Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30906
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7QFZ3 Cluster: Chromosome chr9 scaffold_90, whole geno...    35   2.2  
UniRef50_Q4V4D1 Cluster: IP10946p; n=2; Drosophila melanogaster|...    33   6.7  
UniRef50_A4R8T8 Cluster: Putative uncharacterized protein; n=3; ...    33   8.8  

>UniRef50_A7QFZ3 Cluster: Chromosome chr9 scaffold_90, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr9 scaffold_90, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 772

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 471 VPRCAKNLARGQSQKNEFFAIFSETVSFFAKLPQYKIV 584
           +P C  N+  G+   NEF+A F + + FF +  +Y ++
Sbjct: 490 IPHCFNNMTFGKRGANEFYAFFQDLIFFFQRHYEYAVL 527


>UniRef50_Q4V4D1 Cluster: IP10946p; n=2; Drosophila
           melanogaster|Rep: IP10946p - Drosophila melanogaster
           (Fruit fly)
          Length = 393

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 427 LFKTSL*RKSQKSSSFRGVLKIWHGVKVKKMSFLRFLAKR 546
           LF + L   ++KSS F G +K +H   ++ ++ L+FL K+
Sbjct: 288 LFSSLLTAPAEKSSRFDGYVKFYHDQLIENLNLLKFLGKK 327


>UniRef50_A4R8T8 Cluster: Putative uncharacterized protein; n=3;
           Sordariomycetes|Rep: Putative uncharacterized protein -
           Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 400

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 16/68 (23%), Positives = 32/68 (47%)
 Frame = +2

Query: 278 LFLCLLATQIFELNKSIWYSIKILCFNSNSPVYLHIQVYINSHKAEYWHSCSKHHYKENL 457
           L + +L  Q  E     W++  +L F++ + +Y+ +      + A Y H    + Y +N 
Sbjct: 307 LLVSILGGQNVEGESGQWWTGMLLLFSAGTFLYVAMHAMQEENTAAYEHHGGMNGYADNG 366

Query: 458 KSPHRSEV 481
            +PHR  +
Sbjct: 367 GAPHRKHI 374


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,451,726
Number of Sequences: 1657284
Number of extensions: 12656400
Number of successful extensions: 28324
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28302
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)