEPPHLCPQEVYHLMCSCWR 912
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 221 YRLEPRRFCHQEQRHGRYCCWR 286
YR+EP C QE H CWR
Sbjct: 891 YRMEPPHLCPQEVYHLMCSCWR 912
>AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein.
Length = 987
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 221 YRLEPRRFCHQEQRHGRYCCWR 286
YR+EP C QE H CWR
Sbjct: 838 YRMEPPHLCPQEVYHLMCSCWR 859
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -1
Query: 325 ALPAFKIGLSIRPPPATIPTMPLFL--MAEPSWLQTVAL 215
ALP++ S+ PPP +P+ P ++ ++ PS+ T ++
Sbjct: 95 ALPSYSTAYSMAPPPLILPSSPSYVAPVSAPSYSLTPSI 133
>L14331-4|AAA28097.1| 352|Caenorhabditis elegans Hypothetical
protein K12H4.3 protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 375 VAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIVEGKTDTK 533
V+ N + H G H +I K VK KV I A +T +V + DT+
Sbjct: 264 VSPNVIRREHRKGQHSYIEKQLAVKASNIKQAKVTEILAEKTVDLVGKEFDTQ 316
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 170 KFPEARARRPLSPIFSSRLHTMVPSVIAPT 81
K A+ARR L + S+ T VP V+ PT
Sbjct: 88 KLAAAKARRMLEDVARSKKMTEVPKVVVPT 117
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +3
Query: 327 YHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 461
Y+K++ + P++ ++ P +H G +GK+ T TS
Sbjct: 414 YNKHQNTHSSMPHIAHISSQPADHSFSGTLDARVGKSVTRDPSTS 458
>L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical
protein F09G8.2 protein.
Length = 367
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -2
Query: 249 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLSHSSNRHH 73
W +L+ + TL++ N SG+ TC +TS TH + ++ G L+ +S++ H
Sbjct: 234 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH 288
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -2
Query: 249 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLSHSSNRHH 73
W +L+ + TL++ N SG+ TC +TS TH + ++ G L+ +S++ H
Sbjct: 209 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH 263
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 292 RPPPATIPTMPLFLMAEPSWLQTVAL 215
RPP T+P+ L L+ EP+ +T+ +
Sbjct: 242 RPPTTTVPSTTLELITEPTSTETIPI 267
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 346 LTLYLWYALPAFKIGLSI-RPPPATIP 269
LT W+ +FK+ +++ RPPP +P
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMP 335
>Z75955-13|CAB00113.2| 424|Caenorhabditis elegans Hypothetical
protein R07B7.4 protein.
Length = 424
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 275 NTDHASVLDGRTFLAPDGSFTLVR 204
N+D+ S +DG FLA DG+ + +R
Sbjct: 105 NSDNLSTVDGDLFLACDGAHSSIR 128
>Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical
protein T11G6.2b protein.
Length = 495
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 149 RRPLSPIFSSRLHTMVPSVIAPTGITFPTSRVA 51
R+ LS + S +HT + + P G FP+ + A
Sbjct: 46 RKTLSTVKPSLIHTWISNTSTPDGPVFPSQQAA 78
>Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical
protein T11G6.2a protein.
Length = 502
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 149 RRPLSPIFSSRLHTMVPSVIAPTGITFPTSRVA 51
R+ LS + S +HT + + P G FP+ + A
Sbjct: 53 RKTLSTVKPSLIHTWISNTSTPDGPVFPSQQAA 85
>U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical
protein T27F7.2c protein.
Length = 331
Score = 27.1 bits (57), Expect = 9.5
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -3
Query: 296 NTSTSSNNTDHASVLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPIFSSR 117
NT+++ AS + FL GS T+ SG C R RRP+S +FSS
Sbjct: 5 NTASTMTEKRSASTVFLNRFLGKKGSQTVDE--SGQCK---------RKRRPVSAVFSSA 53
Query: 116 LHTMVPS 96
+H + S
Sbjct: 54 IHRLSSS 60
>U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical
protein T27F7.2b protein.
Length = 722
Score = 27.1 bits (57), Expect = 9.5
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -3
Query: 296 NTSTSSNNTDHASVLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPIFSSR 117
NT+++ AS + FL GS T+ SG C R RRP+S +FSS
Sbjct: 374 NTASTMTEKRSASTVFLNRFLGKKGSQTVDE--SGQCK---------RKRRPVSAVFSSA 422
Query: 116 LHTMVPS 96
+H + S
Sbjct: 423 IHRLSSS 429
>U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical
protein T27F7.2a protein.
Length = 732
Score = 27.1 bits (57), Expect = 9.5
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = -3
Query: 296 NTSTSSNNTDHASVLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPIFSSR 117
NT+++ AS + FL GS T+ SG C R RRP+S +FSS
Sbjct: 384 NTASTMTEKRSASTVFLNRFLGKKGSQTVDE--SGQCK---------RKRRPVSAVFSSA 432
Query: 116 LHTMVPS 96
+H + S
Sbjct: 433 IHRLSSS 439
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -1
Query: 346 LTLYLWYALPAFKIGLSI-RPPPATIP 269
LT W+ +FK+ +++ RPPP +P
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMP 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,481,733
Number of Sequences: 27780
Number of extensions: 320587
Number of successful extensions: 930
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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